EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013037 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 36881 bases
Position: chrKN805780.1:272950-309830
Accession: 105917586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028692	La	PF05383.17	1.2e-13	1	1
ENSFHEP00000011518	La	PF05383.17	2.3e-10	1	1
ENSFHEP00000028667	La	PF05383.17	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000018522	LARP4B-202	555	-	ENSFHEP00000011518	184 (aa)	-	-
ENSFHET00000031634	LARP4B-203	2112	XM_021310563	ENSFHEP00000028692	703 (aa)	XP_021166238	-
ENSFHET00000018513	LARP4B-201	594	-	ENSFHEP00000028667	197 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000013037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013037	LARP4B	65	63.025	ENSFHEG00000013854	larp4ab	73	35.273
ENSFHEG00000013037	LARP4B	65	67.227	ENSFHEG00000004338	larp4aa	88	33.471
ENSFHEG00000013037	LARP4B	65	63.025	ENSFHEG00000011539	-	53	47.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013037	LARP4B	65	89.916	ENSG00000107929	LARP4B	100	51.348	Homo_sapiens
ENSFHEG00000013037	LARP4B	65	70.000	ENSAPOG00000020631	-	51	69.492	Acanthochromis_polyacanthus
ENSFHEG00000013037	LARP4B	100	69.730	ENSAPOG00000020531	LARP4B	100	69.701	Acanthochromis_polyacanthus
ENSFHEG00000013037	LARP4B	65	85.714	ENSAMEG00000001810	LARP4B	100	50.518	Ailuropoda_melanoleuca
ENSFHEG00000013037	LARP4B	65	98.319	ENSAOCG00000007887	-	89	84.971	Amphiprion_ocellaris
ENSFHEG00000013037	LARP4B	65	97.479	ENSAPEG00000002512	LARP4B	96	66.182	Amphiprion_percula
ENSFHEG00000013037	LARP4B	100	66.417	ENSATEG00000012614	LARP4B	100	67.215	Anabas_testudineus
ENSFHEG00000013037	LARP4B	65	93.277	ENSAPLG00000003813	LARP4B	98	52.842	Anas_platyrhynchos
ENSFHEG00000013037	LARP4B	65	93.277	ENSACAG00000002858	LARP4B	100	52.089	Anolis_carolinensis
ENSFHEG00000013037	LARP4B	65	89.076	ENSANAG00000007531	-	100	50.648	Aotus_nancymaae
ENSFHEG00000013037	LARP4B	100	72.352	ENSACLG00000026356	LARP4B	100	71.781	Astatotilapia_calliptera
ENSFHEG00000013037	LARP4B	64	84.615	ENSAMXG00000003335	larp4b	96	46.970	Astyanax_mexicanus
ENSFHEG00000013037	LARP4B	65	89.076	ENSBTAG00000013899	LARP4B	97	52.853	Bos_taurus
ENSFHEG00000013037	LARP4B	65	90.756	ENSCJAG00000018434	LARP4B	100	50.708	Callithrix_jacchus
ENSFHEG00000013037	LARP4B	65	89.916	ENSCAFG00020004209	LARP4B	100	52.078	Canis_lupus_dingo
ENSFHEG00000013037	LARP4B	65	89.076	ENSCHIG00000013543	LARP4B	97	51.757	Capra_hircus
ENSFHEG00000013037	LARP4B	65	90.756	ENSTSYG00000002568	LARP4B	100	55.859	Carlito_syrichta
ENSFHEG00000013037	LARP4B	65	89.076	ENSCAPG00000009725	LARP4B	82	49.919	Cavia_aperea
ENSFHEG00000013037	LARP4B	65	89.076	ENSCPOG00000009375	LARP4B	100	50.519	Cavia_porcellus
ENSFHEG00000013037	LARP4B	66	89.256	ENSCCAG00000024869	LARP4B	100	50.450	Cebus_capucinus
ENSFHEG00000013037	LARP4B	65	90.756	ENSCATG00000019750	LARP4B	100	51.226	Cercocebus_atys
ENSFHEG00000013037	LARP4B	65	89.916	ENSCLAG00000011570	LARP4B	100	51.638	Chinchilla_lanigera
ENSFHEG00000013037	LARP4B	63	88.889	ENSCHOG00000007831	-	58	88.889	Choloepus_hoffmanni
ENSFHEG00000013037	LARP4B	65	92.437	ENSCPBG00000017063	LARP4B	100	52.282	Chrysemys_picta_bellii
ENSFHEG00000013037	LARP4B	65	90.000	ENSCANG00000038021	LARP4B	100	49.419	Colobus_angolensis_palliatus
ENSFHEG00000013037	LARP4B	65	89.916	ENSCGRG00001022930	Larp4b	100	50.518	Cricetulus_griseus_chok1gshd
ENSFHEG00000013037	LARP4B	65	89.916	ENSCGRG00000006022	Larp4b	100	50.518	Cricetulus_griseus_crigri
ENSFHEG00000013037	LARP4B	100	65.753	ENSCSEG00000007342	LARP4B	100	65.432	Cynoglossus_semilaevis
ENSFHEG00000013037	LARP4B	68	58.594	ENSCSEG00000001202	-	86	59.690	Cynoglossus_semilaevis
ENSFHEG00000013037	LARP4B	100	71.802	ENSCVAG00000008910	LARP4B	100	71.671	Cyprinodon_variegatus
ENSFHEG00000013037	LARP4B	64	85.470	ENSDARG00000062146	larp4b	99	47.568	Danio_rerio
ENSFHEG00000013037	LARP4B	65	89.916	ENSDNOG00000045543	-	100	54.635	Dasypus_novemcinctus
ENSFHEG00000013037	LARP4B	64	90.678	ENSDORG00000009328	Larp4b	100	48.831	Dipodomys_ordii
ENSFHEG00000013037	LARP4B	80	50.534	ENSETEG00000011249	LARP4B	80	50.178	Echinops_telfairi
ENSFHEG00000013037	LARP4B	65	89.916	ENSEASG00005019068	-	100	51.362	Equus_asinus_asinus
ENSFHEG00000013037	LARP4B	65	89.916	ENSECAG00000024040	LARP4B	100	51.492	Equus_caballus
ENSFHEG00000013037	LARP4B	65	89.916	ENSEEUG00000008391	LARP4B	96	50.870	Erinaceus_europaeus
ENSFHEG00000013037	LARP4B	65	97.479	ENSELUG00000008626	LARP4B	100	57.463	Esox_lucius
ENSFHEG00000013037	LARP4B	65	76.471	ENSELUG00000001417	-	94	39.969	Esox_lucius
ENSFHEG00000013037	LARP4B	65	89.916	ENSFCAG00000000721	-	100	51.550	Felis_catus
ENSFHEG00000013037	LARP4B	65	93.277	ENSFALG00000006961	LARP4B	100	52.880	Ficedula_albicollis
ENSFHEG00000013037	LARP4B	65	89.916	ENSFDAG00000006158	LARP4B	97	51.105	Fukomys_damarensis
ENSFHEG00000013037	LARP4B	65	91.597	ENSGMOG00000010818	-	100	54.880	Gadus_morhua
ENSFHEG00000013037	LARP4B	65	93.277	ENSGALG00000006672	LARP4B	100	51.756	Gallus_gallus
ENSFHEG00000013037	LARP4B	65	96.639	ENSGAFG00000002038	-	72	82.879	Gambusia_affinis
ENSFHEG00000013037	LARP4B	100	65.228	ENSGACG00000017535	LARP4B	98	65.696	Gasterosteus_aculeatus
ENSFHEG00000013037	LARP4B	65	92.437	ENSGAGG00000008598	LARP4B	87	56.039	Gopherus_agassizii
ENSFHEG00000013037	LARP4B	65	89.916	ENSGGOG00000003572	LARP4B	100	51.220	Gorilla_gorilla
ENSFHEG00000013037	LARP4B	100	69.060	ENSHBUG00000007535	LARP4B	100	69.060	Haplochromis_burtoni
ENSFHEG00000013037	LARP4B	65	89.916	ENSHGLG00000012936	LARP4B	100	50.713	Heterocephalus_glaber_female
ENSFHEG00000013037	LARP4B	61	85.841	ENSHGLG00100017261	-	100	46.751	Heterocephalus_glaber_male
ENSFHEG00000013037	LARP4B	65	89.916	ENSHGLG00100016220	-	100	50.845	Heterocephalus_glaber_male
ENSFHEG00000013037	LARP4B	99	60.459	ENSHCOG00000011581	LARP4B	89	60.651	Hippocampus_comes
ENSFHEG00000013037	LARP4B	64	85.470	ENSIPUG00000009705	larp4b	96	47.191	Ictalurus_punctatus
ENSFHEG00000013037	LARP4B	65	89.916	ENSSTOG00000000587	LARP4B	100	51.181	Ictidomys_tridecemlineatus
ENSFHEG00000013037	LARP4B	65	89.916	ENSJJAG00000020847	Larp4b	100	51.039	Jaculus_jaculus
ENSFHEG00000013037	LARP4B	100	68.668	ENSKMAG00000021674	LARP4B	100	68.668	Kryptolebias_marmoratus
ENSFHEG00000013037	LARP4B	65	97.479	ENSLBEG00000025293	-	88	65.198	Labrus_bergylta
ENSFHEG00000013037	LARP4B	65	92.437	ENSLACG00000009492	LARP4B	87	54.502	Latimeria_chalumnae
ENSFHEG00000013037	LARP4B	65	92.437	ENSLOCG00000012290	larp4b	100	54.698	Lepisosteus_oculatus
ENSFHEG00000013037	LARP4B	65	90.756	ENSLAFG00000015334	LARP4B	100	51.226	Loxodonta_africana
ENSFHEG00000013037	LARP4B	65	90.756	ENSMFAG00000001766	LARP4B	100	49.419	Macaca_fascicularis
ENSFHEG00000013037	LARP4B	65	90.756	ENSMMUG00000005279	LARP4B	100	51.226	Macaca_mulatta
ENSFHEG00000013037	LARP4B	65	90.756	ENSMNEG00000014019	LARP4B	100	49.419	Macaca_nemestrina
ENSFHEG00000013037	LARP4B	65	90.756	ENSMLEG00000035198	LARP4B	100	51.226	Mandrillus_leucophaeus
ENSFHEG00000013037	LARP4B	100	65.404	ENSMAMG00000013742	LARP4B	100	64.581	Mastacembelus_armatus
ENSFHEG00000013037	LARP4B	65	96.639	ENSMZEG00005014594	-	100	66.259	Maylandia_zebra
ENSFHEG00000013037	LARP4B	100	67.538	ENSMZEG00005006498	-	100	67.123	Maylandia_zebra
ENSFHEG00000013037	LARP4B	65	93.277	ENSMGAG00000005472	LARP4B	100	51.292	Meleagris_gallopavo
ENSFHEG00000013037	LARP4B	65	89.916	ENSMAUG00000021657	Larp4b	100	50.194	Mesocricetus_auratus
ENSFHEG00000013037	LARP4B	65	90.756	ENSMICG00000001301	LARP4B	100	50.792	Microcebus_murinus
ENSFHEG00000013037	LARP4B	65	89.916	ENSMOCG00000021452	Larp4b	86	54.045	Microtus_ochrogaster
ENSFHEG00000013037	LARP4B	100	64.355	ENSMMOG00000011253	-	100	65.187	Mola_mola
ENSFHEG00000013037	LARP4B	65	89.076	ENSMODG00000005957	LARP4B	100	49.935	Monodelphis_domestica
ENSFHEG00000013037	LARP4B	100	58.872	ENSMALG00000012432	LARP4B	100	60.110	Monopterus_albus
ENSFHEG00000013037	LARP4B	65	89.916	MGP_CAROLIEiJ_G0018216	Larp4b	100	50.973	Mus_caroli
ENSFHEG00000013037	LARP4B	65	89.916	ENSMUSG00000033499	Larp4b	100	51.358	Mus_musculus
ENSFHEG00000013037	LARP4B	65	89.916	MGP_PahariEiJ_G0019266	Larp4b	100	51.102	Mus_pahari
ENSFHEG00000013037	LARP4B	65	89.916	MGP_SPRETEiJ_G0019074	Larp4b	100	51.229	Mus_spretus
ENSFHEG00000013037	LARP4B	65	89.916	ENSMPUG00000016220	LARP4B	97	51.351	Mustela_putorius_furo
ENSFHEG00000013037	LARP4B	65	89.916	ENSMLUG00000005880	LARP4B	97	51.520	Myotis_lucifugus
ENSFHEG00000013037	LARP4B	65	89.916	ENSNGAG00000001750	Larp4b	100	50.779	Nannospalax_galili
ENSFHEG00000013037	LARP4B	100	62.448	ENSNBRG00000020018	LARP4B	100	62.587	Neolamprologus_brichardi
ENSFHEG00000013037	LARP4B	65	89.916	ENSNLEG00000013442	LARP4B	100	51.348	Nomascus_leucogenys
ENSFHEG00000013037	LARP4B	85	46.457	ENSMEUG00000013114	-	83	46.063	Notamacropus_eugenii
ENSFHEG00000013037	LARP4B	65	88.235	ENSOPRG00000003300	LARP4B	100	48.520	Ochotona_princeps
ENSFHEG00000013037	LARP4B	100	47.403	ENSODEG00000001109	LARP4B	100	47.143	Octodon_degus
ENSFHEG00000013037	LARP4B	100	69.290	ENSONIG00000017705	LARP4B	100	69.588	Oreochromis_niloticus
ENSFHEG00000013037	LARP4B	65	93.277	ENSOANG00000006100	LARP4B	100	50.904	Ornithorhynchus_anatinus
ENSFHEG00000013037	LARP4B	65	90.756	ENSOCUG00000004950	LARP4B	97	49.180	Oryctolagus_cuniculus
ENSFHEG00000013037	LARP4B	100	66.033	ENSORLG00000006080	LARP4B	100	65.906	Oryzias_latipes
ENSFHEG00000013037	LARP4B	100	66.711	ENSORLG00020020940	LARP4B	100	66.579	Oryzias_latipes_hni
ENSFHEG00000013037	LARP4B	100	67.150	ENSORLG00015020608	LARP4B	100	67.018	Oryzias_latipes_hsok
ENSFHEG00000013037	LARP4B	100	65.490	ENSOMEG00000019619	LARP4B	100	65.621	Oryzias_melastigma
ENSFHEG00000013037	LARP4B	65	92.437	ENSOGAG00000011540	LARP4B	99	50.691	Otolemur_garnettii
ENSFHEG00000013037	LARP4B	65	89.076	ENSOARG00000015320	LARP4B	95	51.682	Ovis_aries
ENSFHEG00000013037	LARP4B	65	89.916	ENSPPAG00000039232	LARP4B	100	51.476	Pan_paniscus
ENSFHEG00000013037	LARP4B	65	89.916	ENSPPRG00000009489	LARP4B	100	51.429	Panthera_pardus
ENSFHEG00000013037	LARP4B	65	89.916	ENSPTIG00000008543	LARP4B	100	51.429	Panthera_tigris_altaica
ENSFHEG00000013037	LARP4B	65	89.916	ENSPTRG00000002235	LARP4B	100	51.476	Pan_troglodytes
ENSFHEG00000013037	LARP4B	65	90.756	ENSPANG00000023546	LARP4B	100	49.419	Papio_anubis
ENSFHEG00000013037	LARP4B	65	89.076	ENSPKIG00000012368	LARP4B	96	53.166	Paramormyrops_kingsleyae
ENSFHEG00000013037	LARP4B	65	92.437	ENSPSIG00000005600	LARP4B	92	58.716	Pelodiscus_sinensis
ENSFHEG00000013037	LARP4B	67	49.593	ENSPMGG00000023487	-	74	48.000	Periophthalmus_magnuspinnatus
ENSFHEG00000013037	LARP4B	65	95.798	ENSPMGG00000008261	LARP4B	91	56.389	Periophthalmus_magnuspinnatus
ENSFHEG00000013037	LARP4B	65	89.916	ENSPEMG00000014052	Larp4b	100	50.130	Peromyscus_maniculatus_bairdii
ENSFHEG00000013037	LARP4B	100	70.213	ENSPFOG00000000029	LARP4B	100	69.462	Poecilia_formosa
ENSFHEG00000013037	LARP4B	100	76.060	ENSPLAG00000002871	LARP4B	100	75.923	Poecilia_latipinna
ENSFHEG00000013037	LARP4B	100	72.135	ENSPMEG00000016361	LARP4B	100	72.005	Poecilia_mexicana
ENSFHEG00000013037	LARP4B	65	89.916	ENSPPYG00000002035	LARP4B	97	50.769	Pongo_abelii
ENSFHEG00000013037	LARP4B	65	90.756	ENSPCOG00000014688	LARP4B	100	50.850	Propithecus_coquereli
ENSFHEG00000013037	LARP4B	83	52.480	ENSPVAG00000009784	LARP4B	83	52.716	Pteropus_vampyrus
ENSFHEG00000013037	LARP4B	100	69.713	ENSPNYG00000024252	LARP4B	100	69.713	Pundamilia_nyererei
ENSFHEG00000013037	LARP4B	64	85.470	ENSPNAG00000028956	larp4b	97	47.486	Pygocentrus_nattereri
ENSFHEG00000013037	LARP4B	65	89.916	ENSRNOG00000015888	Larp4b	100	51.036	Rattus_norvegicus
ENSFHEG00000013037	LARP4B	65	90.756	ENSRBIG00000033294	LARP4B	100	51.226	Rhinopithecus_bieti
ENSFHEG00000013037	LARP4B	65	90.756	ENSRROG00000033879	LARP4B	100	51.226	Rhinopithecus_roxellana
ENSFHEG00000013037	LARP4B	100	46.623	ENSSBOG00000021109	LARP4B	100	45.935	Saimiri_boliviensis_boliviensis
ENSFHEG00000013037	LARP4B	65	89.076	ENSSHAG00000013392	LARP4B	100	51.507	Sarcophilus_harrisii
ENSFHEG00000013037	LARP4B	65	91.597	ENSSFOG00015003256	LARP4B	90	54.631	Scleropages_formosus
ENSFHEG00000013037	LARP4B	84	96.552	ENSSMAG00000005982	-	99	96.552	Scophthalmus_maximus
ENSFHEG00000013037	LARP4B	100	69.645	ENSSDUG00000006704	LARP4B	100	69.514	Seriola_dumerili
ENSFHEG00000013037	LARP4B	100	66.301	ENSSLDG00000020660	LARP4B	92	73.301	Seriola_lalandi_dorsalis
ENSFHEG00000013037	LARP4B	68	85.981	ENSSARG00000001243	-	79	85.981	Sorex_araneus
ENSFHEG00000013037	LARP4B	65	92.437	ENSSPUG00000002102	-	100	53.992	Sphenodon_punctatus
ENSFHEG00000013037	LARP4B	65	90.756	ENSSPUG00000013734	-	91	55.246	Sphenodon_punctatus
ENSFHEG00000013037	LARP4B	100	68.587	ENSSPAG00000014628	LARP4B	100	68.450	Stegastes_partitus
ENSFHEG00000013037	LARP4B	65	89.076	ENSSSCG00000011162	LARP4B	96	54.484	Sus_scrofa
ENSFHEG00000013037	LARP4B	64	94.068	ENSTGUG00000013982	-	100	93.284	Taeniopygia_guttata
ENSFHEG00000013037	LARP4B	65	93.277	ENSTGUG00000000811	-	100	52.163	Taeniopygia_guttata
ENSFHEG00000013037	LARP4B	99	63.069	ENSTNIG00000007991	LARP4B	99	62.949	Tetraodon_nigroviridis
ENSFHEG00000013037	LARP4B	100	64.844	ENSTNIG00000004571	-	98	65.285	Tetraodon_nigroviridis
ENSFHEG00000013037	LARP4B	65	89.076	ENSTTRG00000011151	LARP4B	83	52.871	Tursiops_truncatus
ENSFHEG00000013037	LARP4B	65	89.916	ENSUAMG00000016461	LARP4B	95	53.111	Ursus_americanus
ENSFHEG00000013037	LARP4B	65	89.916	ENSUMAG00000016127	LARP4B	100	51.299	Ursus_maritimus
ENSFHEG00000013037	LARP4B	65	85.714	ENSVPAG00000000128	-	64	80.000	Vicugna_pacos
ENSFHEG00000013037	LARP4B	65	89.916	ENSVVUG00000008641	LARP4B	100	51.688	Vulpes_vulpes
ENSFHEG00000013037	LARP4B	65	92.437	ENSXETG00000016882	larp4b	97	52.497	Xenopus_tropicalis
ENSFHEG00000013037	LARP4B	100	67.995	ENSXCOG00000019952	LARP4B	100	67.862	Xiphophorus_couchianus
ENSFHEG00000013037	LARP4B	100	71.169	ENSXMAG00000021533	LARP4B	100	70.779	Xiphophorus_maculatus