EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000012778 (Gene tree)
Gene ID: 105930556
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 24051 bases
Position: chrKN805586.1:674355-698405
Accession: 105930556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028562	ResIII	PF04851.15	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000031557	-	4605	XM_012868838	ENSFHEP00000028562	1077 (aa)	XP_012724292	A0A146Z2W6

Gene Model

Click here to download ENSFHEG00000012778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012778	smarcad1a	100	62.483	ENSG00000163104	SMARCAD1	99	67.508	Homo_sapiens
ENSFHEG00000012778	smarcad1a	100	71.963	ENSAPOG00000011446	smarcad1a	100	71.546	Acanthochromis_polyacanthus
ENSFHEG00000012778	smarcad1a	87	62.396	ENSAMEG00000005844	SMARCAD1	94	65.321	Ailuropoda_melanoleuca
ENSFHEG00000012778	smarcad1a	66	83.208	ENSACIG00000018326	smarcad1a	97	83.537	Amphilophus_citrinellus
ENSFHEG00000012778	smarcad1a	100	72.294	ENSAOCG00000019762	smarcad1a	100	71.363	Amphiprion_ocellaris
ENSFHEG00000012778	smarcad1a	100	72.187	ENSAPEG00000003889	smarcad1a	100	71.546	Amphiprion_percula
ENSFHEG00000012778	smarcad1a	95	70.921	ENSATEG00000015608	smarcad1a	99	71.060	Anabas_testudineus
ENSFHEG00000012778	smarcad1a	80	63.223	ENSAPLG00000004630	SMARCAD1	90	65.825	Anas_platyrhynchos
ENSFHEG00000012778	smarcad1a	63	63.436	ENSACAG00000013554	SMARCAD1	65	64.030	Anolis_carolinensis
ENSFHEG00000012778	smarcad1a	92	62.343	ENSANAG00000020488	SMARCAD1	94	64.978	Aotus_nancymaae
ENSFHEG00000012778	smarcad1a	65	81.598	ENSACLG00000017063	smarcad1a	100	69.613	Astatotilapia_calliptera
ENSFHEG00000012778	smarcad1a	71	69.565	ENSAMXG00000019130	smarcad1b	87	71.514	Astyanax_mexicanus
ENSFHEG00000012778	smarcad1a	66	68.303	ENSAMXG00000015470	smarcad1a	94	71.194	Astyanax_mexicanus
ENSFHEG00000012778	smarcad1a	65	62.170	ENSBTAG00000017061	SMARCAD1	65	64.978	Bos_taurus
ENSFHEG00000012778	smarcad1a	61	41.592	WBGene00010845	M03C11.8	66	41.493	Caenorhabditis_elegans
ENSFHEG00000012778	smarcad1a	87	62.483	ENSCJAG00000006778	SMARCAD1	94	65.321	Callithrix_jacchus
ENSFHEG00000012778	smarcad1a	87	62.535	ENSCAFG00000010026	SMARCAD1	94	65.471	Canis_familiaris
ENSFHEG00000012778	smarcad1a	92	62.535	ENSCAFG00020003994	SMARCAD1	90	65.471	Canis_lupus_dingo
ENSFHEG00000012778	smarcad1a	65	62.483	ENSCHIG00000012905	SMARCAD1	65	65.321	Capra_hircus
ENSFHEG00000012778	smarcad1a	100	62.343	ENSTSYG00000002706	SMARCAD1	96	65.022	Carlito_syrichta
ENSFHEG00000012778	smarcad1a	79	54.698	ENSCAPG00000016744	SMARCAD1	88	58.652	Cavia_aperea
ENSFHEG00000012778	smarcad1a	69	60.933	ENSCPOG00000011398	SMARCAD1	65	65.089	Cavia_porcellus
ENSFHEG00000012778	smarcad1a	87	62.622	ENSCCAG00000022264	SMARCAD1	99	67.677	Cebus_capucinus
ENSFHEG00000012778	smarcad1a	92	62.483	ENSCATG00000035663	SMARCAD1	90	65.321	Cercocebus_atys
ENSFHEG00000012778	smarcad1a	88	62.483	ENSCSAG00000004186	SMARCAD1	98	65.321	Chlorocebus_sabaeus
ENSFHEG00000012778	smarcad1a	67	61.885	ENSCPBG00000013203	SMARCAD1	65	65.075	Chrysemys_picta_bellii
ENSFHEG00000012778	smarcad1a	60	49.319	ENSCING00000001688	-	98	49.319	Ciona_intestinalis
ENSFHEG00000012778	smarcad1a	65	62.343	ENSCANG00000003556	SMARCAD1	99	67.508	Colobus_angolensis_palliatus
ENSFHEG00000012778	smarcad1a	86	64.118	ENSCGRG00001015056	Smarcad1	95	65.022	Cricetulus_griseus_chok1gshd
ENSFHEG00000012778	smarcad1a	86	64.118	ENSCGRG00000014087	Smarcad1	95	65.022	Cricetulus_griseus_crigri
ENSFHEG00000012778	smarcad1a	100	65.409	ENSCSEG00000017903	smarcad1a	100	64.785	Cynoglossus_semilaevis
ENSFHEG00000012778	smarcad1a	100	64.563	ENSCSEG00000014419	-	100	64.977	Cynoglossus_semilaevis
ENSFHEG00000012778	smarcad1a	91	67.615	ENSDARG00000014041	smarcad1a	92	73.404	Danio_rerio
ENSFHEG00000012778	smarcad1a	70	72.811	ENSDARG00000073721	smarcad1b	84	71.450	Danio_rerio
ENSFHEG00000012778	smarcad1a	87	62.483	ENSDNOG00000000806	-	94	65.321	Dasypus_novemcinctus
ENSFHEG00000012778	smarcad1a	67	61.330	ENSDORG00000012331	Smarcad1	66	64.793	Dipodomys_ordii
ENSFHEG00000012778	smarcad1a	59	44.954	FBgn0032157	Etl1	78	44.510	Drosophila_melanogaster
ENSFHEG00000012778	smarcad1a	61	46.637	ENSEBUG00000003969	smarcad1a	96	48.226	Eptatretus_burgeri
ENSFHEG00000012778	smarcad1a	87	62.483	ENSEASG00005012382	SMARCAD1	94	65.321	Equus_asinus_asinus
ENSFHEG00000012778	smarcad1a	87	62.483	ENSECAG00000011562	SMARCAD1	94	65.321	Equus_caballus
ENSFHEG00000012778	smarcad1a	100	60.778	ENSELUG00000018535	smarcad1a	91	76.339	Esox_lucius
ENSFHEG00000012778	smarcad1a	73	67.185	ENSELUG00000019154	smarcad1b	78	71.061	Esox_lucius
ENSFHEG00000012778	smarcad1a	87	62.674	ENSFCAG00000003958	SMARCAD1	99	67.677	Felis_catus
ENSFHEG00000012778	smarcad1a	100	63.223	ENSFALG00000006089	SMARCAD1	100	66.419	Ficedula_albicollis
ENSFHEG00000012778	smarcad1a	65	62.901	ENSFDAG00000017027	SMARCAD1	65	65.770	Fukomys_damarensis
ENSFHEG00000012778	smarcad1a	78	76.454	ENSGMOG00000018995	smarcad1a	96	76.605	Gadus_morhua
ENSFHEG00000012778	smarcad1a	76	62.804	ENSGALG00000037339	SMARCAD1	95	64.012	Gallus_gallus
ENSFHEG00000012778	smarcad1a	100	78.082	ENSGAFG00000013498	smarcad1a	100	77.310	Gambusia_affinis
ENSFHEG00000012778	smarcad1a	81	79.037	ENSGACG00000007327	smarcad1a	100	80.502	Gasterosteus_aculeatus
ENSFHEG00000012778	smarcad1a	67	62.295	ENSGAGG00000008582	SMARCAD1	65	65.579	Gopherus_agassizii
ENSFHEG00000012778	smarcad1a	100	62.483	ENSGGOG00000023001	SMARCAD1	94	65.321	Gorilla_gorilla
ENSFHEG00000012778	smarcad1a	65	81.170	ENSHBUG00000011042	smarcad1a	100	69.153	Haplochromis_burtoni
ENSFHEG00000012778	smarcad1a	100	59.217	ENSHCOG00000007848	smarcad1a	100	58.283	Hippocampus_comes
ENSFHEG00000012778	smarcad1a	66	69.028	ENSIPUG00000000242	smarcad1a	67	73.071	Ictalurus_punctatus
ENSFHEG00000012778	smarcad1a	71	71.736	ENSIPUG00000022817	smarcad1b	84	70.659	Ictalurus_punctatus
ENSFHEG00000012778	smarcad1a	100	63.481	ENSSTOG00000001227	SMARCAD1	95	65.022	Ictidomys_tridecemlineatus
ENSFHEG00000012778	smarcad1a	100	61.423	ENSJJAG00000022342	Smarcad1	97	65.321	Jaculus_jaculus
ENSFHEG00000012778	smarcad1a	99	71.693	ENSKMAG00000021351	smarcad1a	99	72.181	Kryptolebias_marmoratus
ENSFHEG00000012778	smarcad1a	100	67.308	ENSLBEG00000008088	smarcad1a	99	68.282	Labrus_bergylta
ENSFHEG00000012778	smarcad1a	83	73.926	ENSLOCG00000012909	smarcad1a	96	72.945	Lepisosteus_oculatus
ENSFHEG00000012778	smarcad1a	87	61.367	ENSLAFG00000000040	SMARCAD1	94	63.976	Loxodonta_africana
ENSFHEG00000012778	smarcad1a	92	62.483	ENSMFAG00000042606	SMARCAD1	94	65.321	Macaca_fascicularis
ENSFHEG00000012778	smarcad1a	92	62.483	ENSMMUG00000022242	SMARCAD1	90	65.321	Macaca_mulatta
ENSFHEG00000012778	smarcad1a	87	62.483	ENSMNEG00000038117	SMARCAD1	99	67.508	Macaca_nemestrina
ENSFHEG00000012778	smarcad1a	65	62.483	ENSMLEG00000038333	SMARCAD1	99	67.508	Mandrillus_leucophaeus
ENSFHEG00000012778	smarcad1a	100	69.982	ENSMAMG00000000933	smarcad1a	100	70.647	Mastacembelus_armatus
ENSFHEG00000012778	smarcad1a	65	80.878	ENSMZEG00005005203	smarcad1a	100	68.232	Maylandia_zebra
ENSFHEG00000012778	smarcad1a	81	65.094	ENSMGAG00000005577	SMARCAD1	92	65.094	Meleagris_gallopavo
ENSFHEG00000012778	smarcad1a	63	64.265	ENSMAUG00000008417	Smarcad1	65	65.172	Mesocricetus_auratus
ENSFHEG00000012778	smarcad1a	67	61.255	ENSMICG00000009746	SMARCAD1	65	65.127	Microcebus_murinus
ENSFHEG00000012778	smarcad1a	63	64.265	ENSMOCG00000017142	Smarcad1	65	65.172	Microtus_ochrogaster
ENSFHEG00000012778	smarcad1a	69	80.512	ENSMMOG00000000275	smarcad1a	99	81.016	Mola_mola
ENSFHEG00000012778	smarcad1a	88	62.676	ENSMODG00000019268	SMARCAD1	93	65.172	Monodelphis_domestica
ENSFHEG00000012778	smarcad1a	73	64.118	MGP_CAROLIEiJ_G0028458	-	62	65.022	Mus_caroli
ENSFHEG00000012778	smarcad1a	63	64.118	ENSMUSG00000029920	Smarcad1	65	65.022	Mus_musculus
ENSFHEG00000012778	smarcad1a	85	64.118	MGP_PahariEiJ_G0022198	Smarcad1	94	65.022	Mus_pahari
ENSFHEG00000012778	smarcad1a	63	64.118	MGP_SPRETEiJ_G0029462	Smarcad1	65	65.022	Mus_spretus
ENSFHEG00000012778	smarcad1a	87	62.219	ENSMLUG00000000425	SMARCAD1	94	65.075	Myotis_lucifugus
ENSFHEG00000012778	smarcad1a	87	63.824	ENSNGAG00000000810	Smarcad1	96	64.723	Nannospalax_galili
ENSFHEG00000012778	smarcad1a	63	81.341	ENSNBRG00000012749	smarcad1a	84	80.198	Neolamprologus_brichardi
ENSFHEG00000012778	smarcad1a	100	62.483	ENSNLEG00000014225	SMARCAD1	99	67.508	Nomascus_leucogenys
ENSFHEG00000012778	smarcad1a	87	62.901	ENSODEG00000004334	SMARCAD1	94	65.089	Octodon_degus
ENSFHEG00000012778	smarcad1a	82	83.775	ENSONIG00000015059	smarcad1a	99	81.166	Oreochromis_niloticus
ENSFHEG00000012778	smarcad1a	68	67.551	ENSOANG00000013764	SMARCAD1	99	65.522	Ornithorhynchus_anatinus
ENSFHEG00000012778	smarcad1a	89	62.343	ENSOCUG00000017283	SMARCAD1	97	64.645	Oryctolagus_cuniculus
ENSFHEG00000012778	smarcad1a	100	67.642	ENSORLG00000004869	smarcad1a	100	67.550	Oryzias_latipes
ENSFHEG00000012778	smarcad1a	100	68.007	ENSORLG00020020569	smarcad1a	100	67.550	Oryzias_latipes_hni
ENSFHEG00000012778	smarcad1a	100	67.459	ENSORLG00015009045	smarcad1a	100	67.367	Oryzias_latipes_hsok
ENSFHEG00000012778	smarcad1a	99	67.338	ENSOMEG00000023032	smarcad1a	99	66.789	Oryzias_melastigma
ENSFHEG00000012778	smarcad1a	65	61.892	ENSOGAG00000011444	SMARCAD1	65	64.680	Otolemur_garnettii
ENSFHEG00000012778	smarcad1a	65	62.483	ENSOARG00000017851	SMARCAD1	65	65.321	Ovis_aries
ENSFHEG00000012778	smarcad1a	100	62.483	ENSPPAG00000035715	SMARCAD1	94	65.321	Pan_paniscus
ENSFHEG00000012778	smarcad1a	87	62.674	ENSPPRG00000024756	SMARCAD1	99	67.677	Panthera_pardus
ENSFHEG00000012778	smarcad1a	87	62.500	ENSPTIG00000017868	SMARCAD1	94	65.276	Panthera_tigris_altaica
ENSFHEG00000012778	smarcad1a	100	62.483	ENSPTRG00000023126	SMARCAD1	99	67.508	Pan_troglodytes
ENSFHEG00000012778	smarcad1a	87	61.111	ENSPANG00000019757	SMARCAD1	93	65.282	Papio_anubis
ENSFHEG00000012778	smarcad1a	69	60.719	ENSPSIG00000010255	SMARCAD1	65	65.672	Pelodiscus_sinensis
ENSFHEG00000012778	smarcad1a	60	77.640	ENSPMGG00000010735	smarcad1a	94	77.039	Periophthalmus_magnuspinnatus
ENSFHEG00000012778	smarcad1a	86	55.636	ENSPEMG00000001854	Smarcad1	94	56.000	Peromyscus_maniculatus_bairdii
ENSFHEG00000012778	smarcad1a	96	53.825	ENSPMAG00000003516	smarcad1a	99	55.930	Petromyzon_marinus
ENSFHEG00000012778	smarcad1a	69	63.649	ENSPCIG00000008137	SMARCAD1	89	65.620	Phascolarctos_cinereus
ENSFHEG00000012778	smarcad1a	100	80.146	ENSPFOG00000019116	smarcad1a	100	79.417	Poecilia_formosa
ENSFHEG00000012778	smarcad1a	100	80.146	ENSPLAG00000000108	smarcad1a	100	79.599	Poecilia_latipinna
ENSFHEG00000012778	smarcad1a	100	80.237	ENSPMEG00000009155	smarcad1a	100	79.508	Poecilia_mexicana
ENSFHEG00000012778	smarcad1a	100	80.292	ENSPREG00000018185	smarcad1a	100	79.745	Poecilia_reticulata
ENSFHEG00000012778	smarcad1a	100	62.031	ENSPPYG00000014935	SMARCAD1	94	64.829	Pongo_abelii
ENSFHEG00000012778	smarcad1a	79	47.267	ENSPCOG00000020478	SMARCAD1	74	55.755	Propithecus_coquereli
ENSFHEG00000012778	smarcad1a	87	61.872	ENSPVAG00000001760	SMARCAD1	94	64.671	Pteropus_vampyrus
ENSFHEG00000012778	smarcad1a	64	79.913	ENSPNYG00000010087	smarcad1a	85	78.925	Pundamilia_nyererei
ENSFHEG00000012778	smarcad1a	94	66.314	ENSPNAG00000001663	smarcad1a	93	72.065	Pygocentrus_nattereri
ENSFHEG00000012778	smarcad1a	75	70.132	ENSPNAG00000010099	smarcad1b	89	71.407	Pygocentrus_nattereri
ENSFHEG00000012778	smarcad1a	63	64.265	ENSRNOG00000006391	Smarcad1	65	65.172	Rattus_norvegicus
ENSFHEG00000012778	smarcad1a	65	62.483	ENSRBIG00000041989	SMARCAD1	65	65.321	Rhinopithecus_bieti
ENSFHEG00000012778	smarcad1a	65	62.483	ENSRROG00000035309	SMARCAD1	65	65.321	Rhinopithecus_roxellana
ENSFHEG00000012778	smarcad1a	87	62.622	ENSSBOG00000032114	SMARCAD1	99	67.677	Saimiri_boliviensis_boliviensis
ENSFHEG00000012778	smarcad1a	86	63.362	ENSSHAG00000001279	SMARCAD1	94	65.321	Sarcophilus_harrisii
ENSFHEG00000012778	smarcad1a	100	60.703	ENSSFOG00015016814	smarcad1b	93	74.218	Scleropages_formosus
ENSFHEG00000012778	smarcad1a	63	71.033	ENSSFOG00015020909	smarcad1a	89	71.940	Scleropages_formosus
ENSFHEG00000012778	smarcad1a	100	70.927	ENSSMAG00000001326	smarcad1a	100	70.912	Scophthalmus_maximus
ENSFHEG00000012778	smarcad1a	71	78.222	ENSSDUG00000022338	smarcad1a	99	73.653	Seriola_dumerili
ENSFHEG00000012778	smarcad1a	100	68.909	ENSSLDG00000024986	smarcad1a	100	68.778	Seriola_lalandi_dorsalis
ENSFHEG00000012778	smarcad1a	55	67.227	ENSSPUG00000004633	SMARCAD1	99	67.227	Sphenodon_punctatus
ENSFHEG00000012778	smarcad1a	100	72.187	ENSSPAG00000001970	smarcad1a	100	72.040	Stegastes_partitus
ENSFHEG00000012778	smarcad1a	88	62.483	ENSSSCG00000009193	SMARCAD1	93	65.321	Sus_scrofa
ENSFHEG00000012778	smarcad1a	66	68.125	ENSTGUG00000003127	SMARCAD1	100	66.122	Taeniopygia_guttata
ENSFHEG00000012778	smarcad1a	91	78.431	ENSTNIG00000017585	smarcad1a	99	78.827	Tetraodon_nigroviridis
ENSFHEG00000012778	smarcad1a	75	69.643	ENSTBEG00000002789	SMARCAD1	84	69.643	Tupaia_belangeri
ENSFHEG00000012778	smarcad1a	90	62.117	ENSTTRG00000000226	SMARCAD1	81	64.925	Tursiops_truncatus
ENSFHEG00000012778	smarcad1a	87	62.396	ENSUAMG00000022262	SMARCAD1	94	65.321	Ursus_americanus
ENSFHEG00000012778	smarcad1a	87	62.396	ENSUMAG00000004549	SMARCAD1	94	65.321	Ursus_maritimus
ENSFHEG00000012778	smarcad1a	88	62.256	ENSVVUG00000007271	SMARCAD1	96	65.321	Vulpes_vulpes
ENSFHEG00000012778	smarcad1a	89	59.852	ENSXETG00000019214	smarcad1	100	59.556	Xenopus_tropicalis
ENSFHEG00000012778	smarcad1a	75	88.571	ENSXCOG00000005232	smarcad1a	87	90.214	Xiphophorus_couchianus
ENSFHEG00000012778	smarcad1a	100	80.383	ENSXMAG00000015350	smarcad1a	100	80.109	Xiphophorus_maculatus