EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000012865 (Gene tree)
Gene ID: 105937067
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 14614 bases
Position: chrKN811497.1:376453-391066
Accession: 105937067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000011368	TRM	PF02005.16	1.1e-138	1	1
ENSFHEP00000011386	TRM	PF02005.16	2.2e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000018343	-	1953	-	ENSFHEP00000011368	650 (aa)	-	-
ENSFHET00000018358	-	2528	XM_021324374	ENSFHEP00000011386	598 (aa)	XP_021180049	-

Gene Model

Click here to download ENSFHEG00000012865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012865	trmt1	88	69.565	ENSG00000104907	TRMT1	100	75.393	Homo_sapiens
ENSFHEG00000012865	trmt1	90	67.037	ENSAMEG00000012598	TRMT1	87	64.103	Ailuropoda_melanoleuca
ENSFHEG00000012865	trmt1	93	77.143	ENSACIG00000018680	trmt1	87	77.143	Amphilophus_citrinellus
ENSFHEG00000012865	trmt1	100	81.561	ENSAOCG00000006781	trmt1	91	81.561	Amphiprion_ocellaris
ENSFHEG00000012865	trmt1	100	81.728	ENSAPEG00000007712	trmt1	91	81.728	Amphiprion_percula
ENSFHEG00000012865	trmt1	100	80.000	ENSATEG00000001872	trmt1	91	80.000	Anabas_testudineus
ENSFHEG00000012865	trmt1	86	68.217	ENSACAG00000003825	TRMT1	83	68.411	Anolis_carolinensis
ENSFHEG00000012865	trmt1	90	66.667	ENSANAG00000023016	TRMT1	90	62.500	Aotus_nancymaae
ENSFHEG00000012865	trmt1	95	80.492	ENSACLG00000010073	trmt1	87	83.427	Astatotilapia_calliptera
ENSFHEG00000012865	trmt1	99	73.235	ENSAMXG00000012026	trmt1	89	73.235	Astyanax_mexicanus
ENSFHEG00000012865	trmt1	89	67.837	ENSBTAG00000019325	TRMT1	85	63.667	Bos_taurus
ENSFHEG00000012865	trmt1	85	40.734	WBGene00006613	trm-1	93	40.927	Caenorhabditis_elegans
ENSFHEG00000012865	trmt1	90	66.419	ENSCJAG00000004566	TRMT1	82	66.419	Callithrix_jacchus
ENSFHEG00000012865	trmt1	88	69.508	ENSCAFG00000017070	TRMT1	89	66.143	Canis_familiaris
ENSFHEG00000012865	trmt1	88	69.260	ENSCAFG00020005397	TRMT1	88	66.431	Canis_lupus_dingo
ENSFHEG00000012865	trmt1	89	68.081	ENSCHIG00000013569	TRMT1	82	68.081	Capra_hircus
ENSFHEG00000012865	trmt1	84	69.170	ENSTSYG00000003207	TRMT1	76	70.183	Carlito_syrichta
ENSFHEG00000012865	trmt1	79	68.201	ENSCAPG00000003355	TRMT1	88	68.410	Cavia_aperea
ENSFHEG00000012865	trmt1	90	67.037	ENSCPOG00000011754	TRMT1	81	67.222	Cavia_porcellus
ENSFHEG00000012865	trmt1	89	66.418	ENSCCAG00000022263	TRMT1	84	67.235	Cebus_capucinus
ENSFHEG00000012865	trmt1	81	54.713	ENSCATG00000038220	-	86	54.898	Cercocebus_atys
ENSFHEG00000012865	trmt1	90	68.148	ENSCATG00000039850	TRMT1	81	68.148	Cercocebus_atys
ENSFHEG00000012865	trmt1	98	64.587	ENSCLAG00000015295	TRMT1	93	61.695	Chinchilla_lanigera
ENSFHEG00000012865	trmt1	83	68.191	ENSCSAG00000006500	TRMT1	95	68.191	Chlorocebus_sabaeus
ENSFHEG00000012865	trmt1	86	72.763	ENSCPBG00000023866	TRMT1	77	72.957	Chrysemys_picta_bellii
ENSFHEG00000012865	trmt1	87	49.425	ENSCING00000002884	-	92	49.425	Ciona_intestinalis
ENSFHEG00000012865	trmt1	85	50.196	ENSCSAVG00000010927	-	96	49.130	Ciona_savignyi
ENSFHEG00000012865	trmt1	82	54.637	ENSCANG00000031650	-	77	54.747	Colobus_angolensis_palliatus
ENSFHEG00000012865	trmt1	88	54.064	ENSCANG00000040631	TRMT1	86	51.300	Colobus_angolensis_palliatus
ENSFHEG00000012865	trmt1	90	66.851	ENSCGRG00001022594	Trmt1	89	63.605	Cricetulus_griseus_chok1gshd
ENSFHEG00000012865	trmt1	90	66.851	ENSCGRG00000017732	Trmt1	88	63.605	Cricetulus_griseus_crigri
ENSFHEG00000012865	trmt1	99	76.519	ENSCSEG00000001643	trmt1	99	76.519	Cynoglossus_semilaevis
ENSFHEG00000012865	trmt1	100	87.625	ENSCVAG00000011886	trmt1	91	87.625	Cyprinodon_variegatus
ENSFHEG00000012865	trmt1	96	73.898	ENSDARG00000010978	trmt1	88	73.898	Danio_rerio
ENSFHEG00000012865	trmt1	77	45.842	ENSDNOG00000048240	-	87	43.883	Dasypus_novemcinctus
ENSFHEG00000012865	trmt1	90	65.741	ENSDORG00000014298	Trmt1	87	62.371	Dipodomys_ordii
ENSFHEG00000012865	trmt1	87	48.399	FBgn0032430	CG6388	89	48.776	Drosophila_melanogaster
ENSFHEG00000012865	trmt1	85	52.157	ENSEBUG00000003449	trmt1	74	52.250	Eptatretus_burgeri
ENSFHEG00000012865	trmt1	89	67.724	ENSEASG00005004050	TRMT1	91	64.605	Equus_asinus_asinus
ENSFHEG00000012865	trmt1	89	67.724	ENSECAG00000016149	TRMT1	91	64.605	Equus_caballus
ENSFHEG00000012865	trmt1	59	60.057	ENSEEUG00000014102	-	89	60.057	Erinaceus_europaeus
ENSFHEG00000012865	trmt1	97	71.901	ENSELUG00000021659	trmt1	91	71.901	Esox_lucius
ENSFHEG00000012865	trmt1	85	69.320	ENSFCAG00000000483	TRMT1	85	65.893	Felis_catus
ENSFHEG00000012865	trmt1	89	69.274	ENSFDAG00000007386	TRMT1	81	69.274	Fukomys_damarensis
ENSFHEG00000012865	trmt1	85	76.321	ENSGMOG00000006564	trmt1	89	76.321	Gadus_morhua
ENSFHEG00000012865	trmt1	100	85.284	ENSGAFG00000011862	trmt1	90	85.284	Gambusia_affinis
ENSFHEG00000012865	trmt1	95	77.817	ENSGACG00000000227	trmt1	89	78.345	Gasterosteus_aculeatus
ENSFHEG00000012865	trmt1	90	69.273	ENSGAGG00000016432	TRMT1	82	69.455	Gopherus_agassizii
ENSFHEG00000012865	trmt1	90	68.392	ENSGGOG00000014007	TRMT1	81	68.519	Gorilla_gorilla
ENSFHEG00000012865	trmt1	85	75.734	ENSHBUG00000008821	trmt1	85	75.734	Haplochromis_burtoni
ENSFHEG00000012865	trmt1	90	67.593	ENSHGLG00000015972	TRMT1	82	67.963	Heterocephalus_glaber_female
ENSFHEG00000012865	trmt1	83	67.400	ENSHGLG00100018112	TRMT1	81	67.400	Heterocephalus_glaber_male
ENSFHEG00000012865	trmt1	92	78.119	ENSHCOG00000009447	trmt1	85	78.119	Hippocampus_comes
ENSFHEG00000012865	trmt1	86	77.547	ENSIPUG00000002899	trmt1	78	78.261	Ictalurus_punctatus
ENSFHEG00000012865	trmt1	90	67.587	ENSSTOG00000012531	TRMT1	83	67.772	Ictidomys_tridecemlineatus
ENSFHEG00000012865	trmt1	90	67.956	ENSJJAG00000017154	Trmt1	82	68.140	Jaculus_jaculus
ENSFHEG00000012865	trmt1	99	84.590	ENSKMAG00000011809	trmt1	88	86.641	Kryptolebias_marmoratus
ENSFHEG00000012865	trmt1	100	78.232	ENSLBEG00000012703	trmt1	91	78.396	Labrus_bergylta
ENSFHEG00000012865	trmt1	86	61.228	ENSLACG00000014585	TRMT1	85	61.420	Latimeria_chalumnae
ENSFHEG00000012865	trmt1	80	78.216	ENSLOCG00000006479	trmt1	84	78.423	Lepisosteus_oculatus
ENSFHEG00000012865	trmt1	85	70.097	ENSLAFG00000014072	TRMT1	88	65.331	Loxodonta_africana
ENSFHEG00000012865	trmt1	90	68.148	ENSMFAG00000033143	TRMT1	81	68.148	Macaca_fascicularis
ENSFHEG00000012865	trmt1	90	65.562	ENSMMUG00000001167	TRMT1	85	65.562	Macaca_mulatta
ENSFHEG00000012865	trmt1	90	68.148	ENSMNEG00000037867	TRMT1	81	68.148	Macaca_nemestrina
ENSFHEG00000012865	trmt1	90	67.963	ENSMLEG00000016142	TRMT1	81	67.963	Mandrillus_leucophaeus
ENSFHEG00000012865	trmt1	96	82.017	ENSMAMG00000004357	trmt1	89	82.017	Mastacembelus_armatus
ENSFHEG00000012865	trmt1	100	78.702	ENSMZEG00005014510	trmt1	90	78.702	Maylandia_zebra
ENSFHEG00000012865	trmt1	86	68.859	ENSMAUG00000011134	Trmt1	85	65.125	Mesocricetus_auratus
ENSFHEG00000012865	trmt1	89	69.331	ENSMICG00000000793	TRMT1	88	65.636	Microcebus_murinus
ENSFHEG00000012865	trmt1	89	67.161	ENSMOCG00000015895	Trmt1	85	65.775	Microtus_ochrogaster
ENSFHEG00000012865	trmt1	93	81.441	ENSMMOG00000011097	trmt1	89	81.441	Mola_mola
ENSFHEG00000012865	trmt1	86	70.428	ENSMODG00000011619	TRMT1	83	70.623	Monodelphis_domestica
ENSFHEG00000012865	trmt1	90	67.339	MGP_CAROLIEiJ_G0031304	Trmt1	97	61.450	Mus_caroli
ENSFHEG00000012865	trmt1	90	67.468	ENSMUSG00000001909	Trmt1	97	61.923	Mus_musculus
ENSFHEG00000012865	trmt1	90	67.468	MGP_SPRETEiJ_G0032422	Trmt1	97	61.240	Mus_spretus
ENSFHEG00000012865	trmt1	85	70.097	ENSMPUG00000004210	TRMT1	80	66.786	Mustela_putorius_furo
ENSFHEG00000012865	trmt1	91	68.007	ENSMLUG00000012809	TRMT1	87	64.358	Myotis_lucifugus
ENSFHEG00000012865	trmt1	90	66.606	ENSNGAG00000022486	Trmt1	81	66.789	Nannospalax_galili
ENSFHEG00000012865	trmt1	73	90.647	ENSNBRG00000024376	trmt1	76	90.647	Neolamprologus_brichardi
ENSFHEG00000012865	trmt1	70	70.874	ENSNLEG00000013019	-	77	70.874	Nomascus_leucogenys
ENSFHEG00000012865	trmt1	85	69.380	ENSMEUG00000013756	TRMT1	87	69.574	Notamacropus_eugenii
ENSFHEG00000012865	trmt1	67	74.011	ENSOPRG00000009471	-	70	72.000	Ochotona_princeps
ENSFHEG00000012865	trmt1	89	68.843	ENSODEG00000010323	TRMT1	87	65.458	Octodon_degus
ENSFHEG00000012865	trmt1	100	82.529	ENSONIG00000000400	trmt1	88	85.688	Oreochromis_niloticus
ENSFHEG00000012865	trmt1	83	69.200	ENSOCUG00000021934	TRMT1	94	69.200	Oryctolagus_cuniculus
ENSFHEG00000012865	trmt1	97	74.830	ENSORLG00000020074	trmt1	88	78.018	Oryzias_latipes
ENSFHEG00000012865	trmt1	97	80.379	ENSORLG00020007561	trmt1	87	82.696	Oryzias_latipes_hni
ENSFHEG00000012865	trmt1	97	79.862	ENSORLG00015006547	trmt1	89	79.862	Oryzias_latipes_hsok
ENSFHEG00000012865	trmt1	98	79.287	ENSOMEG00000019343	trmt1	90	79.287	Oryzias_melastigma
ENSFHEG00000012865	trmt1	85	70.019	ENSOGAG00000025576	TRMT1	90	65.278	Otolemur_garnettii
ENSFHEG00000012865	trmt1	89	54.412	ENSOARG00000009397	TRMT1	83	52.381	Ovis_aries
ENSFHEG00000012865	trmt1	85	61.673	ENSPPRG00000012117	TRMT1	85	59.677	Panthera_pardus
ENSFHEG00000012865	trmt1	62	68.421	ENSPTIG00000008833	TRMT1	83	62.346	Panthera_tigris_altaica
ENSFHEG00000012865	trmt1	83	52.250	ENSPTRG00000050421	-	80	52.353	Pan_troglodytes
ENSFHEG00000012865	trmt1	88	69.565	ENSPTRG00000010557	TRMT1	80	69.697	Pan_troglodytes
ENSFHEG00000012865	trmt1	79	54.601	ENSPANG00000034058	-	83	55.532	Papio_anubis
ENSFHEG00000012865	trmt1	90	68.148	ENSPANG00000009247	TRMT1	81	68.148	Papio_anubis
ENSFHEG00000012865	trmt1	100	73.970	ENSPKIG00000005309	trmt1	91	73.970	Paramormyrops_kingsleyae
ENSFHEG00000012865	trmt1	90	58.577	ENSPSIG00000008762	TRMT1	77	58.684	Pelodiscus_sinensis
ENSFHEG00000012865	trmt1	90	81.633	ENSPMGG00000019764	trmt1	90	79.749	Periophthalmus_magnuspinnatus
ENSFHEG00000012865	trmt1	90	67.647	ENSPEMG00000016247	Trmt1	88	64.346	Peromyscus_maniculatus_bairdii
ENSFHEG00000012865	trmt1	85	66.211	ENSPMAG00000004329	trmt1	81	66.211	Petromyzon_marinus
ENSFHEG00000012865	trmt1	86	70.428	ENSPCIG00000019273	TRMT1	80	70.428	Phascolarctos_cinereus
ENSFHEG00000012865	trmt1	100	85.619	ENSPFOG00000008527	trmt1	90	85.619	Poecilia_formosa
ENSFHEG00000012865	trmt1	100	85.452	ENSPLAG00000018788	trmt1	99	85.452	Poecilia_latipinna
ENSFHEG00000012865	trmt1	100	85.619	ENSPMEG00000013120	trmt1	90	85.619	Poecilia_mexicana
ENSFHEG00000012865	trmt1	100	83.278	ENSPREG00000000211	trmt1	87	83.278	Poecilia_reticulata
ENSFHEG00000012865	trmt1	90	68.022	ENSPPYG00000009622	TRMT1	81	68.148	Pongo_abelii
ENSFHEG00000012865	trmt1	90	62.431	ENSPCAG00000003698	TRMT1	91	58.872	Procavia_capensis
ENSFHEG00000012865	trmt1	85	69.515	ENSPCOG00000008653	TRMT1	85	65.536	Propithecus_coquereli
ENSFHEG00000012865	trmt1	90	67.831	ENSPVAG00000015076	TRMT1	89	64.527	Pteropus_vampyrus
ENSFHEG00000012865	trmt1	89	81.921	ENSPNYG00000013960	trmt1	87	81.921	Pundamilia_nyererei
ENSFHEG00000012865	trmt1	88	71.375	ENSPNAG00000024859	trmt1	82	71.241	Pygocentrus_nattereri
ENSFHEG00000012865	trmt1	85	69.201	ENSRNOG00000002914	Trmt1	87	65.412	Rattus_norvegicus
ENSFHEG00000012865	trmt1	90	50.092	ENSRBIG00000037505	-	90	48.223	Rhinopithecus_bieti
ENSFHEG00000012865	trmt1	88	69.318	ENSRBIG00000038324	TRMT1	79	69.318	Rhinopithecus_bieti
ENSFHEG00000012865	trmt1	90	49.541	ENSRROG00000031847	-	89	47.716	Rhinopithecus_roxellana
ENSFHEG00000012865	trmt1	88	69.318	ENSRROG00000028599	TRMT1	79	69.318	Rhinopithecus_roxellana
ENSFHEG00000012865	trmt1	85	38.246	YDR120C	-	92	38.519	Saccharomyces_cerevisiae
ENSFHEG00000012865	trmt1	90	66.111	ENSSBOG00000028861	TRMT1	84	67.424	Saimiri_boliviensis_boliviensis
ENSFHEG00000012865	trmt1	86	71.262	ENSSHAG00000014381	TRMT1	84	71.262	Sarcophilus_harrisii
ENSFHEG00000012865	trmt1	89	80.451	ENSSFOG00015004139	trmt1	91	73.813	Scleropages_formosus
ENSFHEG00000012865	trmt1	99	79.967	ENSSMAG00000021136	trmt1	90	80.725	Scophthalmus_maximus
ENSFHEG00000012865	trmt1	99	80.263	ENSSDUG00000012740	trmt1	90	81.086	Seriola_dumerili
ENSFHEG00000012865	trmt1	99	79.770	ENSSLDG00000005971	trmt1	90	80.592	Seriola_lalandi_dorsalis
ENSFHEG00000012865	trmt1	89	64.576	ENSSARG00000005138	TRMT1	94	64.576	Sorex_araneus
ENSFHEG00000012865	trmt1	92	55.856	ENSSPUG00000001084	TRMT1	94	56.150	Sphenodon_punctatus
ENSFHEG00000012865	trmt1	100	80.565	ENSSPAG00000007153	trmt1	89	85.000	Stegastes_partitus
ENSFHEG00000012865	trmt1	89	68.030	ENSSSCG00000013744	TRMT1	91	64.384	Sus_scrofa
ENSFHEG00000012865	trmt1	87	80.529	ENSTRUG00000010700	trmt1	80	81.285	Takifugu_rubripes
ENSFHEG00000012865	trmt1	86	84.942	ENSTNIG00000018808	trmt1	89	84.942	Tetraodon_nigroviridis
ENSFHEG00000012865	trmt1	89	65.242	ENSTTRG00000006379	TRMT1	81	65.428	Tursiops_truncatus
ENSFHEG00000012865	trmt1	92	66.129	ENSUAMG00000022911	TRMT1	92	65.062	Ursus_americanus
ENSFHEG00000012865	trmt1	90	67.037	ENSUMAG00000006027	TRMT1	91	64.103	Ursus_maritimus
ENSFHEG00000012865	trmt1	88	69.697	ENSVVUG00000024177	TRMT1	86	66.318	Vulpes_vulpes
ENSFHEG00000012865	trmt1	77	70.716	ENSXETG00000033863	TRMT1	92	70.933	Xenopus_tropicalis
ENSFHEG00000012865	trmt1	100	85.786	ENSXCOG00000015733	trmt1	90	85.786	Xiphophorus_couchianus
ENSFHEG00000012865	trmt1	85	92.368	ENSXMAG00000013823	trmt1	89	92.368	Xiphophorus_maculatus