EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012186 (Gene tree)
Gene ID: -
Gene Symbol: CPSF3 (1 of many)
Alias: -
Full Name: cleavage and polyadenylation specific factor 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 21559 bases
Position: chrKN811343.1:1674530-1696088
Accession: 2326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010799	CPSF73-100_C	PF11718.8	4e-53	1	1
ENSFHEP00000010799	RMMBL	PF07521.12	9.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017609	CPSF3 (1 of many)-201	1110	-	ENSFHEP00000010799	369 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000012186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012186	CPSF3	100	66.341	ENSFHEG00000014774	cpsf3	58	66.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012186	CPSF3	99	68.780	ENSG00000119203	CPSF3	63	68.780	Homo_sapiens
ENSFHEG00000012186	CPSF3	100	67.073	ENSAPOG00000022087	cpsf3	58	67.073	Acanthochromis_polyacanthus
ENSFHEG00000012186	CPSF3	99	69.024	ENSAMEG00000008493	CPSF3	59	69.024	Ailuropoda_melanoleuca
ENSFHEG00000012186	CPSF3	100	65.693	ENSACIG00000009846	cpsf3	63	65.693	Amphilophus_citrinellus
ENSFHEG00000012186	CPSF3	100	78.537	ENSACIG00000023663	CPSF3	64	78.537	Amphilophus_citrinellus
ENSFHEG00000012186	CPSF3	100	80.000	ENSAOCG00000010077	CPSF3	59	80.000	Amphiprion_ocellaris
ENSFHEG00000012186	CPSF3	100	67.073	ENSAOCG00000022056	cpsf3	58	67.073	Amphiprion_ocellaris
ENSFHEG00000012186	CPSF3	100	80.000	ENSAPEG00000021167	CPSF3	59	80.000	Amphiprion_percula
ENSFHEG00000012186	CPSF3	100	67.073	ENSAPEG00000019526	cpsf3	63	65.366	Amphiprion_percula
ENSFHEG00000012186	CPSF3	100	67.805	ENSATEG00000014525	CPSF3	57	67.805	Anabas_testudineus
ENSFHEG00000012186	CPSF3	99	68.382	ENSATEG00000003959	cpsf3	63	67.157	Anabas_testudineus
ENSFHEG00000012186	CPSF3	99	69.438	ENSAPLG00000006941	CPSF3	59	69.438	Anas_platyrhynchos
ENSFHEG00000012186	CPSF3	99	65.937	ENSACAG00000001759	CPSF3	64	65.937	Anolis_carolinensis
ENSFHEG00000012186	CPSF3	99	60.000	ENSANAG00000031254	CPSF3	59	60.000	Aotus_nancymaae
ENSFHEG00000012186	CPSF3	100	78.780	ENSACLG00000018846	CPSF3	64	78.780	Astatotilapia_calliptera
ENSFHEG00000012186	CPSF3	98	92.308	ENSACLG00000014484	cpsf3	50	92.308	Astatotilapia_calliptera
ENSFHEG00000012186	CPSF3	100	68.780	ENSAMXG00000004786	cpsf3	63	67.397	Astyanax_mexicanus
ENSFHEG00000012186	CPSF3	99	69.024	ENSBTAG00000019735	CPSF3	59	69.024	Bos_taurus
ENSFHEG00000012186	CPSF3	99	68.537	ENSCJAG00000006276	CPSF3	60	68.537	Callithrix_jacchus
ENSFHEG00000012186	CPSF3	99	69.024	ENSCAFG00000003375	CPSF3	56	69.024	Canis_familiaris
ENSFHEG00000012186	CPSF3	82	70.435	ENSCAFG00020026799	CPSF3	55	70.435	Canis_lupus_dingo
ENSFHEG00000012186	CPSF3	99	69.024	ENSCHIG00000013973	CPSF3	59	69.024	Capra_hircus
ENSFHEG00000012186	CPSF3	99	68.780	ENSTSYG00000002967	CPSF3	59	68.780	Carlito_syrichta
ENSFHEG00000012186	CPSF3	99	69.756	ENSCAPG00000013851	CPSF3	61	69.756	Cavia_aperea
ENSFHEG00000012186	CPSF3	99	69.756	ENSCPOG00000011299	CPSF3	59	69.756	Cavia_porcellus
ENSFHEG00000012186	CPSF3	99	68.537	ENSCCAG00000036730	CPSF3	60	68.537	Cebus_capucinus
ENSFHEG00000012186	CPSF3	99	65.366	ENSCATG00000014770	CPSF3	52	73.267	Cercocebus_atys
ENSFHEG00000012186	CPSF3	99	69.512	ENSCLAG00000002727	CPSF3	59	69.512	Chinchilla_lanigera
ENSFHEG00000012186	CPSF3	99	75.339	ENSCSAG00000007125	CPSF3	56	75.339	Chlorocebus_sabaeus
ENSFHEG00000012186	CPSF3	99	68.537	ENSCPBG00000014074	CPSF3	59	68.537	Chrysemys_picta_bellii
ENSFHEG00000012186	CPSF3	99	49.034	ENSCING00000007214	-	58	49.034	Ciona_intestinalis
ENSFHEG00000012186	CPSF3	99	62.169	ENSCANG00000034435	CPSF3	61	62.169	Colobus_angolensis_palliatus
ENSFHEG00000012186	CPSF3	99	69.024	ENSCGRG00001013134	Cpsf3	59	69.024	Cricetulus_griseus_chok1gshd
ENSFHEG00000012186	CPSF3	99	69.024	ENSCGRG00000018319	Cpsf3	59	69.024	Cricetulus_griseus_crigri
ENSFHEG00000012186	CPSF3	100	74.453	ENSCSEG00000002021	CPSF3	63	74.453	Cynoglossus_semilaevis
ENSFHEG00000012186	CPSF3	100	81.463	ENSCVAG00000015067	CPSF3	59	81.463	Cyprinodon_variegatus
ENSFHEG00000012186	CPSF3	89	72.121	ENSCVAG00000022039	-	96	72.121	Cyprinodon_variegatus
ENSFHEG00000012186	CPSF3	100	70.244	ENSDARG00000027649	cpsf3	59	70.244	Danio_rerio
ENSFHEG00000012186	CPSF3	99	68.127	ENSDNOG00000008940	CPSF3	57	68.127	Dasypus_novemcinctus
ENSFHEG00000012186	CPSF3	91	68.783	ENSDORG00000014263	Cpsf3	57	68.783	Dipodomys_ordii
ENSFHEG00000012186	CPSF3	99	45.946	FBgn0261065	Cpsf73	58	45.946	Drosophila_melanogaster
ENSFHEG00000012186	CPSF3	91	68.435	ENSETEG00000003893	CPSF3	57	68.435	Echinops_telfairi
ENSFHEG00000012186	CPSF3	99	56.075	ENSEBUG00000009018	cpsf3	60	56.075	Eptatretus_burgeri
ENSFHEG00000012186	CPSF3	99	69.024	ENSEASG00005003970	CPSF3	59	69.024	Equus_asinus_asinus
ENSFHEG00000012186	CPSF3	99	69.024	ENSECAG00000019911	CPSF3	59	69.024	Equus_caballus
ENSFHEG00000012186	CPSF3	99	71.814	ENSELUG00000013775	cpsf3	63	71.324	Esox_lucius
ENSFHEG00000012186	CPSF3	99	69.024	ENSFCAG00000007852	CPSF3	63	69.024	Felis_catus
ENSFHEG00000012186	CPSF3	99	68.704	ENSFALG00000006572	CPSF3	63	68.704	Ficedula_albicollis
ENSFHEG00000012186	CPSF3	99	68.293	ENSFDAG00000006317	CPSF3	59	68.293	Fukomys_damarensis
ENSFHEG00000012186	CPSF3	100	69.512	ENSGMOG00000003157	cpsf3	59	69.512	Gadus_morhua
ENSFHEG00000012186	CPSF3	99	67.726	ENSGALG00000016424	CPSF3	64	67.726	Gallus_gallus
ENSFHEG00000012186	CPSF3	100	66.341	ENSGAFG00000019449	cpsf3	63	66.341	Gambusia_affinis
ENSFHEG00000012186	CPSF3	100	80.488	ENSGAFG00000008016	CPSF3	59	80.488	Gambusia_affinis
ENSFHEG00000012186	CPSF3	99	68.704	ENSGAGG00000025583	CPSF3	80	68.704	Gopherus_agassizii
ENSFHEG00000012186	CPSF3	99	68.780	ENSGGOG00000001757	CPSF3	64	68.780	Gorilla_gorilla
ENSFHEG00000012186	CPSF3	100	76.341	ENSHBUG00000014332	CPSF3	100	76.341	Haplochromis_burtoni
ENSFHEG00000012186	CPSF3	100	67.317	ENSHBUG00000001188	cpsf3	63	66.829	Haplochromis_burtoni
ENSFHEG00000012186	CPSF3	99	69.193	ENSHGLG00000000666	CPSF3	59	69.193	Heterocephalus_glaber_female
ENSFHEG00000012186	CPSF3	99	69.193	ENSHGLG00100007765	CPSF3	59	69.193	Heterocephalus_glaber_male
ENSFHEG00000012186	CPSF3	99	75.061	ENSHCOG00000015957	CPSF3	58	75.061	Hippocampus_comes
ENSFHEG00000012186	CPSF3	99	66.993	ENSHCOG00000007251	cpsf3	58	66.993	Hippocampus_comes
ENSFHEG00000012186	CPSF3	100	69.024	ENSIPUG00000023488	cpsf3	63	67.073	Ictalurus_punctatus
ENSFHEG00000012186	CPSF3	99	68.537	ENSSTOG00000004476	CPSF3	59	68.537	Ictidomys_tridecemlineatus
ENSFHEG00000012186	CPSF3	99	68.215	ENSJJAG00000023415	Cpsf3	59	68.215	Jaculus_jaculus
ENSFHEG00000012186	CPSF3	100	66.505	ENSKMAG00000002806	cpsf3	58	66.505	Kryptolebias_marmoratus
ENSFHEG00000012186	CPSF3	100	80.244	ENSKMAG00000007317	CPSF3	59	80.244	Kryptolebias_marmoratus
ENSFHEG00000012186	CPSF3	91	68.435	ENSLBEG00000015018	-	99	68.435	Labrus_bergylta
ENSFHEG00000012186	CPSF3	99	61.558	ENSLBEG00000020569	cpsf3	52	61.558	Labrus_bergylta
ENSFHEG00000012186	CPSF3	91	79.310	ENSLBEG00000013492	CPSF3	56	79.310	Labrus_bergylta
ENSFHEG00000012186	CPSF3	100	61.081	ENSLACG00000008308	CPSF3	56	61.081	Latimeria_chalumnae
ENSFHEG00000012186	CPSF3	100	69.756	ENSLOCG00000016823	cpsf3	59	69.756	Lepisosteus_oculatus
ENSFHEG00000012186	CPSF3	99	68.537	ENSLAFG00000009467	CPSF3	60	68.537	Loxodonta_africana
ENSFHEG00000012186	CPSF3	99	68.537	ENSMFAG00000001339	CPSF3	63	68.537	Macaca_fascicularis
ENSFHEG00000012186	CPSF3	99	68.537	ENSMMUG00000018038	CPSF3	63	68.537	Macaca_mulatta
ENSFHEG00000012186	CPSF3	88	75.617	ENSMNEG00000039447	CPSF3	51	75.617	Macaca_nemestrina
ENSFHEG00000012186	CPSF3	99	68.780	ENSMLEG00000026825	CPSF3	59	68.780	Mandrillus_leucophaeus
ENSFHEG00000012186	CPSF3	99	67.647	ENSMAMG00000003076	cpsf3	58	67.647	Mastacembelus_armatus
ENSFHEG00000012186	CPSF3	100	78.883	ENSMAMG00000008835	CPSF3	63	78.883	Mastacembelus_armatus
ENSFHEG00000012186	CPSF3	100	67.317	ENSMZEG00005014358	cpsf3	63	66.829	Maylandia_zebra
ENSFHEG00000012186	CPSF3	100	79.024	ENSMZEG00005006258	CPSF3	64	78.780	Maylandia_zebra
ENSFHEG00000012186	CPSF3	99	67.726	ENSMGAG00000013995	CPSF3	61	67.726	Meleagris_gallopavo
ENSFHEG00000012186	CPSF3	88	76.235	ENSMAUG00000000166	Cpsf3	85	76.235	Mesocricetus_auratus
ENSFHEG00000012186	CPSF3	99	64.059	ENSMICG00000002363	CPSF3	63	64.059	Microcebus_murinus
ENSFHEG00000012186	CPSF3	99	64.390	ENSMOCG00000020067	Cpsf3	57	64.390	Microtus_ochrogaster
ENSFHEG00000012186	CPSF3	100	47.906	ENSMMOG00000011923	CPSF3	63	46.719	Mola_mola
ENSFHEG00000012186	CPSF3	99	61.029	ENSMMOG00000018212	CPSF3	60	61.029	Mola_mola
ENSFHEG00000012186	CPSF3	99	67.470	ENSMODG00000014703	CPSF3	60	67.470	Monodelphis_domestica
ENSFHEG00000012186	CPSF3	99	68.873	ENSMALG00000016416	cpsf3	63	66.748	Monopterus_albus
ENSFHEG00000012186	CPSF3	100	75.366	ENSMALG00000011474	CPSF3	62	75.366	Monopterus_albus
ENSFHEG00000012186	CPSF3	99	68.537	MGP_CAROLIEiJ_G0017640	Cpsf3	59	68.537	Mus_caroli
ENSFHEG00000012186	CPSF3	99	68.537	ENSMUSG00000054309	Cpsf3	59	68.537	Mus_musculus
ENSFHEG00000012186	CPSF3	99	68.293	MGP_PahariEiJ_G0029397	Cpsf3	59	68.293	Mus_pahari
ENSFHEG00000012186	CPSF3	99	68.537	MGP_SPRETEiJ_G0018481	Cpsf3	59	68.537	Mus_spretus
ENSFHEG00000012186	CPSF3	99	68.949	ENSMPUG00000013213	CPSF3	59	68.949	Mustela_putorius_furo
ENSFHEG00000012186	CPSF3	99	69.343	ENSMLUG00000010636	CPSF3	59	69.343	Myotis_lucifugus
ENSFHEG00000012186	CPSF3	99	68.780	ENSNGAG00000019836	Cpsf3	59	68.780	Nannospalax_galili
ENSFHEG00000012186	CPSF3	98	94.595	ENSNBRG00000004770	cpsf3	63	66.585	Neolamprologus_brichardi
ENSFHEG00000012186	CPSF3	100	78.780	ENSNBRG00000010525	CPSF3	64	78.780	Neolamprologus_brichardi
ENSFHEG00000012186	CPSF3	99	68.537	ENSNLEG00000013359	CPSF3	63	68.537	Nomascus_leucogenys
ENSFHEG00000012186	CPSF3	99	69.512	ENSODEG00000003129	CPSF3	59	69.512	Octodon_degus
ENSFHEG00000012186	CPSF3	100	68.049	ENSONIG00000018812	cpsf3	58	68.049	Oreochromis_niloticus
ENSFHEG00000012186	CPSF3	99	69.024	ENSOANG00000008577	CPSF3	72	69.024	Ornithorhynchus_anatinus
ENSFHEG00000012186	CPSF3	99	69.024	ENSOCUG00000003728	CPSF3	59	69.024	Oryctolagus_cuniculus
ENSFHEG00000012186	CPSF3	100	65.366	ENSORLG00000018854	cpsf3	58	65.366	Oryzias_latipes
ENSFHEG00000012186	CPSF3	100	65.610	ENSORLG00020013331	cpsf3	63	63.415	Oryzias_latipes_hni
ENSFHEG00000012186	CPSF3	100	65.366	ENSORLG00015011017	cpsf3	63	63.415	Oryzias_latipes_hsok
ENSFHEG00000012186	CPSF3	100	65.610	ENSOMEG00000010647	cpsf3	56	65.610	Oryzias_melastigma
ENSFHEG00000012186	CPSF3	99	59.268	ENSOGAG00000001680	CPSF3	59	59.268	Otolemur_garnettii
ENSFHEG00000012186	CPSF3	99	69.024	ENSOARG00000015073	CPSF3	59	69.024	Ovis_aries
ENSFHEG00000012186	CPSF3	99	68.780	ENSPPAG00000042457	CPSF3	59	68.780	Pan_paniscus
ENSFHEG00000012186	CPSF3	99	68.537	ENSPPRG00000016790	CPSF3	63	68.537	Panthera_pardus
ENSFHEG00000012186	CPSF3	99	68.537	ENSPTIG00000003920	CPSF3	64	68.537	Panthera_tigris_altaica
ENSFHEG00000012186	CPSF3	99	68.780	ENSPTRG00000011638	CPSF3	59	68.780	Pan_troglodytes
ENSFHEG00000012186	CPSF3	99	68.537	ENSPANG00000016798	CPSF3	59	68.537	Papio_anubis
ENSFHEG00000012186	CPSF3	100	71.776	ENSPKIG00000023646	cpsf3	64	71.463	Paramormyrops_kingsleyae
ENSFHEG00000012186	CPSF3	99	68.537	ENSPSIG00000016144	CPSF3	59	68.537	Pelodiscus_sinensis
ENSFHEG00000012186	CPSF3	100	75.610	ENSPMGG00000015311	CPSF3	100	75.610	Periophthalmus_magnuspinnatus
ENSFHEG00000012186	CPSF3	83	68.966	ENSPMGG00000006141	-	59	68.966	Periophthalmus_magnuspinnatus
ENSFHEG00000012186	CPSF3	99	69.268	ENSPEMG00000017668	Cpsf3	59	69.268	Peromyscus_maniculatus_bairdii
ENSFHEG00000012186	CPSF3	99	68.215	ENSPCIG00000009823	CPSF3	60	68.215	Phascolarctos_cinereus
ENSFHEG00000012186	CPSF3	100	65.610	ENSPFOG00000015922	cpsf3	58	65.610	Poecilia_formosa
ENSFHEG00000012186	CPSF3	100	80.244	ENSPFOG00000010418	-	59	80.244	Poecilia_formosa
ENSFHEG00000012186	CPSF3	100	65.610	ENSPLAG00000000882	cpsf3	58	65.610	Poecilia_latipinna
ENSFHEG00000012186	CPSF3	100	80.244	ENSPLAG00000021300	-	100	80.244	Poecilia_latipinna
ENSFHEG00000012186	CPSF3	50	75.893	ENSPMEG00000021555	CPSF3	88	75.893	Poecilia_mexicana
ENSFHEG00000012186	CPSF3	100	65.610	ENSPMEG00000018309	cpsf3	58	65.610	Poecilia_mexicana
ENSFHEG00000012186	CPSF3	100	65.854	ENSPREG00000014875	cpsf3	63	65.854	Poecilia_reticulata
ENSFHEG00000012186	CPSF3	100	67.805	ENSPREG00000004482	CPSF3	56	67.805	Poecilia_reticulata
ENSFHEG00000012186	CPSF3	99	68.537	ENSPPYG00000012666	CPSF3	62	68.537	Pongo_abelii
ENSFHEG00000012186	CPSF3	99	68.704	ENSPVAG00000005324	CPSF3	59	68.704	Pteropus_vampyrus
ENSFHEG00000012186	CPSF3	100	67.317	ENSPNYG00000004405	cpsf3	63	66.829	Pundamilia_nyererei
ENSFHEG00000012186	CPSF3	75	80.757	ENSPNYG00000021047	CPSF3	53	80.757	Pundamilia_nyererei
ENSFHEG00000012186	CPSF3	100	69.268	ENSPNAG00000023060	cpsf3	64	69.268	Pygocentrus_nattereri
ENSFHEG00000012186	CPSF3	100	68.127	ENSRNOG00000052418	Cpsf3	59	68.127	Rattus_norvegicus
ENSFHEG00000012186	CPSF3	99	63.659	ENSRBIG00000041615	CPSF3	61	63.659	Rhinopithecus_bieti
ENSFHEG00000012186	CPSF3	99	68.780	ENSRROG00000033792	CPSF3	60	68.780	Rhinopithecus_roxellana
ENSFHEG00000012186	CPSF3	99	63.171	ENSSBOG00000027263	CPSF3	59	63.171	Saimiri_boliviensis_boliviensis
ENSFHEG00000012186	CPSF3	99	68.460	ENSSHAG00000007024	CPSF3	59	68.460	Sarcophilus_harrisii
ENSFHEG00000012186	CPSF3	100	72.087	ENSSFOG00015002108	cpsf3	64	72.087	Scleropages_formosus
ENSFHEG00000012186	CPSF3	91	75.332	ENSSMAG00000020534	CPSF3	54	75.332	Scophthalmus_maximus
ENSFHEG00000012186	CPSF3	100	79.756	ENSSDUG00000018498	CPSF3	64	79.268	Seriola_dumerili
ENSFHEG00000012186	CPSF3	100	67.805	ENSSDUG00000002828	cpsf3	57	67.805	Seriola_dumerili
ENSFHEG00000012186	CPSF3	100	68.049	ENSSLDG00000008469	cpsf3	57	68.049	Seriola_lalandi_dorsalis
ENSFHEG00000012186	CPSF3	100	79.756	ENSSLDG00000005234	CPSF3	63	78.537	Seriola_lalandi_dorsalis
ENSFHEG00000012186	CPSF3	99	66.748	ENSSPUG00000015525	CPSF3	59	66.748	Sphenodon_punctatus
ENSFHEG00000012186	CPSF3	100	68.049	ENSSPAG00000018579	cpsf3	58	68.049	Stegastes_partitus
ENSFHEG00000012186	CPSF3	100	79.268	ENSSPAG00000002906	CPSF3	63	78.049	Stegastes_partitus
ENSFHEG00000012186	CPSF3	99	69.024	ENSSSCG00000020799	CPSF3	64	69.024	Sus_scrofa
ENSFHEG00000012186	CPSF3	99	68.460	ENSTGUG00000013016	CPSF3	59	68.460	Taeniopygia_guttata
ENSFHEG00000012186	CPSF3	100	64.964	ENSTRUG00000013905	CPSF3	100	64.964	Takifugu_rubripes
ENSFHEG00000012186	CPSF3	99	66.422	ENSTRUG00000007030	cpsf3	97	65.196	Takifugu_rubripes
ENSFHEG00000012186	CPSF3	99	65.526	ENSUAMG00000007535	CPSF3	58	65.526	Ursus_americanus
ENSFHEG00000012186	CPSF3	99	69.024	ENSUMAG00000003676	CPSF3	63	69.024	Ursus_maritimus
ENSFHEG00000012186	CPSF3	91	66.844	ENSVPAG00000008041	CPSF3	59	66.844	Vicugna_pacos
ENSFHEG00000012186	CPSF3	99	69.024	ENSVVUG00000002194	CPSF3	59	69.024	Vulpes_vulpes
ENSFHEG00000012186	CPSF3	99	65.037	ENSXETG00000008263	cpsf3	58	65.037	Xenopus_tropicalis
ENSFHEG00000012186	CPSF3	88	89.815	ENSXCOG00000000957	-	75	89.815	Xiphophorus_couchianus
ENSFHEG00000012186	CPSF3	100	66.098	ENSXCOG00000019695	cpsf3	58	66.098	Xiphophorus_couchianus
ENSFHEG00000012186	CPSF3	99	100.000	ENSXMAG00000027291	CPSF3	59	80.244	Xiphophorus_maculatus
ENSFHEG00000012186	CPSF3	100	65.366	ENSXMAG00000009784	cpsf3	62	65.366	Xiphophorus_maculatus