EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013517 (Gene tree)
Gene ID: 105933271
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 15222 bases
Position: chrKN811404.1:1360130-1375351
Accession: 105933271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012034	dsrm	PF00035.26	3.4e-49	1	4
ENSFHEP00000012034	dsrm	PF00035.26	3.4e-49	2	4
ENSFHEP00000012034	dsrm	PF00035.26	3.4e-49	3	4
ENSFHEP00000012034	dsrm	PF00035.26	3.4e-49	4	4
ENSFHEP00000028992	dsrm	PF00035.26	2e-36	1	3
ENSFHEP00000028992	dsrm	PF00035.26	2e-36	2	3
ENSFHEP00000028992	dsrm	PF00035.26	2e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019153	-	1719	-	ENSFHEP00000028992	572 (aa)	-	-
ENSFHET00000019184	-	4480	XM_021321574	ENSFHEP00000012034	695 (aa)	XP_021177249	UPI000644D1B8

Gene Model

Click here to download ENSFHEG00000013517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013517	stau1	64	45.787	ENSFHEG00000018386	stau2	85	51.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013517	stau1	96	73.386	ENSG00000124214	STAU1	99	73.453	Homo_sapiens
ENSFHEG00000013517	stau1	99	89.337	ENSAPOG00000017260	stau1	99	89.337	Acanthochromis_polyacanthus
ENSFHEG00000013517	stau1	99	72.727	ENSAMEG00000013681	STAU1	99	68.563	Ailuropoda_melanoleuca
ENSFHEG00000013517	stau1	100	88.538	ENSACIG00000015918	stau1	99	88.040	Amphilophus_citrinellus
ENSFHEG00000013517	stau1	99	90.346	ENSAOCG00000012224	stau1	99	90.346	Amphiprion_ocellaris
ENSFHEG00000013517	stau1	99	90.346	ENSAPEG00000012308	stau1	99	90.346	Amphiprion_percula
ENSFHEG00000013517	stau1	99	90.490	ENSATEG00000024600	stau1	100	90.555	Anabas_testudineus
ENSFHEG00000013517	stau1	100	70.718	ENSAPLG00000010527	STAU1	100	70.718	Anas_platyrhynchos
ENSFHEG00000013517	stau1	100	71.893	ENSACAG00000015909	STAU1	99	72.034	Anolis_carolinensis
ENSFHEG00000013517	stau1	96	72.340	ENSANAG00000032714	STAU1	99	72.340	Aotus_nancymaae
ENSFHEG00000013517	stau1	99	88.184	ENSACLG00000012270	stau1	99	88.184	Astatotilapia_calliptera
ENSFHEG00000013517	stau1	100	76.348	ENSAMXG00000016812	stau1	98	79.371	Astyanax_mexicanus
ENSFHEG00000013517	stau1	96	72.603	ENSBTAG00000000241	STAU1	99	72.603	Bos_taurus
ENSFHEG00000013517	stau1	98	71.537	ENSCJAG00000016233	STAU1	99	73.190	Callithrix_jacchus
ENSFHEG00000013517	stau1	99	71.512	ENSCAFG00000011347	STAU1	97	72.603	Canis_familiaris
ENSFHEG00000013517	stau1	99	71.512	ENSCAFG00020017123	STAU1	99	72.358	Canis_lupus_dingo
ENSFHEG00000013517	stau1	96	72.211	ENSCHIG00000001799	-	99	72.211	Capra_hircus
ENSFHEG00000013517	stau1	96	72.016	ENSTSYG00000036179	-	99	72.016	Carlito_syrichta
ENSFHEG00000013517	stau1	86	72.121	ENSCAPG00000017041	STAU1	99	71.919	Cavia_aperea
ENSFHEG00000013517	stau1	85	70.101	ENSCPOG00000005566	STAU1	99	70.200	Cavia_porcellus
ENSFHEG00000013517	stau1	96	72.340	ENSCCAG00000034339	STAU1	99	72.340	Cebus_capucinus
ENSFHEG00000013517	stau1	96	74.893	ENSCATG00000028474	STAU1	99	74.893	Cercocebus_atys
ENSFHEG00000013517	stau1	86	59.879	ENSCLAG00000002784	-	99	60.161	Chinchilla_lanigera
ENSFHEG00000013517	stau1	85	73.131	ENSCLAG00000006516	-	99	73.200	Chinchilla_lanigera
ENSFHEG00000013517	stau1	86	73.387	ENSCSAG00000014986	STAU1	99	73.653	Chlorocebus_sabaeus
ENSFHEG00000013517	stau1	96	73.438	ENSCHOG00000001511	STAU1	99	73.438	Choloepus_hoffmanni
ENSFHEG00000013517	stau1	100	71.853	ENSCPBG00000026741	STAU1	100	71.853	Chrysemys_picta_bellii
ENSFHEG00000013517	stau1	96	73.581	ENSCANG00000039220	STAU1	99	73.581	Colobus_angolensis_palliatus
ENSFHEG00000013517	stau1	85	69.355	ENSCGRG00001013453	Stau1	99	69.200	Cricetulus_griseus_chok1gshd
ENSFHEG00000013517	stau1	85	69.355	ENSCGRG00000007216	Stau1	99	69.200	Cricetulus_griseus_crigri
ENSFHEG00000013517	stau1	99	76.164	ENSCSEG00000000792	stau1	99	77.151	Cynoglossus_semilaevis
ENSFHEG00000013517	stau1	100	88.482	ENSCVAG00000005906	stau1	100	88.694	Cyprinodon_variegatus
ENSFHEG00000013517	stau1	100	79.029	ENSDARG00000044182	stau1	100	79.906	Danio_rerio
ENSFHEG00000013517	stau1	96	73.438	ENSDNOG00000014933	STAU1	97	73.242	Dasypus_novemcinctus
ENSFHEG00000013517	stau1	85	72.393	ENSDORG00000030220	Stau1	99	72.065	Dipodomys_ordii
ENSFHEG00000013517	stau1	87	75.415	ENSETEG00000018235	STAU1	86	75.585	Echinops_telfairi
ENSFHEG00000013517	stau1	99	72.656	ENSEASG00005023343	STAU1	99	72.727	Equus_asinus_asinus
ENSFHEG00000013517	stau1	99	73.518	ENSECAG00000012894	STAU1	99	73.581	Equus_caballus
ENSFHEG00000013517	stau1	68	76.590	ENSEEUG00000014344	STAU1	68	77.157	Erinaceus_europaeus
ENSFHEG00000013517	stau1	99	80.878	ENSELUG00000002529	stau1	99	81.931	Esox_lucius
ENSFHEG00000013517	stau1	99	72.904	ENSFCAG00000001447	STAU1	99	73.581	Felis_catus
ENSFHEG00000013517	stau1	100	71.795	ENSFALG00000012940	STAU1	100	71.795	Ficedula_albicollis
ENSFHEG00000013517	stau1	85	72.121	ENSFDAG00000014119	-	99	72.400	Fukomys_damarensis
ENSFHEG00000013517	stau1	85	56.073	ENSFDAG00000020837	-	98	54.970	Fukomys_damarensis
ENSFHEG00000013517	stau1	100	71.888	ENSGMOG00000016850	stau1	100	71.888	Gadus_morhua
ENSFHEG00000013517	stau1	100	72.934	ENSGALG00000004736	STAU1	100	72.934	Gallus_gallus
ENSFHEG00000013517	stau1	100	94.820	ENSGAFG00000010437	stau1	100	94.820	Gambusia_affinis
ENSFHEG00000013517	stau1	99	88.058	ENSGACG00000001352	stau1	99	88.058	Gasterosteus_aculeatus
ENSFHEG00000013517	stau1	100	72.896	ENSGAGG00000009825	STAU1	100	72.896	Gopherus_agassizii
ENSFHEG00000013517	stau1	96	67.885	ENSGGOG00000025351	STAU1	99	76.648	Gorilla_gorilla
ENSFHEG00000013517	stau1	99	88.040	ENSHBUG00000023668	stau1	99	88.040	Haplochromis_burtoni
ENSFHEG00000013517	stau1	85	73.620	ENSHGLG00000008730	STAU1	99	73.684	Heterocephalus_glaber_female
ENSFHEG00000013517	stau1	85	73.620	ENSHGLG00100000098	STAU1	99	73.684	Heterocephalus_glaber_male
ENSFHEG00000013517	stau1	99	82.615	ENSHCOG00000018461	stau1	99	82.615	Hippocampus_comes
ENSFHEG00000013517	stau1	99	74.711	ENSIPUG00000023725	stau1	99	74.711	Ictalurus_punctatus
ENSFHEG00000013517	stau1	85	73.415	ENSSTOG00000003634	STAU1	99	73.482	Ictidomys_tridecemlineatus
ENSFHEG00000013517	stau1	85	72.188	ENSJJAG00000020032	Stau1	99	72.267	Jaculus_jaculus
ENSFHEG00000013517	stau1	99	87.205	ENSKMAG00000007135	stau1	99	86.227	Kryptolebias_marmoratus
ENSFHEG00000013517	stau1	100	87.338	ENSLBEG00000020172	stau1	99	87.464	Labrus_bergylta
ENSFHEG00000013517	stau1	99	76.517	ENSLACG00000016157	STAU1	97	73.391	Latimeria_chalumnae
ENSFHEG00000013517	stau1	99	77.909	ENSLOCG00000003134	stau1	100	77.155	Lepisosteus_oculatus
ENSFHEG00000013517	stau1	88	73.123	ENSLAFG00000003238	STAU1	99	72.994	Loxodonta_africana
ENSFHEG00000013517	stau1	96	74.893	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSFHEG00000013517	stau1	96	67.885	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSFHEG00000013517	stau1	96	73.941	ENSMNEG00000033821	STAU1	99	73.941	Macaca_nemestrina
ENSFHEG00000013517	stau1	96	73.386	ENSMLEG00000031383	STAU1	99	73.386	Mandrillus_leucophaeus
ENSFHEG00000013517	stau1	99	89.769	ENSMAMG00000017586	stau1	100	90.105	Mastacembelus_armatus
ENSFHEG00000013517	stau1	99	88.184	ENSMZEG00005015605	stau1	99	88.184	Maylandia_zebra
ENSFHEG00000013517	stau1	100	70.856	ENSMGAG00000004719	STAU1	100	70.856	Meleagris_gallopavo
ENSFHEG00000013517	stau1	85	69.355	ENSMAUG00000013846	Stau1	99	69.000	Mesocricetus_auratus
ENSFHEG00000013517	stau1	96	71.373	ENSMICG00000001995	STAU1	99	71.373	Microcebus_murinus
ENSFHEG00000013517	stau1	85	70.637	ENSMOCG00000018743	Stau1	99	69.800	Microtus_ochrogaster
ENSFHEG00000013517	stau1	100	84.835	ENSMMOG00000015455	stau1	99	86.061	Mola_mola
ENSFHEG00000013517	stau1	99	74.067	ENSMODG00000016276	STAU1	99	73.425	Monodelphis_domestica
ENSFHEG00000013517	stau1	99	90.058	ENSMALG00000000045	stau1	99	90.058	Monopterus_albus
ENSFHEG00000013517	stau1	85	70.757	MGP_CAROLIEiJ_G0024699	Stau1	100	69.939	Mus_caroli
ENSFHEG00000013517	stau1	85	70.408	ENSMUSG00000039536	Stau1	100	70.468	Mus_musculus
ENSFHEG00000013517	stau1	85	70.143	MGP_PahariEiJ_G0026141	Stau1	99	69.838	Mus_pahari
ENSFHEG00000013517	stau1	85	70.408	MGP_SPRETEiJ_G0025619	Stau1	100	70.468	Mus_spretus
ENSFHEG00000013517	stau1	99	72.530	ENSMPUG00000017581	STAU1	99	70.431	Mustela_putorius_furo
ENSFHEG00000013517	stau1	96	71.984	ENSMLUG00000008407	STAU1	97	71.984	Myotis_lucifugus
ENSFHEG00000013517	stau1	85	71.313	ENSNGAG00000007108	Stau1	99	71.000	Nannospalax_galili
ENSFHEG00000013517	stau1	99	88.040	ENSNBRG00000017596	stau1	99	88.040	Neolamprologus_brichardi
ENSFHEG00000013517	stau1	96	73.386	ENSNLEG00000006955	STAU1	99	73.386	Nomascus_leucogenys
ENSFHEG00000013517	stau1	80	76.573	ENSMEUG00000003263	STAU1	80	76.623	Notamacropus_eugenii
ENSFHEG00000013517	stau1	94	69.131	ENSOPRG00000014569	STAU1	94	68.519	Ochotona_princeps
ENSFHEG00000013517	stau1	86	72.984	ENSODEG00000006523	STAU1	99	72.854	Octodon_degus
ENSFHEG00000013517	stau1	100	85.575	ENSONIG00000004152	stau1	98	85.434	Oreochromis_niloticus
ENSFHEG00000013517	stau1	100	70.804	ENSOANG00000006394	STAU1	100	70.804	Ornithorhynchus_anatinus
ENSFHEG00000013517	stau1	96	72.798	ENSOCUG00000006214	STAU1	99	72.798	Oryctolagus_cuniculus
ENSFHEG00000013517	stau1	100	84.914	ENSOMEG00000002388	stau1	100	84.914	Oryzias_melastigma
ENSFHEG00000013517	stau1	85	51.521	ENSOGAG00000028222	-	99	50.800	Otolemur_garnettii
ENSFHEG00000013517	stau1	96	72.798	ENSOGAG00000002127	STAU1	97	72.798	Otolemur_garnettii
ENSFHEG00000013517	stau1	99	72.134	ENSOARG00000012204	STAU1	97	72.211	Ovis_aries
ENSFHEG00000013517	stau1	96	67.885	ENSPPAG00000032023	STAU1	99	76.648	Pan_paniscus
ENSFHEG00000013517	stau1	96	73.581	ENSPPRG00000003436	STAU1	99	73.653	Panthera_pardus
ENSFHEG00000013517	stau1	96	73.581	ENSPTIG00000011768	STAU1	99	73.581	Panthera_tigris_altaica
ENSFHEG00000013517	stau1	96	67.885	ENSPTRG00000023130	STAU1	99	76.648	Pan_troglodytes
ENSFHEG00000013517	stau1	96	74.893	ENSPANG00000020560	STAU1	99	74.893	Papio_anubis
ENSFHEG00000013517	stau1	100	78.740	ENSPKIG00000024588	stau1	99	78.429	Paramormyrops_kingsleyae
ENSFHEG00000013517	stau1	100	72.753	ENSPSIG00000010731	STAU1	99	72.753	Pelodiscus_sinensis
ENSFHEG00000013517	stau1	100	84.384	ENSPMGG00000018553	stau1	100	84.384	Periophthalmus_magnuspinnatus
ENSFHEG00000013517	stau1	85	69.758	ENSPEMG00000022045	Stau1	99	69.600	Peromyscus_maniculatus_bairdii
ENSFHEG00000013517	stau1	99	73.529	ENSPCIG00000023269	STAU1	99	71.970	Phascolarctos_cinereus
ENSFHEG00000013517	stau1	100	93.391	ENSPFOG00000017253	stau1	100	93.391	Poecilia_formosa
ENSFHEG00000013517	stau1	58	90.050	ENSPLAG00000014829	stau1	97	86.923	Poecilia_latipinna
ENSFHEG00000013517	stau1	100	89.655	ENSPMEG00000007495	stau1	100	89.655	Poecilia_mexicana
ENSFHEG00000013517	stau1	100	93.678	ENSPREG00000003477	stau1	100	93.678	Poecilia_reticulata
ENSFHEG00000013517	stau1	96	73.242	ENSPPYG00000011111	STAU1	99	73.242	Pongo_abelii
ENSFHEG00000013517	stau1	95	62.545	ENSPCAG00000002459	STAU1	100	66.388	Procavia_capensis
ENSFHEG00000013517	stau1	96	72.407	ENSPCOG00000027746	STAU1	99	72.407	Propithecus_coquereli
ENSFHEG00000013517	stau1	86	76.080	ENSPVAG00000015019	STAU1	86	77.152	Pteropus_vampyrus
ENSFHEG00000013517	stau1	99	88.040	ENSPNYG00000014436	stau1	99	88.040	Pundamilia_nyererei
ENSFHEG00000013517	stau1	100	76.402	ENSPNAG00000011323	stau1	99	77.110	Pygocentrus_nattereri
ENSFHEG00000013517	stau1	85	69.556	ENSRNOG00000007781	Stau1	99	69.400	Rattus_norvegicus
ENSFHEG00000013517	stau1	86	72.946	ENSRBIG00000037345	STAU1	100	73.108	Rhinopithecus_bieti
ENSFHEG00000013517	stau1	96	73.941	ENSRROG00000039008	STAU1	99	73.941	Rhinopithecus_roxellana
ENSFHEG00000013517	stau1	96	72.340	ENSSBOG00000034448	STAU1	99	72.340	Saimiri_boliviensis_boliviensis
ENSFHEG00000013517	stau1	99	74.067	ENSSHAG00000009492	STAU1	99	71.746	Sarcophilus_harrisii
ENSFHEG00000013517	stau1	100	80.512	ENSSFOG00015021497	stau1	99	79.741	Scleropages_formosus
ENSFHEG00000013517	stau1	99	89.769	ENSSMAG00000017410	stau1	99	89.769	Scophthalmus_maximus
ENSFHEG00000013517	stau1	99	90.346	ENSSDUG00000019439	stau1	99	90.346	Seriola_dumerili
ENSFHEG00000013517	stau1	99	90.346	ENSSLDG00000025040	stau1	99	90.346	Seriola_lalandi_dorsalis
ENSFHEG00000013517	stau1	63	73.913	ENSSARG00000010389	-	62	74.104	Sorex_araneus
ENSFHEG00000013517	stau1	100	72.175	ENSSPUG00000017983	STAU1	99	72.312	Sphenodon_punctatus
ENSFHEG00000013517	stau1	99	90.202	ENSSPAG00000019275	stau1	99	90.202	Stegastes_partitus
ENSFHEG00000013517	stau1	99	71.899	ENSSSCG00000027444	STAU1	99	73.884	Sus_scrofa
ENSFHEG00000013517	stau1	100	69.697	ENSTGUG00000008784	STAU1	100	69.697	Taeniopygia_guttata
ENSFHEG00000013517	stau1	100	85.106	ENSTRUG00000005837	stau1	99	85.447	Takifugu_rubripes
ENSFHEG00000013517	stau1	97	84.398	ENSTNIG00000014732	stau1	99	84.398	Tetraodon_nigroviridis
ENSFHEG00000013517	stau1	96	62.305	ENSTBEG00000009404	STAU1	99	62.305	Tupaia_belangeri
ENSFHEG00000013517	stau1	80	72.017	ENSTTRG00000004285	STAU1	80	72.511	Tursiops_truncatus
ENSFHEG00000013517	stau1	86	71.769	ENSUAMG00000025449	STAU1	99	71.850	Ursus_americanus
ENSFHEG00000013517	stau1	66	68.146	ENSUMAG00000024475	STAU1	89	68.750	Ursus_maritimus
ENSFHEG00000013517	stau1	96	73.190	ENSVPAG00000001313	STAU1	99	73.190	Vicugna_pacos
ENSFHEG00000013517	stau1	99	71.705	ENSVVUG00000022325	STAU1	99	69.287	Vulpes_vulpes
ENSFHEG00000013517	stau1	97	71.450	ENSXETG00000001783	stau1	96	71.154	Xenopus_tropicalis
ENSFHEG00000013517	stau1	54	90.642	ENSXCOG00000008804	stau1	94	89.305	Xiphophorus_couchianus
ENSFHEG00000013517	stau1	100	94.245	ENSXMAG00000016175	stau1	100	94.245	Xiphophorus_maculatus