EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012496 (Gene tree)
Gene ID: 105919370
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 7957 bases
Position: chrKN805948.1:250912-258868
Accession: 105919370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000011113	Nucleoplasmin	PF03066.15	1.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000018016	-	2557	XM_012854678	ENSFHEP00000011113	300 (aa)	XP_012710132	UPI0006450E5E

Gene Model

Click here to download ENSFHEG00000012496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012496	npm1a	97	42.997	ENSFHEG00000020794	npm1b	96	41.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012496	npm1a	100	72.222	ENSAPOG00000002813	npm1a	100	74.183	Acanthochromis_polyacanthus
ENSFHEG00000012496	npm1a	94	74.823	ENSACIG00000014201	npm1a	100	75.177	Amphilophus_citrinellus
ENSFHEG00000012496	npm1a	89	67.041	ENSAOCG00000004978	npm1a	100	65.169	Amphiprion_ocellaris
ENSFHEG00000012496	npm1a	100	75.410	ENSAPEG00000008594	npm1a	100	75.410	Amphiprion_percula
ENSFHEG00000012496	npm1a	100	73.482	ENSATEG00000008885	npm1a	99	74.434	Anabas_testudineus
ENSFHEG00000012496	npm1a	97	66.781	ENSACLG00000008376	npm1a	96	66.438	Astatotilapia_calliptera
ENSFHEG00000012496	npm1a	98	55.290	ENSAMXG00000010155	npm1a	98	56.849	Astyanax_mexicanus
ENSFHEG00000012496	npm1a	100	57.333	ENSCSEG00000011165	npm1a	96	76.774	Cynoglossus_semilaevis
ENSFHEG00000012496	npm1a	100	74.419	ENSCVAG00000008960	npm1a	100	74.751	Cyprinodon_variegatus
ENSFHEG00000012496	npm1a	97	65.068	ENSDARG00000014329	npm1a	93	73.377	Danio_rerio
ENSFHEG00000012496	npm1a	95	34.365	ENSEBUG00000012753	npm1a	91	34.985	Eptatretus_burgeri
ENSFHEG00000012496	npm1a	100	66.557	ENSELUG00000013705	npm1a	100	66.885	Esox_lucius
ENSFHEG00000012496	npm1a	100	71.617	ENSGAFG00000013059	npm1a	100	71.947	Gambusia_affinis
ENSFHEG00000012496	npm1a	99	62.752	ENSGACG00000020319	npm1a	99	62.416	Gasterosteus_aculeatus
ENSFHEG00000012496	npm1a	99	70.126	ENSHBUG00000000776	npm1a	100	70.126	Haplochromis_burtoni
ENSFHEG00000012496	npm1a	100	54.221	ENSHCOG00000001059	npm1a	99	53.922	Hippocampus_comes
ENSFHEG00000012496	npm1a	98	60.855	ENSIPUG00000019452	npm1	99	61.842	Ictalurus_punctatus
ENSFHEG00000012496	npm1a	100	74.667	ENSKMAG00000010709	npm1a	100	74.000	Kryptolebias_marmoratus
ENSFHEG00000012496	npm1a	100	67.541	ENSLBEG00000008793	npm1a	100	67.869	Labrus_bergylta
ENSFHEG00000012496	npm1a	85	56.204	ENSLOCG00000009683	npm1a	100	56.777	Lepisosteus_oculatus
ENSFHEG00000012496	npm1a	100	71.382	ENSMAMG00000009344	npm1a	83	71.053	Mastacembelus_armatus
ENSFHEG00000012496	npm1a	99	69.716	ENSMZEG00005013717	npm1a	100	69.716	Maylandia_zebra
ENSFHEG00000012496	npm1a	95	71.429	ENSMMOG00000007980	npm1a	100	71.429	Mola_mola
ENSFHEG00000012496	npm1a	100	71.569	ENSMALG00000001146	npm1a	100	74.183	Monopterus_albus
ENSFHEG00000012496	npm1a	99	66.458	ENSNBRG00000013172	npm1a	100	66.771	Neolamprologus_brichardi
ENSFHEG00000012496	npm1a	99	69.103	ENSONIG00000001860	npm1a	98	70.297	Oreochromis_niloticus
ENSFHEG00000012496	npm1a	100	73.841	ENSORLG00000010179	npm1a	100	73.510	Oryzias_latipes
ENSFHEG00000012496	npm1a	100	72.848	ENSORLG00020020817	npm1a	100	72.185	Oryzias_latipes_hni
ENSFHEG00000012496	npm1a	100	74.172	ENSORLG00015003439	npm1a	100	73.841	Oryzias_latipes_hsok
ENSFHEG00000012496	npm1a	100	73.510	ENSOMEG00000007083	npm1a	100	73.841	Oryzias_melastigma
ENSFHEG00000012496	npm1a	100	56.393	ENSPKIG00000023943	npm1a	100	56.066	Paramormyrops_kingsleyae
ENSFHEG00000012496	npm1a	100	55.150	ENSPMGG00000011716	npm1a	100	51.827	Periophthalmus_magnuspinnatus
ENSFHEG00000012496	npm1a	100	73.090	ENSPFOG00000019173	npm1a	100	73.422	Poecilia_formosa
ENSFHEG00000012496	npm1a	100	72.517	ENSPLAG00000001093	npm1a	100	72.517	Poecilia_latipinna
ENSFHEG00000012496	npm1a	100	73.090	ENSPMEG00000012523	npm1a	100	73.422	Poecilia_mexicana
ENSFHEG00000012496	npm1a	100	72.848	ENSPREG00000001647	npm1a	100	73.179	Poecilia_reticulata
ENSFHEG00000012496	npm1a	99	71.885	ENSPNYG00000019321	npm1a	100	72.204	Pundamilia_nyererei
ENSFHEG00000012496	npm1a	98	62.252	ENSPNAG00000026891	npm1a	98	62.791	Pygocentrus_nattereri
ENSFHEG00000012496	npm1a	100	59.804	ENSSFOG00015007074	npm1a	100	58.497	Scleropages_formosus
ENSFHEG00000012496	npm1a	100	71.803	ENSSMAG00000019090	npm1a	100	71.148	Scophthalmus_maximus
ENSFHEG00000012496	npm1a	100	74.013	ENSSDUG00000015609	npm1a	100	74.342	Seriola_dumerili
ENSFHEG00000012496	npm1a	100	74.257	ENSSLDG00000017849	npm1a	100	75.248	Seriola_lalandi_dorsalis
ENSFHEG00000012496	npm1a	100	64.238	ENSSPAG00000021660	npm1a	100	64.238	Stegastes_partitus
ENSFHEG00000012496	npm1a	100	72.078	ENSTRUG00000024003	npm1a	100	71.947	Takifugu_rubripes
ENSFHEG00000012496	npm1a	100	69.536	ENSTNIG00000010773	npm1a	100	69.868	Tetraodon_nigroviridis
ENSFHEG00000012496	npm1a	99	66.107	ENSXCOG00000005958	npm1a	100	71.479	Xiphophorus_couchianus
ENSFHEG00000012496	npm1a	100	74.917	ENSXMAG00000000396	npm1a	100	74.917	Xiphophorus_maculatus