EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013039 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 21812 bases
Position: chrKN811429.1:466148-487959
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000011546	XRN_N	PF03159.18	2.8e-68	1	2
ENSFHEP00000011546	XRN_N	PF03159.18	2.8e-68	2	2
ENSFHEP00000011522	XRN_N	PF03159.18	7.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000018529	-	306	-	ENSFHEP00000011522	101 (aa)	-	-
ENSFHET00000018564	-	1527	-	ENSFHEP00000011546	508 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000013039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013039	xrn2	93	57.282	ENSFHEG00000017255	-	100	57.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013039	xrn2	98	69.466	ENSG00000088930	XRN2	54	69.466	Homo_sapiens
ENSFHEG00000013039	xrn2	98	84.483	ENSAPOG00000009818	xrn2	53	84.483	Acanthochromis_polyacanthus
ENSFHEG00000013039	xrn2	98	69.847	ENSAMEG00000012581	XRN2	54	69.847	Ailuropoda_melanoleuca
ENSFHEG00000013039	xrn2	98	81.731	ENSACIG00000015047	xrn2	95	81.574	Amphilophus_citrinellus
ENSFHEG00000013039	xrn2	98	85.057	ENSAOCG00000023632	xrn2	53	85.057	Amphiprion_ocellaris
ENSFHEG00000013039	xrn2	98	84.866	ENSAPEG00000014871	xrn2	53	84.866	Amphiprion_percula
ENSFHEG00000013039	xrn2	98	84.483	ENSATEG00000001273	xrn2	54	84.483	Anabas_testudineus
ENSFHEG00000013039	xrn2	93	70.281	ENSAPLG00000013869	XRN2	52	70.281	Anas_platyrhynchos
ENSFHEG00000013039	xrn2	98	69.333	ENSACAG00000005565	XRN2	53	69.333	Anolis_carolinensis
ENSFHEG00000013039	xrn2	98	69.847	ENSANAG00000020126	XRN2	55	69.847	Aotus_nancymaae
ENSFHEG00000013039	xrn2	98	89.899	ENSACLG00000010522	xrn2	99	89.899	Astatotilapia_calliptera
ENSFHEG00000013039	xrn2	98	79.732	ENSAMXG00000018301	xrn2	54	79.732	Astyanax_mexicanus
ENSFHEG00000013039	xrn2	98	70.038	ENSBTAG00000011304	XRN2	55	70.038	Bos_taurus
ENSFHEG00000013039	xrn2	93	61.983	WBGene00006964	xrn-2	55	50.735	Caenorhabditis_elegans
ENSFHEG00000013039	xrn2	98	69.847	ENSCJAG00000005611	XRN2	55	69.847	Callithrix_jacchus
ENSFHEG00000013039	xrn2	98	69.847	ENSCAFG00000005185	XRN2	54	69.847	Canis_familiaris
ENSFHEG00000013039	xrn2	98	69.847	ENSCAFG00020027479	XRN2	54	69.847	Canis_lupus_dingo
ENSFHEG00000013039	xrn2	98	69.466	ENSCHIG00000006921	XRN2	54	69.466	Capra_hircus
ENSFHEG00000013039	xrn2	98	70.038	ENSTSYG00000008315	XRN2	54	70.038	Carlito_syrichta
ENSFHEG00000013039	xrn2	98	69.847	ENSCPOG00000009407	XRN2	54	69.847	Cavia_porcellus
ENSFHEG00000013039	xrn2	98	69.466	ENSCATG00000040350	XRN2	54	69.466	Cercocebus_atys
ENSFHEG00000013039	xrn2	98	69.847	ENSCLAG00000013419	XRN2	54	69.847	Chinchilla_lanigera
ENSFHEG00000013039	xrn2	98	69.466	ENSCSAG00000011094	XRN2	54	69.466	Chlorocebus_sabaeus
ENSFHEG00000013039	xrn2	98	71.183	ENSCPBG00000023533	XRN2	53	71.183	Chrysemys_picta_bellii
ENSFHEG00000013039	xrn2	93	61.983	ENSCING00000022336	-	61	58.745	Ciona_intestinalis
ENSFHEG00000013039	xrn2	93	61.667	ENSCSAVG00000011217	-	96	57.950	Ciona_savignyi
ENSFHEG00000013039	xrn2	98	69.466	ENSCANG00000040240	XRN2	54	69.466	Colobus_angolensis_palliatus
ENSFHEG00000013039	xrn2	98	70.420	ENSCGRG00001010676	Xrn2	55	70.802	Cricetulus_griseus_chok1gshd
ENSFHEG00000013039	xrn2	75	88.158	ENSCGRG00000006378	Xrn2	52	69.880	Cricetulus_griseus_crigri
ENSFHEG00000013039	xrn2	98	72.937	ENSCSEG00000005628	xrn2	100	72.745	Cynoglossus_semilaevis
ENSFHEG00000013039	xrn2	98	87.356	ENSCVAG00000018999	xrn2	97	87.356	Cyprinodon_variegatus
ENSFHEG00000013039	xrn2	99	77.505	ENSDARG00000101900	xrn2	97	77.505	Danio_rerio
ENSFHEG00000013039	xrn2	98	70.038	ENSDNOG00000001895	XRN2	54	70.038	Dasypus_novemcinctus
ENSFHEG00000013039	xrn2	98	69.656	ENSDORG00000005434	Xrn2	55	69.656	Dipodomys_ordii
ENSFHEG00000013039	xrn2	93	65.574	FBgn0031868	Rat1	51	57.479	Drosophila_melanogaster
ENSFHEG00000013039	xrn2	98	66.917	ENSEBUG00000016136	xrn2	64	66.917	Eptatretus_burgeri
ENSFHEG00000013039	xrn2	98	69.847	ENSEASG00005002484	XRN2	54	69.847	Equus_asinus_asinus
ENSFHEG00000013039	xrn2	88	88.462	ENSECAG00000018988	XRN2	55	69.303	Equus_caballus
ENSFHEG00000013039	xrn2	98	80.651	ENSELUG00000000552	xrn2	53	80.651	Esox_lucius
ENSFHEG00000013039	xrn2	98	69.847	ENSFCAG00000007970	XRN2	56	69.847	Felis_catus
ENSFHEG00000013039	xrn2	98	71.264	ENSFALG00000004508	XRN2	54	71.264	Ficedula_albicollis
ENSFHEG00000013039	xrn2	98	69.847	ENSFDAG00000016311	XRN2	54	69.847	Fukomys_damarensis
ENSFHEG00000013039	xrn2	98	73.563	ENSGMOG00000013436	xrn2	61	73.563	Gadus_morhua
ENSFHEG00000013039	xrn2	98	70.690	ENSGALG00000008372	XRN2	54	70.690	Gallus_gallus
ENSFHEG00000013039	xrn2	98	86.015	ENSGAFG00000014284	xrn2	92	88.665	Gambusia_affinis
ENSFHEG00000013039	xrn2	99	79.317	ENSGACG00000011870	xrn2	97	79.127	Gasterosteus_aculeatus
ENSFHEG00000013039	xrn2	98	70.992	ENSGAGG00000004884	XRN2	53	70.992	Gopherus_agassizii
ENSFHEG00000013039	xrn2	98	69.466	ENSGGOG00000013738	XRN2	54	69.466	Gorilla_gorilla
ENSFHEG00000013039	xrn2	98	89.899	ENSHBUG00000005077	xrn2	99	89.899	Haplochromis_burtoni
ENSFHEG00000013039	xrn2	98	67.939	ENSHGLG00000014831	XRN2	53	67.939	Heterocephalus_glaber_female
ENSFHEG00000013039	xrn2	98	67.939	ENSHGLG00100013130	XRN2	53	67.939	Heterocephalus_glaber_male
ENSFHEG00000013039	xrn2	98	80.497	ENSHCOG00000011994	xrn2	53	80.688	Hippocampus_comes
ENSFHEG00000013039	xrn2	98	80.497	ENSIPUG00000006639	xrn2	54	80.497	Ictalurus_punctatus
ENSFHEG00000013039	xrn2	98	69.656	ENSSTOG00000000589	XRN2	54	69.656	Ictidomys_tridecemlineatus
ENSFHEG00000013039	xrn2	98	70.038	ENSJJAG00000022128	Xrn2	54	70.038	Jaculus_jaculus
ENSFHEG00000013039	xrn2	79	73.196	ENSKMAG00000002078	-	96	86.792	Kryptolebias_marmoratus
ENSFHEG00000013039	xrn2	98	84.000	ENSLBEG00000010041	xrn2	98	84.000	Labrus_bergylta
ENSFHEG00000013039	xrn2	95	71.150	ENSLACG00000008307	XRN2	60	70.833	Latimeria_chalumnae
ENSFHEG00000013039	xrn2	98	75.432	ENSLOCG00000016874	xrn2	55	75.427	Lepisosteus_oculatus
ENSFHEG00000013039	xrn2	98	70.038	ENSLAFG00000014624	XRN2	54	70.038	Loxodonta_africana
ENSFHEG00000013039	xrn2	98	69.466	ENSMFAG00000038122	XRN2	54	69.466	Macaca_fascicularis
ENSFHEG00000013039	xrn2	98	69.466	ENSMMUG00000011405	XRN2	54	69.466	Macaca_mulatta
ENSFHEG00000013039	xrn2	98	69.466	ENSMNEG00000040626	XRN2	54	69.466	Macaca_nemestrina
ENSFHEG00000013039	xrn2	98	69.275	ENSMLEG00000041897	XRN2	54	69.275	Mandrillus_leucophaeus
ENSFHEG00000013039	xrn2	98	84.674	ENSMAMG00000008633	xrn2	54	84.674	Mastacembelus_armatus
ENSFHEG00000013039	xrn2	98	82.950	ENSMZEG00005022362	xrn2	94	82.592	Maylandia_zebra
ENSFHEG00000013039	xrn2	98	69.772	ENSMGAG00000003196	XRN2	54	69.772	Meleagris_gallopavo
ENSFHEG00000013039	xrn2	98	70.229	ENSMAUG00000021842	Xrn2	54	70.229	Mesocricetus_auratus
ENSFHEG00000013039	xrn2	98	69.847	ENSMICG00000008126	XRN2	54	69.847	Microcebus_murinus
ENSFHEG00000013039	xrn2	98	69.582	ENSMOCG00000012588	Xrn2	54	69.962	Microtus_ochrogaster
ENSFHEG00000013039	xrn2	98	83.142	ENSMMOG00000017576	xrn2	95	79.119	Mola_mola
ENSFHEG00000013039	xrn2	98	70.420	ENSMODG00000006163	XRN2	54	70.342	Monodelphis_domestica
ENSFHEG00000013039	xrn2	98	83.716	ENSMALG00000011355	xrn2	95	83.716	Monopterus_albus
ENSFHEG00000013039	xrn2	98	69.962	MGP_CAROLIEiJ_G0024400	Xrn2	54	69.962	Mus_caroli
ENSFHEG00000013039	xrn2	98	69.962	ENSMUSG00000027433	Xrn2	54	69.962	Mus_musculus
ENSFHEG00000013039	xrn2	98	69.962	MGP_PahariEiJ_G0025843	Xrn2	54	69.962	Mus_pahari
ENSFHEG00000013039	xrn2	98	69.962	MGP_SPRETEiJ_G0025318	Xrn2	54	69.962	Mus_spretus
ENSFHEG00000013039	xrn2	98	69.598	ENSMLUG00000001536	XRN2	54	69.598	Myotis_lucifugus
ENSFHEG00000013039	xrn2	98	70.038	ENSNGAG00000018138	Xrn2	54	70.038	Nannospalax_galili
ENSFHEG00000013039	xrn2	98	89.899	ENSNBRG00000008062	xrn2	99	89.899	Neolamprologus_brichardi
ENSFHEG00000013039	xrn2	98	69.466	ENSNLEG00000009991	XRN2	54	69.466	Nomascus_leucogenys
ENSFHEG00000013039	xrn2	98	70.152	ENSODEG00000010745	-	54	70.152	Octodon_degus
ENSFHEG00000013039	xrn2	95	63.209	ENSODEG00000000860	-	54	62.427	Octodon_degus
ENSFHEG00000013039	xrn2	98	83.716	ENSONIG00000018720	xrn2	51	83.716	Oreochromis_niloticus
ENSFHEG00000013039	xrn2	98	70.420	ENSOANG00000015673	XRN2	54	70.420	Ornithorhynchus_anatinus
ENSFHEG00000013039	xrn2	98	69.847	ENSOCUG00000013468	XRN2	54	69.847	Oryctolagus_cuniculus
ENSFHEG00000013039	xrn2	98	82.759	ENSORLG00000017213	xrn2	58	82.759	Oryzias_latipes
ENSFHEG00000013039	xrn2	98	82.759	ENSORLG00020001824	xrn2	54	82.759	Oryzias_latipes_hni
ENSFHEG00000013039	xrn2	98	82.375	ENSORLG00015019747	xrn2	54	82.375	Oryzias_latipes_hsok
ENSFHEG00000013039	xrn2	98	82.567	ENSOMEG00000019820	xrn2	53	82.567	Oryzias_melastigma
ENSFHEG00000013039	xrn2	98	69.772	ENSOGAG00000001068	XRN2	54	69.772	Otolemur_garnettii
ENSFHEG00000013039	xrn2	75	86.842	ENSOARG00000004443	XRN2	52	68.474	Ovis_aries
ENSFHEG00000013039	xrn2	98	69.466	ENSPPAG00000033549	XRN2	54	69.466	Pan_paniscus
ENSFHEG00000013039	xrn2	98	69.847	ENSPPRG00000008732	XRN2	54	69.847	Panthera_pardus
ENSFHEG00000013039	xrn2	75	88.158	ENSPTIG00000015683	XRN2	51	68.876	Panthera_tigris_altaica
ENSFHEG00000013039	xrn2	98	69.466	ENSPTRG00000013308	XRN2	54	69.466	Pan_troglodytes
ENSFHEG00000013039	xrn2	98	69.466	ENSPANG00000018088	XRN2	54	69.466	Papio_anubis
ENSFHEG00000013039	xrn2	98	79.310	ENSPKIG00000016889	xrn2	54	79.310	Paramormyrops_kingsleyae
ENSFHEG00000013039	xrn2	87	69.574	ENSPSIG00000014666	XRN2	60	69.574	Pelodiscus_sinensis
ENSFHEG00000013039	xrn2	98	69.962	ENSPEMG00000000111	Xrn2	54	69.962	Peromyscus_maniculatus_bairdii
ENSFHEG00000013039	xrn2	61	63.050	ENSPMAG00000002576	xrn2	99	63.050	Petromyzon_marinus
ENSFHEG00000013039	xrn2	98	86.207	ENSPFOG00000004182	xrn2	54	86.207	Poecilia_formosa
ENSFHEG00000013039	xrn2	98	86.398	ENSPLAG00000007351	xrn2	58	86.398	Poecilia_latipinna
ENSFHEG00000013039	xrn2	87	85.043	ENSPMEG00000011798	xrn2	51	85.043	Poecilia_mexicana
ENSFHEG00000013039	xrn2	98	86.398	ENSPREG00000012452	xrn2	58	86.398	Poecilia_reticulata
ENSFHEG00000013039	xrn2	98	69.466	ENSPPYG00000010755	XRN2	54	69.466	Pongo_abelii
ENSFHEG00000013039	xrn2	98	69.656	ENSPCAG00000011191	XRN2	53	69.656	Procavia_capensis
ENSFHEG00000013039	xrn2	98	67.857	ENSPCOG00000016468	XRN2	52	67.857	Propithecus_coquereli
ENSFHEG00000013039	xrn2	98	79.885	ENSPNYG00000001765	xrn2	94	79.497	Pundamilia_nyererei
ENSFHEG00000013039	xrn2	98	78.011	ENSPNAG00000010956	xrn2	54	78.011	Pygocentrus_nattereri
ENSFHEG00000013039	xrn2	98	70.420	ENSRNOG00000011785	Xrn2	54	70.420	Rattus_norvegicus
ENSFHEG00000013039	xrn2	98	69.466	ENSRBIG00000036193	XRN2	62	69.466	Rhinopithecus_bieti
ENSFHEG00000013039	xrn2	98	69.847	ENSSBOG00000021014	XRN2	54	69.847	Saimiri_boliviensis_boliviensis
ENSFHEG00000013039	xrn2	98	79.502	ENSSFOG00015001091	xrn2	54	79.502	Scleropages_formosus
ENSFHEG00000013039	xrn2	98	82.792	ENSSMAG00000007834	xrn2	53	82.792	Scophthalmus_maximus
ENSFHEG00000013039	xrn2	98	85.934	ENSSDUG00000012802	xrn2	59	85.934	Seriola_dumerili
ENSFHEG00000013039	xrn2	98	86.015	ENSSLDG00000021273	xrn2	59	86.015	Seriola_lalandi_dorsalis
ENSFHEG00000013039	xrn2	98	72.190	ENSSPUG00000005485	XRN2	54	72.190	Sphenodon_punctatus
ENSFHEG00000013039	xrn2	98	84.674	ENSSPAG00000016027	xrn2	53	84.674	Stegastes_partitus
ENSFHEG00000013039	xrn2	98	69.772	ENSSSCG00000007109	XRN2	55	69.772	Sus_scrofa
ENSFHEG00000013039	xrn2	98	69.275	ENSTGUG00000007535	XRN2	54	69.275	Taeniopygia_guttata
ENSFHEG00000013039	xrn2	98	80.843	ENSTRUG00000015489	xrn2	53	80.843	Takifugu_rubripes
ENSFHEG00000013039	xrn2	98	79.008	ENSTNIG00000010712	xrn2	53	79.008	Tetraodon_nigroviridis
ENSFHEG00000013039	xrn2	98	69.466	ENSTBEG00000004119	XRN2	54	69.466	Tupaia_belangeri
ENSFHEG00000013039	xrn2	98	69.084	ENSTTRG00000009087	XRN2	54	69.084	Tursiops_truncatus
ENSFHEG00000013039	xrn2	98	69.847	ENSUAMG00000024634	XRN2	50	75.728	Ursus_americanus
ENSFHEG00000013039	xrn2	75	88.158	ENSUMAG00000004012	XRN2	50	68.876	Ursus_maritimus
ENSFHEG00000013039	xrn2	98	69.847	ENSVVUG00000012178	XRN2	54	69.847	Vulpes_vulpes
ENSFHEG00000013039	xrn2	98	72.137	ENSXETG00000023501	xrn2	54	72.137	Xenopus_tropicalis
ENSFHEG00000013039	xrn2	98	86.015	ENSXMAG00000000242	xrn2	92	85.714	Xiphophorus_maculatus