EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000012579 (Gene tree)
Gene ID: 105938456
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 9829 bases
Position: chrKN811545.1:583804-593632
Accession: 105938456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	1	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	2	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	3	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	4	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	5	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	6	7
ENSFHEP00000011169	zf-C2H2	PF00096.26	6.5e-37	7	7
ENSFHEP00000011169	zf-met	PF12874.7	1.1e-23	1	5
ENSFHEP00000011169	zf-met	PF12874.7	1.1e-23	2	5
ENSFHEP00000011169	zf-met	PF12874.7	1.1e-23	3	5
ENSFHEP00000011169	zf-met	PF12874.7	1.1e-23	4	5
ENSFHEP00000011169	zf-met	PF12874.7	1.1e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000018078	-	3924	XM_012880202	ENSFHEP00000011169	1307 (aa)	XP_012735656	UPI0006450348

Gene Model

Click here to download ENSFHEG00000012579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000012579	sall1a	99	60.000	ENSFHEG00000014187	sall4	95	60.000
ENSFHEG00000012579	sall1a	74	63.415	ENSFHEG00000008424	-	100	64.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012579	sall1a	99	67.115	ENSG00000103449	SALL1	100	67.535	Homo_sapiens
ENSFHEG00000012579	sall1a	100	92.349	ENSAPOG00000022764	sall1a	100	92.349	Acanthochromis_polyacanthus
ENSFHEG00000012579	sall1a	99	66.292	ENSAMEG00000006817	SALL1	100	66.592	Ailuropoda_melanoleuca
ENSFHEG00000012579	sall1a	100	90.819	ENSACIG00000004231	sall1a	100	90.819	Amphilophus_citrinellus
ENSFHEG00000012579	sall1a	100	92.578	ENSAOCG00000002800	sall1a	100	92.578	Amphiprion_ocellaris
ENSFHEG00000012579	sall1a	100	92.349	ENSAPEG00000010179	sall1a	100	92.349	Amphiprion_percula
ENSFHEG00000012579	sall1a	99	90.735	ENSATEG00000003006	sall1a	99	90.909	Anabas_testudineus
ENSFHEG00000012579	sall1a	100	68.595	ENSAPLG00000003356	SALL1	100	68.971	Anas_platyrhynchos
ENSFHEG00000012579	sall1a	99	67.120	ENSACAG00000014399	SALL1	97	67.020	Anolis_carolinensis
ENSFHEG00000012579	sall1a	99	67.290	ENSANAG00000027238	SALL1	100	67.684	Aotus_nancymaae
ENSFHEG00000012579	sall1a	100	91.125	ENSACLG00000017148	sall1a	100	91.125	Astatotilapia_calliptera
ENSFHEG00000012579	sall1a	99	51.811	ENSAMXG00000017702	sall1b	99	52.325	Astyanax_mexicanus
ENSFHEG00000012579	sall1a	100	79.604	ENSAMXG00000018599	sall1a	100	80.061	Astyanax_mexicanus
ENSFHEG00000012579	sall1a	100	66.692	ENSBTAG00000008544	SALL1	100	67.066	Bos_taurus
ENSFHEG00000012579	sall1a	99	67.614	ENSCJAG00000001740	SALL1	99	68.087	Callithrix_jacchus
ENSFHEG00000012579	sall1a	99	66.442	ENSCAFG00000009755	SALL1	100	66.966	Canis_familiaris
ENSFHEG00000012579	sall1a	99	66.442	ENSCAFG00020002842	SALL1	100	66.966	Canis_lupus_dingo
ENSFHEG00000012579	sall1a	100	66.517	ENSCHIG00000026074	SALL1	100	67.016	Capra_hircus
ENSFHEG00000012579	sall1a	99	68.036	ENSTSYG00000029464	SALL1	100	68.036	Carlito_syrichta
ENSFHEG00000012579	sall1a	97	67.972	ENSCPOG00000006564	SALL1	99	67.948	Cavia_porcellus
ENSFHEG00000012579	sall1a	99	65.644	ENSCCAG00000001639	SALL1	100	65.919	Cebus_capucinus
ENSFHEG00000012579	sall1a	99	67.515	ENSCATG00000004982	SALL1	100	67.913	Cercocebus_atys
ENSFHEG00000012579	sall1a	99	67.141	ENSCLAG00000006380	SALL1	100	67.464	Chinchilla_lanigera
ENSFHEG00000012579	sall1a	99	66.617	ENSCSAG00000005319	SALL1	100	66.940	Chlorocebus_sabaeus
ENSFHEG00000012579	sall1a	66	66.016	ENSCHOG00000000800	-	69	66.275	Choloepus_hoffmanni
ENSFHEG00000012579	sall1a	100	68.820	ENSCPBG00000015924	SALL1	100	69.368	Chrysemys_picta_bellii
ENSFHEG00000012579	sall1a	99	67.742	ENSCANG00000036664	SALL1	100	68.042	Colobus_angolensis_palliatus
ENSFHEG00000012579	sall1a	99	66.218	ENSCGRG00001023314	-	100	66.517	Cricetulus_griseus_chok1gshd
ENSFHEG00000012579	sall1a	97	66.385	ENSCGRG00000009496	Sall1	99	66.692	Cricetulus_griseus_crigri
ENSFHEG00000012579	sall1a	99	87.939	ENSCSEG00000009349	sall1a	99	87.939	Cynoglossus_semilaevis
ENSFHEG00000012579	sall1a	90	95.271	ENSCVAG00000020513	sall1a	99	95.271	Cyprinodon_variegatus
ENSFHEG00000012579	sall1a	99	47.846	ENSDARG00000075891	sall1b	99	46.882	Danio_rerio
ENSFHEG00000012579	sall1a	100	78.951	ENSDARG00000074319	sall1a	100	78.689	Danio_rerio
ENSFHEG00000012579	sall1a	99	67.691	ENSDNOG00000016413	SALL1	100	67.841	Dasypus_novemcinctus
ENSFHEG00000012579	sall1a	97	67.411	ENSETEG00000015150	SALL1	99	67.568	Echinops_telfairi
ENSFHEG00000012579	sall1a	59	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSFHEG00000012579	sall1a	62	42.755	ENSEBUG00000008798	SALL1	94	35.615	Eptatretus_burgeri
ENSFHEG00000012579	sall1a	99	66.991	ENSEASG00005014602	SALL1	100	67.341	Equus_asinus_asinus
ENSFHEG00000012579	sall1a	91	65.045	ENSECAG00000011334	SALL1	99	65.483	Equus_caballus
ENSFHEG00000012579	sall1a	97	67.767	ENSEEUG00000002014	SALL1	99	67.640	Erinaceus_europaeus
ENSFHEG00000012579	sall1a	100	53.858	ENSELUG00000017774	-	100	54.471	Esox_lucius
ENSFHEG00000012579	sall1a	100	76.973	ENSELUG00000006159	sall1a	100	77.044	Esox_lucius
ENSFHEG00000012579	sall1a	99	65.793	ENSFCAG00000024654	SALL1	100	66.613	Felis_catus
ENSFHEG00000012579	sall1a	100	68.971	ENSFALG00000000074	SALL1	100	69.098	Ficedula_albicollis
ENSFHEG00000012579	sall1a	100	83.384	ENSGMOG00000006103	sall1a	100	83.384	Gadus_morhua
ENSFHEG00000012579	sall1a	97	40.549	ENSGMOG00000013383	-	99	40.760	Gadus_morhua
ENSFHEG00000012579	sall1a	100	69.069	ENSGALG00000039238	SALL1	100	69.121	Gallus_gallus
ENSFHEG00000012579	sall1a	100	95.798	ENSGAFG00000009964	sall1a	100	95.798	Gambusia_affinis
ENSFHEG00000012579	sall1a	99	88.897	ENSGACG00000016702	sall1a	99	88.897	Gasterosteus_aculeatus
ENSFHEG00000012579	sall1a	100	68.694	ENSGAGG00000013979	SALL1	100	69.206	Gopherus_agassizii
ENSFHEG00000012579	sall1a	99	67.341	ENSGGOG00000000663	SALL1	100	67.687	Gorilla_gorilla
ENSFHEG00000012579	sall1a	100	91.048	ENSHBUG00000022005	sall1a	100	91.048	Haplochromis_burtoni
ENSFHEG00000012579	sall1a	99	67.740	ENSHGLG00000004288	-	100	68.138	Heterocephalus_glaber_female
ENSFHEG00000012579	sall1a	99	67.740	ENSHGLG00100017496	SALL1	100	68.138	Heterocephalus_glaber_male
ENSFHEG00000012579	sall1a	100	84.290	ENSHCOG00000000974	sall1a	100	84.139	Hippocampus_comes
ENSFHEG00000012579	sall1a	99	50.076	ENSIPUG00000022928	sall1b	99	49.849	Ictalurus_punctatus
ENSFHEG00000012579	sall1a	100	79.300	ENSIPUG00000016265	SALL1	100	78.599	Ictalurus_punctatus
ENSFHEG00000012579	sall1a	99	67.211	ENSSTOG00000020885	SALL1	100	67.708	Ictidomys_tridecemlineatus
ENSFHEG00000012579	sall1a	100	92.272	ENSKMAG00000016681	sall1a	100	92.272	Kryptolebias_marmoratus
ENSFHEG00000012579	sall1a	98	88.410	ENSLBEG00000012207	sall1a	95	88.410	Labrus_bergylta
ENSFHEG00000012579	sall1a	92	39.300	ENSLACG00000014018	-	93	39.429	Latimeria_chalumnae
ENSFHEG00000012579	sall1a	100	68.021	ENSLACG00000003556	SALL1	100	68.322	Latimeria_chalumnae
ENSFHEG00000012579	sall1a	100	100.000	ENSLOCG00000007283	sall1b	94	100.000	Lepisosteus_oculatus
ENSFHEG00000012579	sall1a	98	67.330	ENSLAFG00000015251	SALL1	100	67.559	Loxodonta_africana
ENSFHEG00000012579	sall1a	99	67.464	ENSMFAG00000003298	SALL1	100	67.764	Macaca_fascicularis
ENSFHEG00000012579	sall1a	93	67.500	ENSMMUG00000017200	SALL1	100	67.661	Macaca_mulatta
ENSFHEG00000012579	sall1a	93	67.687	ENSMNEG00000034770	SALL1	100	67.607	Macaca_nemestrina
ENSFHEG00000012579	sall1a	99	67.665	ENSMLEG00000036406	SALL1	100	67.889	Mandrillus_leucophaeus
ENSFHEG00000012579	sall1a	99	91.584	ENSMAMG00000004164	sall1a	99	91.584	Mastacembelus_armatus
ENSFHEG00000012579	sall1a	100	91.125	ENSMZEG00005006479	sall1a	100	91.125	Maylandia_zebra
ENSFHEG00000012579	sall1a	98	68.760	ENSMGAG00000004704	SALL1	100	68.812	Meleagris_gallopavo
ENSFHEG00000012579	sall1a	99	65.744	ENSMAUG00000019093	Sall1	100	65.919	Mesocricetus_auratus
ENSFHEG00000012579	sall1a	100	67.067	ENSMICG00000036486	SALL1	100	67.292	Microcebus_murinus
ENSFHEG00000012579	sall1a	99	89.969	ENSMMOG00000016400	sall1a	99	89.969	Mola_mola
ENSFHEG00000012579	sall1a	99	68.492	ENSMODG00000013114	SALL1	99	68.647	Monodelphis_domestica
ENSFHEG00000012579	sall1a	99	90.658	ENSMALG00000013400	sall1a	99	90.658	Monopterus_albus
ENSFHEG00000012579	sall1a	99	66.196	MGP_CAROLIEiJ_G0031362	Sall1	100	66.469	Mus_caroli
ENSFHEG00000012579	sall1a	99	65.924	ENSMUSG00000031665	Sall1	100	66.518	Mus_musculus
ENSFHEG00000012579	sall1a	99	66.320	MGP_PahariEiJ_G0022961	Sall1	100	66.418	Mus_pahari
ENSFHEG00000012579	sall1a	99	65.850	MGP_SPRETEiJ_G0032480	Sall1	100	66.443	Mus_spretus
ENSFHEG00000012579	sall1a	97	66.538	ENSMPUG00000003265	SALL1	95	66.846	Mustela_putorius_furo
ENSFHEG00000012579	sall1a	97	65.161	ENSMLUG00000015541	SALL1	99	66.031	Myotis_lucifugus
ENSFHEG00000012579	sall1a	100	91.431	ENSNBRG00000009307	sall1a	100	91.431	Neolamprologus_brichardi
ENSFHEG00000012579	sall1a	93	81.564	ENSNLEG00000001008	SALL1	99	81.111	Nomascus_leucogenys
ENSFHEG00000012579	sall1a	99	68.595	ENSMEUG00000012206	SALL1	99	68.797	Notamacropus_eugenii
ENSFHEG00000012579	sall1a	86	70.922	ENSOPRG00000005645	SALL1	73	70.555	Ochotona_princeps
ENSFHEG00000012579	sall1a	99	67.240	ENSODEG00000003685	SALL1	100	67.614	Octodon_degus
ENSFHEG00000012579	sall1a	100	91.660	ENSONIG00000002831	sall1a	100	91.660	Oreochromis_niloticus
ENSFHEG00000012579	sall1a	99	63.280	ENSOANG00000013399	SALL1	96	77.869	Ornithorhynchus_anatinus
ENSFHEG00000012579	sall1a	100	90.360	ENSORLG00000013827	sall1a	100	91.132	Oryzias_latipes
ENSFHEG00000012579	sall1a	100	90.436	ENSORLG00020020570	sall1a	100	90.436	Oryzias_latipes_hni
ENSFHEG00000012579	sall1a	100	90.436	ENSORLG00015018830	sall1a	100	91.301	Oryzias_latipes_hsok
ENSFHEG00000012579	sall1a	100	89.977	ENSOMEG00000016043	sall1a	100	90.339	Oryzias_melastigma
ENSFHEG00000012579	sall1a	99	67.689	ENSOGAG00000027316	SALL1	100	67.740	Otolemur_garnettii
ENSFHEG00000012579	sall1a	100	62.930	ENSOARG00000017583	SALL1	100	63.201	Ovis_aries
ENSFHEG00000012579	sall1a	99	49.774	ENSPPAG00000035136	-	99	50.075	Pan_paniscus
ENSFHEG00000012579	sall1a	97	67.613	ENSPPAG00000035657	SALL1	99	67.896	Pan_paniscus
ENSFHEG00000012579	sall1a	100	65.669	ENSPPRG00000023283	SALL1	100	66.613	Panthera_pardus
ENSFHEG00000012579	sall1a	80	71.053	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSFHEG00000012579	sall1a	99	49.962	ENSPTRG00000045256	-	99	50.418	Pan_troglodytes
ENSFHEG00000012579	sall1a	99	67.141	ENSPTRG00000008108	SALL1	100	67.610	Pan_troglodytes
ENSFHEG00000012579	sall1a	99	67.590	ENSPANG00000024176	SALL1	100	67.814	Papio_anubis
ENSFHEG00000012579	sall1a	100	70.530	ENSPKIG00000005383	-	100	70.833	Paramormyrops_kingsleyae
ENSFHEG00000012579	sall1a	100	72.184	ENSPKIG00000022251	sall1a	100	72.260	Paramormyrops_kingsleyae
ENSFHEG00000012579	sall1a	100	69.121	ENSPSIG00000008582	SALL1	100	69.323	Pelodiscus_sinensis
ENSFHEG00000012579	sall1a	99	84.063	ENSPMGG00000021788	sall1a	99	84.063	Periophthalmus_magnuspinnatus
ENSFHEG00000012579	sall1a	97	47.985	ENSPMAG00000008148	sall1b	97	48.586	Petromyzon_marinus
ENSFHEG00000012579	sall1a	99	68.642	ENSPCIG00000017840	SALL1	99	68.797	Phascolarctos_cinereus
ENSFHEG00000012579	sall1a	98	96.037	ENSPFOG00000015799	sall1a	96	96.037	Poecilia_formosa
ENSFHEG00000012579	sall1a	100	96.257	ENSPLAG00000022539	sall1a	100	96.257	Poecilia_latipinna
ENSFHEG00000012579	sall1a	100	96.486	ENSPMEG00000020894	sall1a	100	96.486	Poecilia_mexicana
ENSFHEG00000012579	sall1a	100	95.951	ENSPREG00000006802	sall1a	100	95.951	Poecilia_reticulata
ENSFHEG00000012579	sall1a	90	65.856	ENSPPYG00000007345	SALL1	96	66.444	Pongo_abelii
ENSFHEG00000012579	sall1a	84	69.133	ENSPCAG00000008162	SALL1	93	69.201	Procavia_capensis
ENSFHEG00000012579	sall1a	99	66.816	ENSPCOG00000028192	SALL1	100	67.140	Propithecus_coquereli
ENSFHEG00000012579	sall1a	67	69.329	ENSPVAG00000015374	SALL1	100	69.177	Pteropus_vampyrus
ENSFHEG00000012579	sall1a	100	91.201	ENSPNYG00000010865	sall1a	100	91.201	Pundamilia_nyererei
ENSFHEG00000012579	sall1a	99	53.293	ENSPNAG00000007442	sall1b	99	53.443	Pygocentrus_nattereri
ENSFHEG00000012579	sall1a	69	65.306	ENSPNAG00000028248	-	97	65.306	Pygocentrus_nattereri
ENSFHEG00000012579	sall1a	100	78.023	ENSPNAG00000023644	sall1a	100	78.479	Pygocentrus_nattereri
ENSFHEG00000012579	sall1a	100	66.817	ENSRNOG00000013907	Sall1	100	66.892	Rattus_norvegicus
ENSFHEG00000012579	sall1a	93	67.312	ENSRBIG00000015707	SALL1	100	67.820	Rhinopithecus_bieti
ENSFHEG00000012579	sall1a	97	67.563	ENSRROG00000035777	SALL1	100	67.981	Rhinopithecus_roxellana
ENSFHEG00000012579	sall1a	99	67.464	ENSSBOG00000032186	SALL1	100	67.684	Saimiri_boliviensis_boliviensis
ENSFHEG00000012579	sall1a	99	67.919	ENSSHAG00000009477	SALL1	99	68.045	Sarcophilus_harrisii
ENSFHEG00000012579	sall1a	100	72.549	ENSSFOG00015020020	sall1a	100	72.474	Scleropages_formosus
ENSFHEG00000012579	sall1a	98	70.805	ENSSFOG00015001590	sall1a	99	71.318	Scleropages_formosus
ENSFHEG00000012579	sall1a	99	91.041	ENSSMAG00000009160	sall1a	99	91.041	Scophthalmus_maximus
ENSFHEG00000012579	sall1a	99	92.573	ENSSDUG00000006507	sall1a	99	92.727	Seriola_dumerili
ENSFHEG00000012579	sall1a	90	55.556	ENSSDUG00000000748	sall1b	99	55.556	Seriola_dumerili
ENSFHEG00000012579	sall1a	99	92.573	ENSSLDG00000017721	sall1a	99	92.573	Seriola_lalandi_dorsalis
ENSFHEG00000012579	sall1a	97	66.514	ENSSARG00000000661	SALL1	99	66.896	Sorex_araneus
ENSFHEG00000012579	sall1a	100	68.370	ENSSPUG00000000156	SALL1	100	68.769	Sphenodon_punctatus
ENSFHEG00000012579	sall1a	100	93.119	ENSSPAG00000021615	sall1a	100	93.119	Stegastes_partitus
ENSFHEG00000012579	sall1a	99	66.492	ENSSSCG00000002836	SALL1	100	66.567	Sus_scrofa
ENSFHEG00000012579	sall1a	100	68.745	ENSTGUG00000007514	SALL1	100	68.722	Taeniopygia_guttata
ENSFHEG00000012579	sall1a	91	86.192	ENSTRUG00000008950	sall1a	100	86.192	Takifugu_rubripes
ENSFHEG00000012579	sall1a	92	84.833	ENSTNIG00000004257	sall1a	100	84.833	Tetraodon_nigroviridis
ENSFHEG00000012579	sall1a	62	76.027	ENSTBEG00000002119	-	53	76.027	Tupaia_belangeri
ENSFHEG00000012579	sall1a	90	65.714	ENSUAMG00000023379	-	92	65.774	Ursus_americanus
ENSFHEG00000012579	sall1a	90	65.327	ENSVVUG00000019383	-	99	65.635	Vulpes_vulpes
ENSFHEG00000012579	sall1a	100	64.719	ENSXETG00000018417	sall1	100	64.792	Xenopus_tropicalis
ENSFHEG00000012579	sall1a	86	61.538	ENSXETG00000017176	sall2	84	61.538	Xenopus_tropicalis
ENSFHEG00000012579	sall1a	100	96.028	ENSXMAG00000016273	sall1a	100	96.043	Xiphophorus_maculatus