EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012064 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 27203 bases
Position: chrKN806709.1:18216-45418
Accession: 105922551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010624	DZF	PF07528.14	1.6e-70	1	1
ENSFHEP00000010596	zf-met	PF12874.7	3e-15	1	2
ENSFHEP00000010596	zf-met	PF12874.7	3e-15	2	2
ENSFHEP00000010624	zf-met	PF12874.7	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017386	-	1818	XM_012858445	ENSFHEP00000010624	605 (aa)	XP_012713899	-
ENSFHET00000031263	-	1506	-	ENSFHEP00000010596	501 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000012064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012064	zfr	52	46.224	ENSFHEG00000021667	-	52	45.690
ENSFHEG00000012064	zfr	51	56.135	ENSFHEG00000009438	ilf3b	50	54.955
ENSFHEG00000012064	zfr	94	51.860	ENSFHEG00000005422	zfr2	50	63.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012064	zfr	100	68.913	ENSG00000056097	ZFR	90	73.171	Homo_sapiens
ENSFHEG00000012064	zfr	94	77.572	ENSAPOG00000009740	zfr	60	73.975	Acanthochromis_polyacanthus
ENSFHEG00000012064	zfr	100	68.865	ENSAMEG00000006184	ZFR	54	73.595	Ailuropoda_melanoleuca
ENSFHEG00000012064	zfr	94	81.263	ENSACIG00000015926	zfr	65	78.899	Amphilophus_citrinellus
ENSFHEG00000012064	zfr	94	81.551	ENSAOCG00000013876	zfr	60	73.476	Amphiprion_ocellaris
ENSFHEG00000012064	zfr	100	77.225	ENSAPEG00000024383	zfr	61	78.963	Amphiprion_percula
ENSFHEG00000012064	zfr	94	83.824	ENSATEG00000010271	zfr	57	83.333	Anabas_testudineus
ENSFHEG00000012064	zfr	96	68.454	ENSAPLG00000015627	-	58	68.648	Anas_platyrhynchos
ENSFHEG00000012064	zfr	96	72.742	ENSACAG00000007880	ZFR	55	74.276	Anolis_carolinensis
ENSFHEG00000012064	zfr	100	68.913	ENSANAG00000023333	ZFR	55	73.810	Aotus_nancymaae
ENSFHEG00000012064	zfr	94	81.474	ENSACLG00000016832	zfr	61	80.851	Astatotilapia_calliptera
ENSFHEG00000012064	zfr	98	75.402	ENSAMXG00000019511	zfr	56	79.188	Astyanax_mexicanus
ENSFHEG00000012064	zfr	100	69.172	ENSBTAG00000008414	ZFR	54	73.935	Bos_taurus
ENSFHEG00000012064	zfr	100	68.913	ENSCJAG00000018740	ZFR	58	73.810	Callithrix_jacchus
ENSFHEG00000012064	zfr	100	66.208	ENSCAFG00000018886	ZFR	54	70.628	Canis_familiaris
ENSFHEG00000012064	zfr	100	69.018	ENSCAFG00020016859	-	58	73.765	Canis_lupus_dingo
ENSFHEG00000012064	zfr	100	69.172	ENSCHIG00000007710	ZFR	54	73.935	Capra_hircus
ENSFHEG00000012064	zfr	100	69.219	ENSTSYG00000010670	ZFR	56	73.810	Carlito_syrichta
ENSFHEG00000012064	zfr	100	61.588	ENSCAPG00000015655	ZFR	50	67.134	Cavia_aperea
ENSFHEG00000012064	zfr	100	62.323	ENSCPOG00000000862	ZFR	54	68.522	Cavia_porcellus
ENSFHEG00000012064	zfr	100	68.913	ENSCCAG00000024473	ZFR	56	73.810	Cebus_capucinus
ENSFHEG00000012064	zfr	99	71.270	ENSCATG00000038311	ZFR	55	73.810	Cercocebus_atys
ENSFHEG00000012064	zfr	100	68.760	ENSCLAG00000007408	ZFR	57	73.639	Chinchilla_lanigera
ENSFHEG00000012064	zfr	99	71.111	ENSCSAG00000017180	ZFR	54	74.527	Chlorocebus_sabaeus
ENSFHEG00000012064	zfr	92	64.167	ENSCHOG00000003848	ZFR	51	64.246	Choloepus_hoffmanni
ENSFHEG00000012064	zfr	95	72.833	ENSCPBG00000024211	ZFR	53	75.395	Chrysemys_picta_bellii
ENSFHEG00000012064	zfr	99	71.270	ENSCANG00000017807	ZFR	56	73.810	Colobus_angolensis_palliatus
ENSFHEG00000012064	zfr	100	69.278	ENSCGRG00001016009	Zfr	54	73.810	Cricetulus_griseus_chok1gshd
ENSFHEG00000012064	zfr	100	69.278	ENSCGRG00000001228	Zfr	55	73.810	Cricetulus_griseus_crigri
ENSFHEG00000012064	zfr	94	79.874	ENSCSEG00000009224	zfr	61	79.542	Cynoglossus_semilaevis
ENSFHEG00000012064	zfr	94	80.211	ENSCSEG00000011169	ZFR	65	76.308	Cynoglossus_semilaevis
ENSFHEG00000012064	zfr	100	80.395	ENSCVAG00000016494	zfr	62	83.987	Cyprinodon_variegatus
ENSFHEG00000012064	zfr	96	75.041	ENSDARG00000027109	zfr	55	79.074	Danio_rerio
ENSFHEG00000012064	zfr	100	69.924	ENSDNOG00000008852	ZFR	54	73.898	Dasypus_novemcinctus
ENSFHEG00000012064	zfr	100	69.385	ENSDORG00000016643	Zfr	54	74.150	Dipodomys_ordii
ENSFHEG00000012064	zfr	99	64.593	ENSETEG00000008937	ZFR	55	66.440	Echinops_telfairi
ENSFHEG00000012064	zfr	87	60.221	ENSEBUG00000012503	-	97	59.594	Eptatretus_burgeri
ENSFHEG00000012064	zfr	100	68.865	ENSEASG00005007104	ZFR	54	73.595	Equus_asinus_asinus
ENSFHEG00000012064	zfr	96	69.485	ENSECAG00000012851	ZFR	54	69.753	Equus_caballus
ENSFHEG00000012064	zfr	91	75.717	ENSELUG00000022743	zfr	59	75.497	Esox_lucius
ENSFHEG00000012064	zfr	100	69.018	ENSFCAG00000000354	ZFR	54	73.765	Felis_catus
ENSFHEG00000012064	zfr	96	72.937	ENSFALG00000002149	ZFR	56	74.744	Ficedula_albicollis
ENSFHEG00000012064	zfr	99	70.820	ENSFDAG00000012993	ZFR	55	73.639	Fukomys_damarensis
ENSFHEG00000012064	zfr	94	72.964	ENSGMOG00000003967	zfr	57	74.050	Gadus_morhua
ENSFHEG00000012064	zfr	96	72.937	ENSGALG00000003235	-	55	74.744	Gallus_gallus
ENSFHEG00000012064	zfr	99	69.841	ENSGALG00000034488	-	55	73.846	Gallus_gallus
ENSFHEG00000012064	zfr	96	85.417	ENSGAFG00000016229	zfr	57	96.899	Gambusia_affinis
ENSFHEG00000012064	zfr	94	81.184	ENSGACG00000005045	zfr	63	75.307	Gasterosteus_aculeatus
ENSFHEG00000012064	zfr	96	67.807	ENSGAGG00000013544	ZFR	50	73.372	Gopherus_agassizii
ENSFHEG00000012064	zfr	100	68.913	ENSGGOG00000016302	ZFR	55	73.810	Gorilla_gorilla
ENSFHEG00000012064	zfr	100	69.219	ENSHGLG00000008088	ZFR	55	74.355	Heterocephalus_glaber_female
ENSFHEG00000012064	zfr	100	69.219	ENSHGLG00100016776	ZFR	55	74.355	Heterocephalus_glaber_male
ENSFHEG00000012064	zfr	96	78.807	ENSHCOG00000001548	zfr	59	75.552	Hippocampus_comes
ENSFHEG00000012064	zfr	90	79.861	ENSIPUG00000008192	zfr	53	81.611	Ictalurus_punctatus
ENSFHEG00000012064	zfr	100	69.585	ENSSTOG00000008742	ZFR	56	74.150	Ictidomys_tridecemlineatus
ENSFHEG00000012064	zfr	100	64.253	ENSJJAG00000023064	Zfr	54	67.402	Jaculus_jaculus
ENSFHEG00000012064	zfr	94	82.316	ENSKMAG00000009468	zfr	54	78.692	Kryptolebias_marmoratus
ENSFHEG00000012064	zfr	90	84.293	ENSLBEG00000010783	zfr	54	84.737	Labrus_bergylta
ENSFHEG00000012064	zfr	99	69.280	ENSLACG00000000831	ZFR	55	71.959	Latimeria_chalumnae
ENSFHEG00000012064	zfr	92	78.401	ENSLOCG00000006727	zfr	53	79.117	Lepisosteus_oculatus
ENSFHEG00000012064	zfr	99	69.878	ENSLAFG00000002308	ZFR	58	73.559	Loxodonta_africana
ENSFHEG00000012064	zfr	99	71.270	ENSMFAG00000042691	ZFR	55	73.810	Macaca_fascicularis
ENSFHEG00000012064	zfr	99	71.270	ENSMMUG00000001317	ZFR	55	73.810	Macaca_mulatta
ENSFHEG00000012064	zfr	99	71.270	ENSMNEG00000029441	ZFR	58	73.810	Macaca_nemestrina
ENSFHEG00000012064	zfr	99	71.270	ENSMLEG00000028503	ZFR	57	73.810	Mandrillus_leucophaeus
ENSFHEG00000012064	zfr	100	78.963	ENSMAMG00000017351	zfr	61	81.342	Mastacembelus_armatus
ENSFHEG00000012064	zfr	94	81.474	ENSMZEG00005021243	zfr	61	80.851	Maylandia_zebra
ENSFHEG00000012064	zfr	96	68.454	ENSMGAG00000002841	ZFR	56	67.123	Meleagris_gallopavo
ENSFHEG00000012064	zfr	100	68.397	ENSMAUG00000000976	Zfr	54	73.639	Mesocricetus_auratus
ENSFHEG00000012064	zfr	100	69.066	ENSMICG00000001244	ZFR	54	73.639	Microcebus_murinus
ENSFHEG00000012064	zfr	100	69.954	ENSMOCG00000018630	Zfr	54	73.720	Microtus_ochrogaster
ENSFHEG00000012064	zfr	94	85.034	ENSMMOG00000012585	zfr	57	84.615	Mola_mola
ENSFHEG00000012064	zfr	95	71.383	ENSMODG00000020412	ZFR	52	77.518	Monodelphis_domestica
ENSFHEG00000012064	zfr	93	83.000	ENSMALG00000007123	zfr	57	82.529	Monopterus_albus
ENSFHEG00000012064	zfr	100	68.760	MGP_CAROLIEiJ_G0019681	Zfr	100	76.174	Mus_caroli
ENSFHEG00000012064	zfr	99	71.065	ENSMUSG00000022201	Zfr	99	76.174	Mus_musculus
ENSFHEG00000012064	zfr	100	68.913	MGP_PahariEiJ_G0016057	Zfr	100	75.839	Mus_pahari
ENSFHEG00000012064	zfr	100	69.207	MGP_SPRETEiJ_G0020574	Zfr	100	76.174	Mus_spretus
ENSFHEG00000012064	zfr	87	69.074	ENSMPUG00000015193	-	54	69.369	Mustela_putorius_furo
ENSFHEG00000012064	zfr	100	69.018	ENSMLUG00000011797	ZFR	56	74.483	Myotis_lucifugus
ENSFHEG00000012064	zfr	100	69.219	ENSNGAG00000018328	Zfr	54	74.150	Nannospalax_galili
ENSFHEG00000012064	zfr	94	81.263	ENSNBRG00000008378	zfr	61	76.020	Neolamprologus_brichardi
ENSFHEG00000012064	zfr	100	68.760	ENSNLEG00000014098	ZFR	57	73.639	Nomascus_leucogenys
ENSFHEG00000012064	zfr	99	71.224	ENSODEG00000001990	ZFR	57	73.810	Octodon_degus
ENSFHEG00000012064	zfr	99	70.998	ENSOANG00000014434	ZFR	56	74.188	Ornithorhynchus_anatinus
ENSFHEG00000012064	zfr	100	69.278	ENSOCUG00000016737	ZFR	54	73.980	Oryctolagus_cuniculus
ENSFHEG00000012064	zfr	92	84.201	ENSORLG00000017243	zfr	55	83.770	Oryzias_latipes
ENSFHEG00000012064	zfr	93	80.524	ENSORLG00020014823	zfr	57	80.428	Oryzias_latipes_hni
ENSFHEG00000012064	zfr	92	84.375	ENSORLG00015005801	zfr	53	83.944	Oryzias_latipes_hsok
ENSFHEG00000012064	zfr	100	75.794	ENSOMEG00000003336	zfr	57	80.033	Oryzias_melastigma
ENSFHEG00000012064	zfr	100	65.443	ENSOGAG00000015117	ZFR	54	69.610	Otolemur_garnettii
ENSFHEG00000012064	zfr	100	69.172	ENSOARG00000012233	ZFR	57	73.935	Ovis_aries
ENSFHEG00000012064	zfr	100	68.913	ENSPPAG00000027447	ZFR	57	73.810	Pan_paniscus
ENSFHEG00000012064	zfr	100	69.018	ENSPPRG00000008253	ZFR	54	73.765	Panthera_pardus
ENSFHEG00000012064	zfr	100	69.018	ENSPTIG00000010038	ZFR	55	73.765	Panthera_tigris_altaica
ENSFHEG00000012064	zfr	100	68.913	ENSPTRG00000016771	ZFR	55	73.810	Pan_troglodytes
ENSFHEG00000012064	zfr	99	71.270	ENSPANG00000003729	ZFR	56	73.810	Papio_anubis
ENSFHEG00000012064	zfr	99	70.305	ENSPKIG00000007596	ZFR	57	72.821	Paramormyrops_kingsleyae
ENSFHEG00000012064	zfr	92	79.897	ENSPKIG00000016781	ZFR	63	76.661	Paramormyrops_kingsleyae
ENSFHEG00000012064	zfr	86	77.615	ENSPSIG00000005779	ZFR	98	77.064	Pelodiscus_sinensis
ENSFHEG00000012064	zfr	82	84.646	ENSPMGG00000015984	zfr	51	82.937	Periophthalmus_magnuspinnatus
ENSFHEG00000012064	zfr	94	69.874	ENSPEMG00000014573	Zfr	52	70.856	Peromyscus_maniculatus_bairdii
ENSFHEG00000012064	zfr	64	55.963	ENSPMAG00000004100	-	90	54.599	Petromyzon_marinus
ENSFHEG00000012064	zfr	95	71.750	ENSPCIG00000020906	ZFR	55	77.917	Phascolarctos_cinereus
ENSFHEG00000012064	zfr	96	85.625	ENSPFOG00000005931	zfr	61	84.332	Poecilia_formosa
ENSFHEG00000012064	zfr	90	86.534	ENSPLAG00000001158	zfr	94	88.196	Poecilia_latipinna
ENSFHEG00000012064	zfr	93	87.633	ENSPMEG00000001926	zfr	95	88.913	Poecilia_mexicana
ENSFHEG00000012064	zfr	96	85.000	ENSPREG00000011947	zfr	61	83.410	Poecilia_reticulata
ENSFHEG00000012064	zfr	100	68.300	ENSPPYG00000015378	ZFR	56	73.129	Pongo_abelii
ENSFHEG00000012064	zfr	100	58.589	ENSPCAG00000007277	ZFR	54	62.181	Procavia_capensis
ENSFHEG00000012064	zfr	94	69.874	ENSPCOG00000000045	ZFR	52	72.097	Propithecus_coquereli
ENSFHEG00000012064	zfr	94	81.474	ENSPNYG00000006239	zfr	61	80.851	Pundamilia_nyererei
ENSFHEG00000012064	zfr	96	77.924	ENSPNAG00000025151	zfr	59	79.764	Pygocentrus_nattereri
ENSFHEG00000012064	zfr	99	70.973	ENSRNOG00000011627	Zfr	99	83.594	Rattus_norvegicus
ENSFHEG00000012064	zfr	99	71.270	ENSRBIG00000041561	ZFR	56	73.810	Rhinopithecus_bieti
ENSFHEG00000012064	zfr	99	71.270	ENSRROG00000044008	ZFR	56	73.810	Rhinopithecus_roxellana
ENSFHEG00000012064	zfr	100	68.913	ENSSBOG00000024150	ZFR	56	73.810	Saimiri_boliviensis_boliviensis
ENSFHEG00000012064	zfr	96	80.263	ENSSHAG00000015478	ZFR	54	77.738	Sarcophilus_harrisii
ENSFHEG00000012064	zfr	100	74.057	ENSSFOG00015017300	ZFR	56	78.425	Scleropages_formosus
ENSFHEG00000012064	zfr	86	71.071	ENSSFOG00015018366	zfr	93	71.882	Scleropages_formosus
ENSFHEG00000012064	zfr	100	76.162	ENSSMAG00000000320	zfr	61	80.032	Scophthalmus_maximus
ENSFHEG00000012064	zfr	94	83.438	ENSSDUG00000013882	zfr	57	82.190	Seriola_dumerili
ENSFHEG00000012064	zfr	94	83.229	ENSSLDG00000000762	zfr	61	82.516	Seriola_lalandi_dorsalis
ENSFHEG00000012064	zfr	99	72.115	ENSSPUG00000016786	ZFR	57	73.980	Sphenodon_punctatus
ENSFHEG00000012064	zfr	100	79.421	ENSSPAG00000019293	zfr	61	79.726	Stegastes_partitus
ENSFHEG00000012064	zfr	100	69.018	ENSSSCG00000027681	ZFR	58	73.765	Sus_scrofa
ENSFHEG00000012064	zfr	99	70.952	ENSTGUG00000001909	ZFR	55	74.490	Taeniopygia_guttata
ENSFHEG00000012064	zfr	94	81.224	ENSTRUG00000016620	zfr	57	80.263	Takifugu_rubripes
ENSFHEG00000012064	zfr	92	77.069	ENSTNIG00000018856	zfr	96	76.256	Tetraodon_nigroviridis
ENSFHEG00000012064	zfr	100	66.564	ENSTTRG00000017321	ZFR	54	70.187	Tursiops_truncatus
ENSFHEG00000012064	zfr	96	69.072	ENSUAMG00000000172	-	56	69.342	Ursus_americanus
ENSFHEG00000012064	zfr	96	69.072	ENSUMAG00000013805	-	56	69.342	Ursus_maritimus
ENSFHEG00000012064	zfr	100	69.172	ENSVPAG00000011011	ZFR	54	73.935	Vicugna_pacos
ENSFHEG00000012064	zfr	100	69.018	ENSVVUG00000022171	-	55	73.765	Vulpes_vulpes
ENSFHEG00000012064	zfr	92	74.828	ENSXETG00000015598	zfr	56	74.828	Xenopus_tropicalis
ENSFHEG00000012064	zfr	100	84.025	ENSXCOG00000009361	zfr	61	84.025	Xiphophorus_couchianus
ENSFHEG00000012064	zfr	100	84.485	ENSXMAG00000013356	zfr	58	85.299	Xiphophorus_maculatus