EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012352 (Gene tree)
Gene ID: 105918756
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 7357 bases
Position: chrKN805533.1:213399-220755
Accession: 105918756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010940	MMR_HSR1	PF01926.23	5.7e-06	1	1
ENSFHEP00000010947	MMR_HSR1	PF01926.23	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000031423	-	4047	XM_012853913	ENSFHEP00000010940	198 (aa)	XP_012709367	A0A147B5U8
ENSFHET00000017807	-	4116	-	ENSFHEP00000010947	221 (aa)	-	A0A146Z8E1

Gene Model

Click here to download ENSFHEG00000012352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012352	-	54	32.258	ENSFHEG00000016231	arl5a	69	32.258
ENSFHEG00000012352	-	93	31.892	ENSFHEG00000004171	arl1	91	31.892
ENSFHEG00000012352	-	91	31.522	ENSFHEG00000000850	ARL6	92	31.522
ENSFHEG00000012352	-	60	32.576	ENSFHEG00000013677	arl5c	74	32.576
ENSFHEG00000012352	-	72	36.000	ENSFHEG00000013017	-	81	34.320
ENSFHEG00000012352	-	65	32.886	ENSFHEG00000009894	arl4cb	73	32.886
ENSFHEG00000012352	-	91	30.939	ENSFHEG00000005859	-	94	30.939
ENSFHEG00000012352	-	56	40.870	ENSFHEG00000009487	arl4aa	58	40.870
ENSFHEG00000012352	-	84	34.132	ENSFHEG00000019659	-	87	34.132
ENSFHEG00000012352	-	50	36.937	ENSFHEG00000018216	-	55	36.937
ENSFHEG00000012352	-	66	31.507	ENSFHEG00000008118	arf3b	75	31.507
ENSFHEG00000012352	-	100	83.838	ENSFHEG00000019865	sar1b	100	83.838
ENSFHEG00000012352	-	65	33.793	ENSFHEG00000019579	arl8bb	65	33.793
ENSFHEG00000012352	-	68	34.532	ENSFHEG00000018721	arl14	69	34.532
ENSFHEG00000012352	-	89	32.222	ENSFHEG00000009562	-	85	32.222
ENSFHEG00000012352	-	70	36.957	ENSFHEG00000005294	arl2	80	36.957
ENSFHEG00000012352	-	67	34.307	ENSFHEG00000016443	ARL10	61	34.307
ENSFHEG00000012352	-	91	30.387	ENSFHEG00000019002	arf2b	93	30.387
ENSFHEG00000012352	-	73	33.793	ENSFHEG00000020247	arl8ba	69	35.156
ENSFHEG00000012352	-	66	31.507	ENSFHEG00000023396	-	75	31.507
ENSFHEG00000012352	-	91	30.645	ENSFHEG00000011714	-	96	30.645
ENSFHEG00000012352	-	87	30.286	ENSFHEG00000023119	arf5	89	30.286
ENSFHEG00000012352	-	56	35.135	ENSFHEG00000010692	arl3	55	35.135
ENSFHEG00000012352	-	100	80.808	ENSFHEG00000021773	sar1ab	100	80.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012352	-	100	78.283	ENSACIG00000019827	sar1ab	100	78.283	Amphilophus_citrinellus
ENSFHEG00000012352	-	100	79.798	ENSAOCG00000022062	sar1ab	100	79.798	Amphiprion_ocellaris
ENSFHEG00000012352	-	100	79.798	ENSAPEG00000011525	sar1ab	100	79.798	Amphiprion_percula
ENSFHEG00000012352	-	100	82.828	ENSATEG00000003466	sar1ab	100	82.828	Anabas_testudineus
ENSFHEG00000012352	-	100	77.273	ENSACLG00000013053	sar1ab	100	77.273	Astatotilapia_calliptera
ENSFHEG00000012352	-	100	82.323	ENSCSEG00000004825	sar1ab	100	82.323	Cynoglossus_semilaevis
ENSFHEG00000012352	-	100	95.455	ENSCVAG00000006500	-	100	95.455	Cyprinodon_variegatus
ENSFHEG00000012352	-	100	79.798	ENSCVAG00000015162	sar1ab	100	79.798	Cyprinodon_variegatus
ENSFHEG00000012352	-	100	81.818	ENSDARG00000033320	sar1ab	100	81.818	Danio_rerio
ENSFHEG00000012352	-	100	88.384	ENSELUG00000013652	sar1a	100	88.384	Esox_lucius
ENSFHEG00000012352	-	100	81.818	ENSELUG00000024279	sar1ab	100	81.818	Esox_lucius
ENSFHEG00000012352	-	100	80.303	ENSGMOG00000012588	sar1ab	100	80.303	Gadus_morhua
ENSFHEG00000012352	-	100	79.798	ENSGAFG00000009702	sar1ab	100	79.798	Gambusia_affinis
ENSFHEG00000012352	-	100	97.475	ENSGAFG00000004846	-	100	97.475	Gambusia_affinis
ENSFHEG00000012352	-	100	81.818	ENSGACG00000008616	sar1ab	100	81.818	Gasterosteus_aculeatus
ENSFHEG00000012352	-	100	77.778	ENSHBUG00000021221	sar1ab	100	77.778	Haplochromis_burtoni
ENSFHEG00000012352	-	100	80.303	ENSHCOG00000002845	sar1ab	80	80.303	Hippocampus_comes
ENSFHEG00000012352	-	100	78.788	ENSKMAG00000018006	sar1ab	100	78.788	Kryptolebias_marmoratus
ENSFHEG00000012352	-	100	82.323	ENSLBEG00000001114	sar1ab	100	82.323	Labrus_bergylta
ENSFHEG00000012352	-	100	81.313	ENSMAMG00000021314	sar1ab	100	81.313	Mastacembelus_armatus
ENSFHEG00000012352	-	100	77.273	ENSMZEG00005027606	sar1ab	100	77.273	Maylandia_zebra
ENSFHEG00000012352	-	100	82.323	ENSMMOG00000010360	sar1ab	100	82.323	Mola_mola
ENSFHEG00000012352	-	100	79.798	ENSMALG00000005831	sar1ab	100	79.798	Monopterus_albus
ENSFHEG00000012352	-	100	77.778	ENSNBRG00000018772	sar1ab	100	77.778	Neolamprologus_brichardi
ENSFHEG00000012352	-	100	78.788	ENSONIG00000018509	sar1ab	100	78.788	Oreochromis_niloticus
ENSFHEG00000012352	-	100	88.889	ENSORLG00000009132	-	90	88.889	Oryzias_latipes
ENSFHEG00000012352	-	100	80.808	ENSORLG00000006779	sar1ab	67	80.808	Oryzias_latipes
ENSFHEG00000012352	-	100	81.313	ENSORLG00020005458	sar1ab	100	81.313	Oryzias_latipes_hni
ENSFHEG00000012352	-	100	88.889	ENSORLG00020007024	-	90	88.889	Oryzias_latipes_hni
ENSFHEG00000012352	-	100	80.808	ENSORLG00015010542	sar1ab	100	80.808	Oryzias_latipes_hsok
ENSFHEG00000012352	-	100	89.394	ENSORLG00015006223	-	94	93.750	Oryzias_latipes_hsok
ENSFHEG00000012352	-	100	81.313	ENSOMEG00000004948	sar1ab	100	81.313	Oryzias_melastigma
ENSFHEG00000012352	-	100	88.384	ENSOMEG00000012020	-	100	88.384	Oryzias_melastigma
ENSFHEG00000012352	-	100	83.333	ENSPKIG00000007615	sar1ab	100	83.333	Paramormyrops_kingsleyae
ENSFHEG00000012352	-	100	82.828	ENSPMGG00000013330	sar1ab	100	82.828	Periophthalmus_magnuspinnatus
ENSFHEG00000012352	-	100	80.303	ENSPFOG00000023432	sar1ab	100	80.303	Poecilia_formosa
ENSFHEG00000012352	-	100	80.808	ENSPLAG00000023705	sar1ab	100	80.808	Poecilia_latipinna
ENSFHEG00000012352	-	100	80.303	ENSPMEG00000000559	sar1ab	100	80.303	Poecilia_mexicana
ENSFHEG00000012352	-	100	96.970	ENSPMEG00000001717	-	100	96.970	Poecilia_mexicana
ENSFHEG00000012352	-	100	80.303	ENSPREG00000016098	sar1ab	100	80.303	Poecilia_reticulata
ENSFHEG00000012352	-	100	77.778	ENSPNYG00000011603	sar1ab	100	77.778	Pundamilia_nyererei
ENSFHEG00000012352	-	100	82.323	ENSPNAG00000008007	sar1ab	100	82.323	Pygocentrus_nattereri
ENSFHEG00000012352	-	100	86.869	ENSSFOG00015014010	sar1a	100	86.869	Scleropages_formosus
ENSFHEG00000012352	-	58	84.348	ENSSMAG00000020758	sar1ab	83	84.348	Scophthalmus_maximus
ENSFHEG00000012352	-	100	81.818	ENSSDUG00000010773	sar1ab	100	81.818	Seriola_dumerili
ENSFHEG00000012352	-	100	81.818	ENSSLDG00000025558	sar1ab	100	81.818	Seriola_lalandi_dorsalis
ENSFHEG00000012352	-	100	80.303	ENSSPAG00000009194	sar1ab	100	80.303	Stegastes_partitus
ENSFHEG00000012352	-	100	80.808	ENSTRUG00000007269	sar1ab	100	80.808	Takifugu_rubripes
ENSFHEG00000012352	-	100	79.798	ENSTNIG00000008635	sar1ab	100	79.798	Tetraodon_nigroviridis
ENSFHEG00000012352	-	100	80.303	ENSXMAG00000003130	sar1ab	100	80.303	Xiphophorus_maculatus
ENSFHEG00000012352	-	100	97.980	ENSXMAG00000026223	SAR1A	100	97.980	Xiphophorus_maculatus