EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000013721 (Gene tree)
Gene ID: 105924052
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 26416 bases
Position: chrKN805554.1:682983-709398
Accession: 105924052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012115	Rif1_N	PF12231.8	1e-81	1	1
ENSFHEP00000012066	Rif1_N	PF12231.8	6.6e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019272	-	6963	XM_012859953	ENSFHEP00000012115	2320 (aa)	XP_012715407	-
ENSFHET00000019219	-	6822	-	ENSFHEP00000012066	2273 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000013721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013721	rif1	65	49.960	ENSG00000080345	RIF1	96	53.920	Homo_sapiens
ENSFHEG00000013721	rif1	99	54.242	ENSAPOG00000011073	rif1	96	65.428	Acanthochromis_polyacanthus
ENSFHEG00000013721	rif1	97	68.973	ENSACIG00000017765	rif1	100	68.182	Amphilophus_citrinellus
ENSFHEG00000013721	rif1	99	55.410	ENSAOCG00000017231	rif1	97	65.549	Amphiprion_ocellaris
ENSFHEG00000013721	rif1	97	74.265	ENSAPEG00000013228	rif1	100	74.265	Amphiprion_percula
ENSFHEG00000013721	rif1	99	61.011	ENSATEG00000022887	rif1	99	60.912	Anabas_testudineus
ENSFHEG00000013721	rif1	60	53.953	ENSAPLG00000007092	RIF1	66	51.197	Anas_platyrhynchos
ENSFHEG00000013721	rif1	68	48.228	ENSACAG00000003714	RIF1	66	48.914	Anolis_carolinensis
ENSFHEG00000013721	rif1	65	50.277	ENSANAG00000024840	RIF1	62	50.319	Aotus_nancymaae
ENSFHEG00000013721	rif1	78	60.857	ENSAMXG00000010910	rif1	76	60.857	Astyanax_mexicanus
ENSFHEG00000013721	rif1	58	55.172	ENSBTAG00000021020	RIF1	59	55.172	Bos_taurus
ENSFHEG00000013721	rif1	65	50.278	ENSCJAG00000003138	RIF1	62	50.400	Callithrix_jacchus
ENSFHEG00000013721	rif1	66	50.080	ENSCAFG00000005670	RIF1	60	50.283	Canis_familiaris
ENSFHEG00000013721	rif1	66	50.080	ENSCAFG00020016401	RIF1	64	50.283	Canis_lupus_dingo
ENSFHEG00000013721	rif1	65	48.246	ENSCHIG00000020327	RIF1	63	49.483	Capra_hircus
ENSFHEG00000013721	rif1	66	47.389	ENSTSYG00000008861	RIF1	61	48.097	Carlito_syrichta
ENSFHEG00000013721	rif1	52	41.483	ENSCAPG00000008957	RIF1	62	38.966	Cavia_aperea
ENSFHEG00000013721	rif1	65	47.815	ENSCPOG00000037898	RIF1	63	48.230	Cavia_porcellus
ENSFHEG00000013721	rif1	65	48.298	ENSCCAG00000024760	RIF1	62	48.323	Cebus_capucinus
ENSFHEG00000013721	rif1	64	49.358	ENSCLAG00000001517	RIF1	62	50.523	Chinchilla_lanigera
ENSFHEG00000013721	rif1	62	49.778	ENSCHOG00000007187	RIF1	59	49.778	Choloepus_hoffmanni
ENSFHEG00000013721	rif1	78	44.832	ENSCPBG00000025885	RIF1	85	44.626	Chrysemys_picta_bellii
ENSFHEG00000013721	rif1	65	49.241	ENSCANG00000028962	RIF1	62	49.355	Colobus_angolensis_palliatus
ENSFHEG00000013721	rif1	65	47.494	ENSCGRG00001024589	Rif1	64	48.169	Cricetulus_griseus_chok1gshd
ENSFHEG00000013721	rif1	96	54.880	ENSCSEG00000003945	rif1	98	53.144	Cynoglossus_semilaevis
ENSFHEG00000013721	rif1	99	66.502	ENSCVAG00000022479	rif1	100	66.502	Cyprinodon_variegatus
ENSFHEG00000013721	rif1	80	57.650	ENSDARG00000062650	rif1	72	59.155	Danio_rerio
ENSFHEG00000013721	rif1	69	48.490	ENSDNOG00000011194	RIF1	62	48.950	Dasypus_novemcinctus
ENSFHEG00000013721	rif1	56	54.425	ENSETEG00000012421	RIF1	59	54.425	Echinops_telfairi
ENSFHEG00000013721	rif1	61	66.124	ENSEASG00005023434	RIF1	58	66.124	Equus_asinus_asinus
ENSFHEG00000013721	rif1	63	57.602	ENSECAG00000012679	RIF1	61	58.912	Equus_caballus
ENSFHEG00000013721	rif1	70	62.481	ENSELUG00000006826	rif1	67	60.054	Esox_lucius
ENSFHEG00000013721	rif1	66	49.407	ENSFCAG00000029742	RIF1	62	50.203	Felis_catus
ENSFHEG00000013721	rif1	58	51.562	ENSFALG00000013874	RIF1	64	52.571	Ficedula_albicollis
ENSFHEG00000013721	rif1	65	49.675	ENSFDAG00000006538	RIF1	63	50.041	Fukomys_damarensis
ENSFHEG00000013721	rif1	69	73.043	ENSGMOG00000003517	rif1	100	73.043	Gadus_morhua
ENSFHEG00000013721	rif1	97	82.185	ENSGAFG00000017196	rif1	99	82.185	Gambusia_affinis
ENSFHEG00000013721	rif1	94	55.829	ENSGACG00000008579	rif1	84	57.492	Gasterosteus_aculeatus
ENSFHEG00000013721	rif1	80	43.742	ENSGAGG00000012595	RIF1	84	46.027	Gopherus_agassizii
ENSFHEG00000013721	rif1	54	58.601	ENSGGOG00000040178	RIF1	55	58.601	Gorilla_gorilla
ENSFHEG00000013721	rif1	99	62.664	ENSHBUG00000007125	rif1	100	62.556	Haplochromis_burtoni
ENSFHEG00000013721	rif1	60	48.580	ENSHGLG00100009807	RIF1	61	50.041	Heterocephalus_glaber_male
ENSFHEG00000013721	rif1	99	61.769	ENSHCOG00000015943	rif1	91	61.825	Hippocampus_comes
ENSFHEG00000013721	rif1	85	56.321	ENSIPUG00000021703	rif1	76	56.234	Ictalurus_punctatus
ENSFHEG00000013721	rif1	66	50.721	ENSSTOG00000020712	RIF1	62	50.768	Ictidomys_tridecemlineatus
ENSFHEG00000013721	rif1	65	48.148	ENSJJAG00000023000	Rif1	64	48.335	Jaculus_jaculus
ENSFHEG00000013721	rif1	99	60.989	ENSKMAG00000002852	rif1	99	61.257	Kryptolebias_marmoratus
ENSFHEG00000013721	rif1	99	70.596	ENSLBEG00000023196	rif1	97	64.437	Labrus_bergylta
ENSFHEG00000013721	rif1	51	54.000	ENSLACG00000005425	RIF1	52	54.170	Latimeria_chalumnae
ENSFHEG00000013721	rif1	77	55.775	ENSLOCG00000002657	rif1	83	56.056	Lepisosteus_oculatus
ENSFHEG00000013721	rif1	66	49.147	ENSLAFG00000009796	RIF1	63	50.040	Loxodonta_africana
ENSFHEG00000013721	rif1	68	50.081	ENSMFAG00000032233	RIF1	65	50.122	Macaca_fascicularis
ENSFHEG00000013721	rif1	68	50.081	ENSMMUG00000008611	RIF1	65	50.122	Macaca_mulatta
ENSFHEG00000013721	rif1	68	50.000	ENSMLEG00000042945	RIF1	65	50.041	Mandrillus_leucophaeus
ENSFHEG00000013721	rif1	72	70.228	ENSMAMG00000001745	rif1	59	70.228	Mastacembelus_armatus
ENSFHEG00000013721	rif1	99	69.401	ENSMZEG00005020920	rif1	99	73.517	Maylandia_zebra
ENSFHEG00000013721	rif1	50	51.345	ENSMGAG00000012732	RIF1	53	51.599	Meleagris_gallopavo
ENSFHEG00000013721	rif1	61	53.455	ENSMICG00000046127	RIF1	62	49.559	Microcebus_murinus
ENSFHEG00000013721	rif1	99	54.727	ENSMMOG00000006519	rif1	99	54.768	Mola_mola
ENSFHEG00000013721	rif1	53	49.921	ENSMODG00000003703	RIF1	51	50.607	Monodelphis_domestica
ENSFHEG00000013721	rif1	95	62.819	ENSMALG00000016759	rif1	85	66.102	Monopterus_albus
ENSFHEG00000013721	rif1	61	52.441	MGP_CAROLIEiJ_G0023555	Rif1	63	49.390	Mus_caroli
ENSFHEG00000013721	rif1	65	49.479	ENSMUSG00000036202	Rif1	63	49.757	Mus_musculus
ENSFHEG00000013721	rif1	64	47.339	MGP_PahariEiJ_G0025006	Rif1	62	47.844	Mus_pahari
ENSFHEG00000013721	rif1	61	52.712	MGP_SPRETEiJ_G0024476	Rif1	63	50.325	Mus_spretus
ENSFHEG00000013721	rif1	66	49.679	ENSMPUG00000000371	RIF1	62	49.959	Mustela_putorius_furo
ENSFHEG00000013721	rif1	55	47.124	ENSMLUG00000003376	RIF1	59	48.004	Myotis_lucifugus
ENSFHEG00000013721	rif1	99	65.605	ENSNBRG00000014257	rif1	100	59.958	Neolamprologus_brichardi
ENSFHEG00000013721	rif1	65	49.606	ENSNLEG00000010955	RIF1	62	49.562	Nomascus_leucogenys
ENSFHEG00000013721	rif1	66	46.369	ENSODEG00000003950	RIF1	63	47.360	Octodon_degus
ENSFHEG00000013721	rif1	99	62.242	ENSONIG00000013657	rif1	100	62.856	Oreochromis_niloticus
ENSFHEG00000013721	rif1	57	54.649	ENSOANG00000006078	-	55	54.649	Ornithorhynchus_anatinus
ENSFHEG00000013721	rif1	75	49.052	ENSOCUG00000017435	RIF1	62	49.959	Oryctolagus_cuniculus
ENSFHEG00000013721	rif1	99	56.509	ENSORLG00020001302	rif1	99	56.342	Oryzias_latipes_hni
ENSFHEG00000013721	rif1	99	56.284	ENSORLG00015000009	rif1	99	56.185	Oryzias_latipes_hsok
ENSFHEG00000013721	rif1	99	55.546	ENSOMEG00000021513	rif1	99	55.722	Oryzias_melastigma
ENSFHEG00000013721	rif1	65	50.242	ENSOGAG00000006141	RIF1	62	50.285	Otolemur_garnettii
ENSFHEG00000013721	rif1	65	49.881	ENSPPAG00000023754	RIF1	62	50.000	Pan_paniscus
ENSFHEG00000013721	rif1	66	49.329	ENSPPRG00000003618	RIF1	62	50.243	Panthera_pardus
ENSFHEG00000013721	rif1	66	49.329	ENSPTIG00000020652	RIF1	62	50.243	Panthera_tigris_altaica
ENSFHEG00000013721	rif1	65	49.960	ENSPTRG00000012534	RIF1	62	50.081	Pan_troglodytes
ENSFHEG00000013721	rif1	68	50.322	ENSPANG00000008525	RIF1	65	50.325	Papio_anubis
ENSFHEG00000013721	rif1	74	60.340	ENSPKIG00000004267	rif1	63	53.338	Paramormyrops_kingsleyae
ENSFHEG00000013721	rif1	93	60.510	ENSPMGG00000016141	rif1	94	64.870	Periophthalmus_magnuspinnatus
ENSFHEG00000013721	rif1	65	49.517	ENSPEMG00000000446	Rif1	63	50.621	Peromyscus_maniculatus_bairdii
ENSFHEG00000013721	rif1	66	50.321	ENSPCIG00000009185	RIF1	65	51.062	Phascolarctos_cinereus
ENSFHEG00000013721	rif1	99	73.342	ENSPFOG00000017804	rif1	99	73.258	Poecilia_formosa
ENSFHEG00000013721	rif1	93	71.156	ENSPFOG00000000554	-	100	71.201	Poecilia_formosa
ENSFHEG00000013721	rif1	99	72.092	ENSPLAG00000017945	rif1	99	72.007	Poecilia_latipinna
ENSFHEG00000013721	rif1	89	71.764	ENSPMEG00000006897	-	99	71.670	Poecilia_mexicana
ENSFHEG00000013721	rif1	99	76.141	ENSPREG00000018052	rif1	99	77.795	Poecilia_reticulata
ENSFHEG00000013721	rif1	65	50.238	ENSPPYG00000012846	RIF1	62	50.200	Pongo_abelii
ENSFHEG00000013721	rif1	65	50.040	ENSPCOG00000027888	RIF1	62	50.163	Propithecus_coquereli
ENSFHEG00000013721	rif1	56	60.081	ENSPVAG00000014276	RIF1	56	60.081	Pteropus_vampyrus
ENSFHEG00000013721	rif1	99	60.051	ENSPNYG00000012940	rif1	99	68.824	Pundamilia_nyererei
ENSFHEG00000013721	rif1	72	50.555	ENSPNAG00000016685	rif1	70	52.375	Pygocentrus_nattereri
ENSFHEG00000013721	rif1	50	48.178	ENSRNOG00000054901	Rif1	63	48.424	Rattus_norvegicus
ENSFHEG00000013721	rif1	65	50.161	ENSRROG00000028206	RIF1	62	50.401	Rhinopithecus_roxellana
ENSFHEG00000013721	rif1	62	51.512	ENSSBOG00000029530	RIF1	61	51.574	Saimiri_boliviensis_boliviensis
ENSFHEG00000013721	rif1	65	50.244	ENSSHAG00000018552	RIF1	64	50.287	Sarcophilus_harrisii
ENSFHEG00000013721	rif1	78	59.104	ENSSFOG00015021539	rif1	93	59.104	Scleropages_formosus
ENSFHEG00000013721	rif1	98	68.392	ENSSMAG00000011704	rif1	94	68.392	Scophthalmus_maximus
ENSFHEG00000013721	rif1	94	73.176	ENSSDUG00000015632	rif1	99	63.531	Seriola_dumerili
ENSFHEG00000013721	rif1	99	62.083	ENSSLDG00000019531	rif1	99	62.228	Seriola_lalandi_dorsalis
ENSFHEG00000013721	rif1	51	50.932	ENSSPUG00000003062	RIF1	51	52.509	Sphenodon_punctatus
ENSFHEG00000013721	rif1	64	75.453	ENSSPAG00000018359	rif1	94	75.453	Stegastes_partitus
ENSFHEG00000013721	rif1	67	49.292	ENSSSCG00000016395	RIF1	63	50.202	Sus_scrofa
ENSFHEG00000013721	rif1	90	64.449	ENSTRUG00000015808	rif1	99	55.748	Takifugu_rubripes
ENSFHEG00000013721	rif1	90	62.872	ENSTNIG00000011538	rif1	99	54.269	Tetraodon_nigroviridis
ENSFHEG00000013721	rif1	59	53.971	ENSTBEG00000016082	RIF1	56	53.971	Tupaia_belangeri
ENSFHEG00000013721	rif1	66	50.040	ENSTTRG00000011190	RIF1	62	50.488	Tursiops_truncatus
ENSFHEG00000013721	rif1	66	44.781	ENSUAMG00000026385	RIF1	58	48.384	Ursus_americanus
ENSFHEG00000013721	rif1	78	47.334	ENSUMAG00000000337	RIF1	62	50.244	Ursus_maritimus
ENSFHEG00000013721	rif1	65	49.070	ENSVPAG00000002162	RIF1	62	49.103	Vicugna_pacos
ENSFHEG00000013721	rif1	66	50.000	ENSVVUG00000011293	RIF1	63	50.162	Vulpes_vulpes
ENSFHEG00000013721	rif1	78	40.359	ENSXETG00000004530	rif1	67	46.640	Xenopus_tropicalis
ENSFHEG00000013721	rif1	99	69.530	ENSXMAG00000000506	rif1	99	71.294	Xiphophorus_maculatus