EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 17841 bases
Position: chrKN811320.1:187992-205832
Accession: 105928143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028929	RRM_1	PF00076.22	2.6e-18	1	1
ENSFHEP00000011879	RRM_1	PF00076.22	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019017	-	2158	XM_021317918	ENSFHEP00000028929	350 (aa)	XP_021173593	-
ENSFHET00000031770	-	1026	-	ENSFHEP00000011879	341 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000013358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013358	-	81	38.961	ENSFHEG00000008474	hnrnph1	81	38.961
ENSFHEG00000013358	-	81	50.725	ENSFHEG00000010727	HNRNPH3	66	59.211
ENSFHEG00000013358	-	58	30.556	ENSFHEG00000014539	zgc:153215	54	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013358	-	99	51.478	ENSAPOG00000012487	grsf1	99	50.739	Acanthochromis_polyacanthus
ENSFHEG00000013358	-	99	50.124	ENSACIG00000005871	grsf1	99	50.124	Amphilophus_citrinellus
ENSFHEG00000013358	-	99	52.580	ENSAOCG00000017462	-	99	52.088	Amphiprion_ocellaris
ENSFHEG00000013358	-	99	52.451	ENSAPEG00000007240	-	99	50.735	Amphiprion_percula
ENSFHEG00000013358	-	99	50.990	ENSATEG00000007185	grsf1	100	50.248	Anabas_testudineus
ENSFHEG00000013358	-	99	50.244	ENSACLG00000003685	-	99	49.756	Astatotilapia_calliptera
ENSFHEG00000013358	-	88	39.319	ENSAMXG00000012270	grsf1	96	39.873	Astyanax_mexicanus
ENSFHEG00000013358	-	100	45.289	ENSCSEG00000019209	-	100	44.377	Cynoglossus_semilaevis
ENSFHEG00000013358	-	99	56.824	ENSCVAG00000004476	grsf1	100	56.079	Cyprinodon_variegatus
ENSFHEG00000013358	-	99	37.650	ENSDARG00000053021	grsf1	96	37.170	Danio_rerio
ENSFHEG00000013358	-	81	66.000	ENSGMOG00000014047	grsf1	79	66.000	Gadus_morhua
ENSFHEG00000013358	-	99	59.901	ENSGAFG00000004496	grsf1	99	59.158	Gambusia_affinis
ENSFHEG00000013358	-	81	47.452	ENSGACG00000014447	grsf1	96	47.452	Gasterosteus_aculeatus
ENSFHEG00000013358	-	99	50.367	ENSHBUG00000006284	grsf1	99	49.878	Haplochromis_burtoni
ENSFHEG00000013358	-	99	43.781	ENSHCOG00000007715	-	99	43.035	Hippocampus_comes
ENSFHEG00000013358	-	86	41.925	ENSIPUG00000010533	grsf1	83	40.979	Ictalurus_punctatus
ENSFHEG00000013358	-	99	49.061	ENSKMAG00000004528	grsf1	100	48.826	Kryptolebias_marmoratus
ENSFHEG00000013358	-	82	46.780	ENSLBEG00000018100	grsf1	94	46.780	Labrus_bergylta
ENSFHEG00000013358	-	98	50.739	ENSMAMG00000002627	grsf1	99	49.754	Mastacembelus_armatus
ENSFHEG00000013358	-	99	50.244	ENSMZEG00005020633	-	99	49.756	Maylandia_zebra
ENSFHEG00000013358	-	94	48.011	ENSMMOG00000014231	grsf1	98	47.558	Mola_mola
ENSFHEG00000013358	-	98	45.652	ENSMALG00000000251	grsf1	100	44.634	Monopterus_albus
ENSFHEG00000013358	-	98	49.383	ENSNBRG00000017774	grsf1	96	48.889	Neolamprologus_brichardi
ENSFHEG00000013358	-	99	50.608	ENSONIG00000014119	grsf1	99	50.122	Oreochromis_niloticus
ENSFHEG00000013358	-	85	50.470	ENSORLG00000030211	grsf1	89	50.143	Oryzias_latipes
ENSFHEG00000013358	-	84	51.009	ENSORLG00020014383	grsf1	89	50.143	Oryzias_latipes_hni
ENSFHEG00000013358	-	85	49.842	ENSORLG00015006520	grsf1	90	49.857	Oryzias_latipes_hsok
ENSFHEG00000013358	-	86	51.562	ENSOMEG00000009181	grsf1	94	50.138	Oryzias_melastigma
ENSFHEG00000013358	-	89	41.141	ENSPKIG00000019432	grsf1	80	43.210	Paramormyrops_kingsleyae
ENSFHEG00000013358	-	88	49.102	ENSPMGG00000013654	grsf1	93	49.102	Periophthalmus_magnuspinnatus
ENSFHEG00000013358	-	99	59.223	ENSPFOG00000006122	grsf1	99	59.223	Poecilia_formosa
ENSFHEG00000013358	-	99	60.049	ENSPLAG00000020977	grsf1	99	59.804	Poecilia_latipinna
ENSFHEG00000013358	-	99	59.223	ENSPMEG00000012485	grsf1	99	58.981	Poecilia_mexicana
ENSFHEG00000013358	-	99	59.367	ENSPREG00000013383	grsf1	99	59.124	Poecilia_reticulata
ENSFHEG00000013358	-	99	50.493	ENSPNYG00000005379	grsf1	99	50.000	Pundamilia_nyererei
ENSFHEG00000013358	-	96	41.071	ENSPNAG00000014912	grsf1	95	40.306	Pygocentrus_nattereri
ENSFHEG00000013358	-	85	45.133	ENSSFOG00015014620	grsf1	88	47.436	Scleropages_formosus
ENSFHEG00000013358	-	99	47.799	ENSSMAG00000014181	grsf1	99	46.855	Scophthalmus_maximus
ENSFHEG00000013358	-	99	47.654	ENSSDUG00000009397	-	97	50.450	Seriola_dumerili
ENSFHEG00000013358	-	99	45.792	ENSSLDG00000025494	grsf1	97	47.839	Seriola_lalandi_dorsalis
ENSFHEG00000013358	-	99	49.510	ENSSPAG00000023296	grsf1	99	48.529	Stegastes_partitus
ENSFHEG00000013358	-	96	46.429	ENSTRUG00000015354	grsf1	100	45.320	Takifugu_rubripes
ENSFHEG00000013358	-	86	46.130	ENSTNIG00000015350	-	99	46.749	Tetraodon_nigroviridis
ENSFHEG00000013358	-	99	59.753	ENSXMAG00000029710	grsf1	100	59.012	Xiphophorus_maculatus