EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012420 (Gene tree)
Gene ID: 105925411
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 21729 bases
Position: chrKN811284.1:1250547-1272275
Accession: 105925411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028315	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017789	-	2568	-	ENSFHEP00000028319	855 (aa)	-	-
ENSFHET00000017820	-	5546	XM_012861253	ENSFHEP00000028315	1002 (aa)	XP_012716707	-

Gene Model

Click here to download ENSFHEG00000012420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012420	chd1l	54	37.258	ENSFHEG00000022950	hells	81	38.316
ENSFHEG00000012420	chd1l	54	41.575	ENSFHEG00000007687	smarca5	58	41.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012420	chd1l	85	64.385	ENSG00000131778	CHD1L	99	63.607	Homo_sapiens
ENSFHEG00000012420	chd1l	97	82.957	ENSAPOG00000001539	chd1l	99	85.284	Acanthochromis_polyacanthus
ENSFHEG00000012420	chd1l	87	63.501	ENSAMEG00000017063	CHD1L	97	63.230	Ailuropoda_melanoleuca
ENSFHEG00000012420	chd1l	84	82.450	ENSACIG00000001164	chd1l	99	81.078	Amphilophus_citrinellus
ENSFHEG00000012420	chd1l	100	82.054	ENSAOCG00000014510	chd1l	99	82.388	Amphiprion_ocellaris
ENSFHEG00000012420	chd1l	90	79.689	ENSAPEG00000017450	chd1l	99	79.578	Amphiprion_percula
ENSFHEG00000012420	chd1l	86	81.503	ENSAPEG00000017573	chd1l	95	81.734	Amphiprion_percula
ENSFHEG00000012420	chd1l	100	80.297	ENSATEG00000013058	chd1l	99	79.901	Anabas_testudineus
ENSFHEG00000012420	chd1l	84	63.550	ENSAPLG00000009976	CHD1L	95	62.674	Anas_platyrhynchos
ENSFHEG00000012420	chd1l	85	61.345	ENSACAG00000017686	CHD1L	98	60.134	Anolis_carolinensis
ENSFHEG00000012420	chd1l	84	64.824	ENSANAG00000024347	CHD1L	96	63.230	Aotus_nancymaae
ENSFHEG00000012420	chd1l	94	81.474	ENSACLG00000019304	chd1l	96	81.494	Astatotilapia_calliptera
ENSFHEG00000012420	chd1l	100	59.921	ENSAMXG00000012367	chd1l	99	60.338	Astyanax_mexicanus
ENSFHEG00000012420	chd1l	85	63.785	ENSBTAG00000020831	CHD1L	95	63.668	Bos_taurus
ENSFHEG00000012420	chd1l	85	63.763	ENSCJAG00000002406	CHD1L	97	62.743	Callithrix_jacchus
ENSFHEG00000012420	chd1l	87	61.143	ENSCAFG00000010944	CHD1L	97	60.984	Canis_familiaris
ENSFHEG00000012420	chd1l	87	62.870	ENSCAFG00020020121	CHD1L	97	62.756	Canis_lupus_dingo
ENSFHEG00000012420	chd1l	87	62.874	ENSCHIG00000013871	CHD1L	96	63.668	Capra_hircus
ENSFHEG00000012420	chd1l	83	64.636	ENSTSYG00000003005	CHD1L	99	63.455	Carlito_syrichta
ENSFHEG00000012420	chd1l	86	61.468	ENSCPOG00000009000	CHD1L	98	60.658	Cavia_porcellus
ENSFHEG00000012420	chd1l	85	61.556	ENSCCAG00000036079	CHD1L	96	62.944	Cebus_capucinus
ENSFHEG00000012420	chd1l	85	64.070	ENSCATG00000031044	CHD1L	97	63.001	Cercocebus_atys
ENSFHEG00000012420	chd1l	85	63.477	ENSCLAG00000000880	CHD1L	97	62.743	Chinchilla_lanigera
ENSFHEG00000012420	chd1l	85	64.186	ENSCSAG00000018386	CHD1L	97	63.230	Chlorocebus_sabaeus
ENSFHEG00000012420	chd1l	85	65.299	ENSCPBG00000002600	CHD1L	98	64.032	Chrysemys_picta_bellii
ENSFHEG00000012420	chd1l	85	63.256	ENSCANG00000020239	CHD1L	97	62.258	Colobus_angolensis_palliatus
ENSFHEG00000012420	chd1l	85	64.637	ENSCGRG00001021624	Chd1l	98	63.835	Cricetulus_griseus_chok1gshd
ENSFHEG00000012420	chd1l	82	65.181	ENSCGRG00000007554	Chd1l	99	64.345	Cricetulus_griseus_crigri
ENSFHEG00000012420	chd1l	94	85.189	ENSCVAG00000002595	chd1l	97	84.874	Cyprinodon_variegatus
ENSFHEG00000012420	chd1l	100	69.171	ENSDARG00000015471	chd1l	99	70.177	Danio_rerio
ENSFHEG00000012420	chd1l	87	63.918	ENSDNOG00000019504	CHD1L	97	63.803	Dasypus_novemcinctus
ENSFHEG00000012420	chd1l	87	61.818	ENSDORG00000013555	Chd1l	97	61.705	Dipodomys_ordii
ENSFHEG00000012420	chd1l	79	60.915	ENSETEG00000008445	CHD1L	88	60.739	Echinops_telfairi
ENSFHEG00000012420	chd1l	69	50.439	ENSEBUG00000005791	chd1l	86	52.239	Eptatretus_burgeri
ENSFHEG00000012420	chd1l	87	62.586	ENSEASG00005007364	CHD1L	100	63.273	Equus_asinus_asinus
ENSFHEG00000012420	chd1l	87	62.586	ENSECAG00000008915	CHD1L	100	63.273	Equus_caballus
ENSFHEG00000012420	chd1l	100	59.707	ENSELUG00000016844	chd1l	99	59.922	Esox_lucius
ENSFHEG00000012420	chd1l	84	64.075	ENSFCAG00000007777	CHD1L	97	62.301	Felis_catus
ENSFHEG00000012420	chd1l	86	61.785	ENSFALG00000006087	CHD1L	99	61.547	Ficedula_albicollis
ENSFHEG00000012420	chd1l	83	64.286	ENSFDAG00000012431	CHD1L	99	63.423	Fukomys_damarensis
ENSFHEG00000012420	chd1l	85	62.747	ENSGALG00000015038	CHD1L	96	62.153	Gallus_gallus
ENSFHEG00000012420	chd1l	100	86.436	ENSGAFG00000018198	chd1l	99	86.832	Gambusia_affinis
ENSFHEG00000012420	chd1l	51	83.170	ENSGACG00000014042	chd1l	97	83.432	Gasterosteus_aculeatus
ENSFHEG00000012420	chd1l	84	65.489	ENSGAGG00000014432	CHD1L	96	64.664	Gopherus_agassizii
ENSFHEG00000012420	chd1l	85	63.573	ENSGGOG00000001067	CHD1L	97	62.344	Gorilla_gorilla
ENSFHEG00000012420	chd1l	94	81.474	ENSHBUG00000007464	chd1l	98	81.515	Haplochromis_burtoni
ENSFHEG00000012420	chd1l	85	62.485	ENSHGLG00000008933	CHD1L	96	61.993	Heterocephalus_glaber_female
ENSFHEG00000012420	chd1l	83	61.684	ENSHGLG00100007155	CHD1L	99	60.702	Heterocephalus_glaber_male
ENSFHEG00000012420	chd1l	83	76.162	ENSHCOG00000012787	chd1l	92	76.520	Hippocampus_comes
ENSFHEG00000012420	chd1l	100	64.286	ENSIPUG00000022617	chd1l	99	64.712	Ictalurus_punctatus
ENSFHEG00000012420	chd1l	87	57.323	ENSSTOG00000007032	CHD1L	97	57.323	Ictidomys_tridecemlineatus
ENSFHEG00000012420	chd1l	100	80.517	ENSKMAG00000014358	chd1l	99	80.417	Kryptolebias_marmoratus
ENSFHEG00000012420	chd1l	100	78.389	ENSLBEG00000023845	chd1l	99	78.585	Labrus_bergylta
ENSFHEG00000012420	chd1l	98	57.884	ENSLACG00000006262	CHD1L	97	58.000	Latimeria_chalumnae
ENSFHEG00000012420	chd1l	100	68.056	ENSLOCG00000010574	chd1l	99	67.956	Lepisosteus_oculatus
ENSFHEG00000012420	chd1l	85	63.899	ENSLAFG00000018136	CHD1L	100	63.995	Loxodonta_africana
ENSFHEG00000012420	chd1l	84	64.057	ENSMFAG00000043562	CHD1L	99	63.714	Macaca_fascicularis
ENSFHEG00000012420	chd1l	85	64.186	ENSMMUG00000009024	CHD1L	97	63.116	Macaca_mulatta
ENSFHEG00000012420	chd1l	85	64.186	ENSMNEG00000039905	CHD1L	97	63.116	Macaca_nemestrina
ENSFHEG00000012420	chd1l	85	64.186	ENSMLEG00000030900	CHD1L	97	63.116	Mandrillus_leucophaeus
ENSFHEG00000012420	chd1l	100	79.150	ENSMAMG00000012822	chd1l	99	80.069	Mastacembelus_armatus
ENSFHEG00000012420	chd1l	94	81.579	ENSMZEG00005020830	chd1l	95	81.474	Maylandia_zebra
ENSFHEG00000012420	chd1l	85	62.807	ENSMGAG00000014304	CHD1L	99	62.456	Meleagris_gallopavo
ENSFHEG00000012420	chd1l	85	64.302	ENSMICG00000002497	CHD1L	97	63.440	Microcebus_murinus
ENSFHEG00000012420	chd1l	86	63.390	ENSMOCG00000006305	Chd1l	98	62.825	Microtus_ochrogaster
ENSFHEG00000012420	chd1l	91	70.985	ENSMMOG00000005964	chd1l	97	70.771	Mola_mola
ENSFHEG00000012420	chd1l	88	62.668	ENSMODG00000018717	CHD1L	99	62.444	Monodelphis_domestica
ENSFHEG00000012420	chd1l	100	80.318	ENSMALG00000014675	chd1l	99	80.517	Monopterus_albus
ENSFHEG00000012420	chd1l	87	63.886	MGP_CAROLIEiJ_G0025401	Chd1l	98	63.886	Mus_caroli
ENSFHEG00000012420	chd1l	85	64.360	ENSMUSG00000028089	Chd1l	98	62.896	Mus_musculus
ENSFHEG00000012420	chd1l	87	63.699	MGP_PahariEiJ_G0026845	Chd1l	98	63.470	Mus_pahari
ENSFHEG00000012420	chd1l	85	64.377	MGP_SPRETEiJ_G0026347	Chd1l	98	63.356	Mus_spretus
ENSFHEG00000012420	chd1l	87	63.657	ENSMPUG00000000615	CHD1L	97	63.272	Mustela_putorius_furo
ENSFHEG00000012420	chd1l	85	63.194	ENSMLUG00000007573	CHD1L	97	62.120	Myotis_lucifugus
ENSFHEG00000012420	chd1l	85	60.624	ENSNGAG00000000908	Chd1l	98	60.393	Nannospalax_galili
ENSFHEG00000012420	chd1l	86	78.645	ENSNBRG00000006021	chd1l	95	78.875	Neolamprologus_brichardi
ENSFHEG00000012420	chd1l	85	63.626	ENSNLEG00000000179	CHD1L	97	62.372	Nomascus_leucogenys
ENSFHEG00000012420	chd1l	83	55.238	ENSOPRG00000006973	CHD1L	89	64.764	Ochotona_princeps
ENSFHEG00000012420	chd1l	85	59.724	ENSODEG00000002494	CHD1L	97	59.226	Octodon_degus
ENSFHEG00000012420	chd1l	100	81.009	ENSONIG00000003183	chd1l	99	81.009	Oreochromis_niloticus
ENSFHEG00000012420	chd1l	76	60.000	ENSOANG00000003068	CHD1L	93	60.825	Ornithorhynchus_anatinus
ENSFHEG00000012420	chd1l	85	60.596	ENSOCUG00000009336	CHD1L	97	59.820	Oryctolagus_cuniculus
ENSFHEG00000012420	chd1l	90	75.889	ENSORLG00000003673	chd1l	99	75.778	Oryzias_latipes
ENSFHEG00000012420	chd1l	94	76.705	ENSORLG00020005123	chd1l	99	76.600	Oryzias_latipes_hni
ENSFHEG00000012420	chd1l	94	76.866	ENSORLG00015001680	chd1l	99	77.107	Oryzias_latipes_hsok
ENSFHEG00000012420	chd1l	80	75.325	ENSOMEG00000006109	chd1l	95	75.325	Oryzias_melastigma
ENSFHEG00000012420	chd1l	85	63.361	ENSOGAG00000008775	CHD1L	95	63.244	Otolemur_garnettii
ENSFHEG00000012420	chd1l	86	63.679	ENSOARG00000020547	CHD1L	99	63.807	Ovis_aries
ENSFHEG00000012420	chd1l	85	63.435	ENSPPAG00000039193	CHD1L	99	63.515	Pan_paniscus
ENSFHEG00000012420	chd1l	85	64.286	ENSPPRG00000010258	CHD1L	97	62.756	Panthera_pardus
ENSFHEG00000012420	chd1l	85	64.037	ENSPTRG00000001220	CHD1L	97	63.031	Pan_troglodytes
ENSFHEG00000012420	chd1l	84	64.900	ENSPANG00000009170	CHD1L	97	63.116	Papio_anubis
ENSFHEG00000012420	chd1l	100	68.911	ENSPKIG00000022166	chd1l	99	68.812	Paramormyrops_kingsleyae
ENSFHEG00000012420	chd1l	85	64.713	ENSPSIG00000012595	CHD1L	96	63.417	Pelodiscus_sinensis
ENSFHEG00000012420	chd1l	86	62.386	ENSPEMG00000013528	Chd1l	99	61.179	Peromyscus_maniculatus_bairdii
ENSFHEG00000012420	chd1l	82	63.471	ENSPCIG00000030409	CHD1L	99	63.350	Phascolarctos_cinereus
ENSFHEG00000012420	chd1l	100	86.409	ENSPFOG00000015948	chd1l	99	86.607	Poecilia_formosa
ENSFHEG00000012420	chd1l	100	87.043	ENSPLAG00000015145	chd1l	99	87.240	Poecilia_latipinna
ENSFHEG00000012420	chd1l	94	86.947	ENSPMEG00000008720	chd1l	99	87.368	Poecilia_mexicana
ENSFHEG00000012420	chd1l	86	85.402	ENSPREG00000017885	chd1l	98	85.517	Poecilia_reticulata
ENSFHEG00000012420	chd1l	85	63.912	ENSPPYG00000000946	CHD1L	97	62.772	Pongo_abelii
ENSFHEG00000012420	chd1l	81	57.811	ENSPCAG00000005959	CHD1L	90	57.423	Procavia_capensis
ENSFHEG00000012420	chd1l	84	60.306	ENSPVAG00000006084	CHD1L	99	60.188	Pteropus_vampyrus
ENSFHEG00000012420	chd1l	86	81.745	ENSPNYG00000013001	chd1l	97	81.630	Pundamilia_nyererei
ENSFHEG00000012420	chd1l	100	67.122	ENSPNAG00000011881	chd1l	99	66.993	Pygocentrus_nattereri
ENSFHEG00000012420	chd1l	87	63.842	ENSRNOG00000017669	Chd1l	98	63.616	Rattus_norvegicus
ENSFHEG00000012420	chd1l	85	63.256	ENSRBIG00000041272	CHD1L	97	62.199	Rhinopithecus_bieti
ENSFHEG00000012420	chd1l	85	63.275	ENSRROG00000041354	CHD1L	96	62.998	Rhinopithecus_roxellana
ENSFHEG00000012420	chd1l	86	62.572	ENSSHAG00000017395	CHD1L	99	61.392	Sarcophilus_harrisii
ENSFHEG00000012420	chd1l	94	68.980	ENSSFOG00015003649	chd1l	98	70.208	Scleropages_formosus
ENSFHEG00000012420	chd1l	100	75.980	ENSSMAG00000019377	chd1l	99	76.176	Scophthalmus_maximus
ENSFHEG00000012420	chd1l	87	80.664	ENSSDUG00000019831	chd1l	98	80.549	Seriola_dumerili
ENSFHEG00000012420	chd1l	84	82.645	ENSSLDG00000012714	chd1l	95	82.409	Seriola_lalandi_dorsalis
ENSFHEG00000012420	chd1l	86	61.998	ENSSPUG00000016865	CHD1L	98	61.600	Sphenodon_punctatus
ENSFHEG00000012420	chd1l	94	82.650	ENSSPAG00000017653	chd1l	99	82.755	Stegastes_partitus
ENSFHEG00000012420	chd1l	85	62.121	ENSSSCG00000006701	CHD1L	98	61.213	Sus_scrofa
ENSFHEG00000012420	chd1l	85	63.423	ENSTGUG00000013392	-	99	62.976	Taeniopygia_guttata
ENSFHEG00000012420	chd1l	84	68.433	ENSTNIG00000004902	chd1l	99	68.433	Tetraodon_nigroviridis
ENSFHEG00000012420	chd1l	85	61.189	ENSTTRG00000011711	CHD1L	99	60.864	Tursiops_truncatus
ENSFHEG00000012420	chd1l	87	63.688	ENSUAMG00000021991	CHD1L	98	62.727	Ursus_americanus
ENSFHEG00000012420	chd1l	87	63.170	ENSUMAG00000009733	CHD1L	97	63.303	Ursus_maritimus
ENSFHEG00000012420	chd1l	87	62.857	ENSVVUG00000007316	CHD1L	92	63.869	Vulpes_vulpes
ENSFHEG00000012420	chd1l	98	82.644	ENSXCOG00000008336	chd1l	98	82.846	Xiphophorus_couchianus
ENSFHEG00000012420	chd1l	100	87.190	ENSXMAG00000015898	chd1l	99	87.388	Xiphophorus_maculatus