EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 2687 bases
Position: chrKN805873.1:80670-83356
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012416	RNA_pol_A_bac	PF01000.26	6e-13	1	1
ENSFHEP00000012416	RNA_pol_L	PF01193.24	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019680	-	618	-	ENSFHEP00000012416	205 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000013867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013867	-	84	95.349	ENSFHEG00000000262	polr1c	56	95.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013867	-	87	70.950	ENSG00000171453	POLR1C	89	80.000	Homo_sapiens
ENSFHEG00000013867	-	86	84.659	ENSAPOG00000024356	polr1c	50	84.659	Acanthochromis_polyacanthus
ENSFHEG00000013867	-	88	70.556	ENSAMEG00000012205	POLR1C	50	70.556	Ailuropoda_melanoleuca
ENSFHEG00000013867	-	84	88.953	ENSATEG00000005985	polr1c	50	86.628	Anabas_testudineus
ENSFHEG00000013867	-	89	70.879	ENSANAG00000025805	POLR1C	59	71.508	Aotus_nancymaae
ENSFHEG00000013867	-	84	88.372	ENSACLG00000006573	polr1c	57	85.465	Astatotilapia_calliptera
ENSFHEG00000013867	-	84	77.326	ENSAMXG00000012062	polr1c	57	77.326	Astyanax_mexicanus
ENSFHEG00000013867	-	87	69.832	ENSBTAG00000018969	POLR1C	50	69.832	Bos_taurus
ENSFHEG00000013867	-	87	70.391	ENSCJAG00000005594	POLR1C	59	70.391	Callithrix_jacchus
ENSFHEG00000013867	-	87	70.391	ENSCHIG00000004352	POLR1C	50	69.832	Capra_hircus
ENSFHEG00000013867	-	89	70.879	ENSTSYG00000011921	POLR1C	59	70.950	Carlito_syrichta
ENSFHEG00000013867	-	93	67.895	ENSCPOG00000038098	POLR1C	53	67.895	Cavia_porcellus
ENSFHEG00000013867	-	90	68.649	ENSCCAG00000020169	POLR1C	59	70.950	Cebus_capucinus
ENSFHEG00000013867	-	89	69.780	ENSCATG00000044045	POLR1C	59	69.832	Cercocebus_atys
ENSFHEG00000013867	-	93	67.895	ENSCLAG00000009266	POLR1C	53	67.895	Chinchilla_lanigera
ENSFHEG00000013867	-	87	69.274	ENSCSAG00000011913	POLR1C	50	69.274	Chlorocebus_sabaeus
ENSFHEG00000013867	-	89	70.330	ENSCANG00000043167	POLR1C	59	70.391	Colobus_angolensis_palliatus
ENSFHEG00000013867	-	93	66.842	ENSCGRG00001017533	Polr1c	53	66.842	Cricetulus_griseus_chok1gshd
ENSFHEG00000013867	-	94	75.130	ENSCSEG00000018097	polr1c	54	75.130	Cynoglossus_semilaevis
ENSFHEG00000013867	-	64	79.412	ENSCVAG00000009585	polr1c	87	81.818	Cyprinodon_variegatus
ENSFHEG00000013867	-	90	75.401	ENSDARG00000039400	polr1c	93	74.866	Danio_rerio
ENSFHEG00000013867	-	87	68.715	ENSDNOG00000042693	POLR1C	50	68.715	Dasypus_novemcinctus
ENSFHEG00000013867	-	93	66.842	ENSDORG00000000429	Polr1c	53	66.842	Dipodomys_ordii
ENSFHEG00000013867	-	87	67.978	ENSETEG00000010807	POLR1C	50	67.978	Echinops_telfairi
ENSFHEG00000013867	-	84	72.093	ENSECAG00000023516	POLR1C	56	71.930	Equus_caballus
ENSFHEG00000013867	-	92	67.553	ENSEEUG00000005471	POLR1C	53	67.553	Erinaceus_europaeus
ENSFHEG00000013867	-	93	71.728	ENSELUG00000013027	polr1c	63	71.728	Esox_lucius
ENSFHEG00000013867	-	87	70.391	ENSFCAG00000009735	POLR1C	59	70.391	Felis_catus
ENSFHEG00000013867	-	93	68.421	ENSFDAG00000008428	POLR1C	53	68.421	Fukomys_damarensis
ENSFHEG00000013867	-	84	83.140	ENSGACG00000002453	polr1c	50	81.818	Gasterosteus_aculeatus
ENSFHEG00000013867	-	89	70.879	ENSGGOG00000010903	POLR1C	59	70.950	Gorilla_gorilla
ENSFHEG00000013867	-	93	67.368	ENSHGLG00000019441	POLR1C	53	67.368	Heterocephalus_glaber_female
ENSFHEG00000013867	-	93	67.895	ENSHGLG00100005970	POLR1C	53	67.895	Heterocephalus_glaber_male
ENSFHEG00000013867	-	87	74.302	ENSHCOG00000002179	polr1c	51	74.302	Hippocampus_comes
ENSFHEG00000013867	-	93	67.895	ENSSTOG00000010631	POLR1C	53	67.895	Ictidomys_tridecemlineatus
ENSFHEG00000013867	-	93	67.895	ENSJJAG00000023110	Polr1c	53	67.895	Jaculus_jaculus
ENSFHEG00000013867	-	85	92.571	ENSKMAG00000014305	polr1c	58	89.205	Kryptolebias_marmoratus
ENSFHEG00000013867	-	89	69.780	ENSMFAG00000046295	POLR1C	59	69.832	Macaca_fascicularis
ENSFHEG00000013867	-	87	69.832	ENSMMUG00000015192	POLR1C	59	69.832	Macaca_mulatta
ENSFHEG00000013867	-	89	69.780	ENSMNEG00000028073	POLR1C	59	69.832	Macaca_nemestrina
ENSFHEG00000013867	-	89	69.231	ENSMLEG00000034818	POLR1C	59	69.274	Mandrillus_leucophaeus
ENSFHEG00000013867	-	84	87.791	ENSMAMG00000008700	polr1c	57	86.047	Mastacembelus_armatus
ENSFHEG00000013867	-	84	87.791	ENSMZEG00005018545	polr1c	57	84.884	Maylandia_zebra
ENSFHEG00000013867	-	93	66.842	ENSMAUG00000014329	Polr1c	50	69.832	Mesocricetus_auratus
ENSFHEG00000013867	-	88	71.111	ENSMICG00000005027	POLR1C	59	70.950	Microcebus_murinus
ENSFHEG00000013867	-	93	67.368	ENSMOCG00000017549	Polr1c	53	67.368	Microtus_ochrogaster
ENSFHEG00000013867	-	84	77.907	ENSMMOG00000005380	polr1c	56	77.907	Mola_mola
ENSFHEG00000013867	-	86	85.227	ENSMALG00000011711	polr1c	58	85.227	Monopterus_albus
ENSFHEG00000013867	-	93	51.053	MGP_CAROLIEiJ_G0021662	Polr1c	88	51.053	Mus_caroli
ENSFHEG00000013867	-	93	66.316	ENSMUSG00000067148	Polr1c	99	74.757	Mus_musculus
ENSFHEG00000013867	-	93	67.368	MGP_PahariEiJ_G0020654	Polr1c	99	75.728	Mus_pahari
ENSFHEG00000013867	-	93	66.316	MGP_SPRETEiJ_G0022574	Polr1c	99	74.757	Mus_spretus
ENSFHEG00000013867	-	88	70.556	ENSMLUG00000017751	POLR1C	50	70.556	Myotis_lucifugus
ENSFHEG00000013867	-	84	87.209	ENSNBRG00000018742	polr1c	56	84.884	Neolamprologus_brichardi
ENSFHEG00000013867	-	87	70.391	ENSNLEG00000004035	POLR1C	51	70.391	Nomascus_leucogenys
ENSFHEG00000013867	-	87	69.832	ENSOPRG00000000145	POLR1C	65	69.832	Ochotona_princeps
ENSFHEG00000013867	-	93	67.368	ENSODEG00000015831	-	53	67.368	Octodon_degus
ENSFHEG00000013867	-	88	70.556	ENSOCUG00000005504	POLR1C	50	70.556	Oryctolagus_cuniculus
ENSFHEG00000013867	-	88	83.333	ENSOMEG00000016527	polr1c	92	83.333	Oryzias_melastigma
ENSFHEG00000013867	-	87	69.832	ENSOARG00000007503	POLR1C	50	69.832	Ovis_aries
ENSFHEG00000013867	-	89	70.879	ENSPPAG00000043678	POLR1C	59	70.950	Pan_paniscus
ENSFHEG00000013867	-	87	70.950	ENSPPRG00000009760	POLR1C	59	70.950	Panthera_pardus
ENSFHEG00000013867	-	87	70.950	ENSPTIG00000014813	POLR1C	59	70.950	Panthera_tigris_altaica
ENSFHEG00000013867	-	89	70.879	ENSPTRG00000018202	POLR1C	59	70.950	Pan_troglodytes
ENSFHEG00000013867	-	89	69.780	ENSPANG00000009025	POLR1C	59	69.832	Papio_anubis
ENSFHEG00000013867	-	86	73.295	ENSPKIG00000009858	polr1c	58	73.295	Paramormyrops_kingsleyae
ENSFHEG00000013867	-	86	81.818	ENSPMGG00000012121	polr1c	58	81.250	Periophthalmus_magnuspinnatus
ENSFHEG00000013867	-	93	66.842	ENSPEMG00000006970	Polr1c	53	66.842	Peromyscus_maniculatus_bairdii
ENSFHEG00000013867	-	84	74.566	ENSPCIG00000028137	POLR1C	56	74.556	Phascolarctos_cinereus
ENSFHEG00000013867	-	64	96.212	ENSPLAG00000003902	polr1c	100	96.212	Poecilia_latipinna
ENSFHEG00000013867	-	84	96.512	ENSPMEG00000011877	-	57	93.605	Poecilia_mexicana
ENSFHEG00000013867	-	84	96.512	ENSPMEG00000008420	polr1c	57	93.605	Poecilia_mexicana
ENSFHEG00000013867	-	87	70.950	ENSPPYG00000016645	POLR1C	50	70.950	Pongo_abelii
ENSFHEG00000013867	-	87	69.832	ENSPCOG00000024628	POLR1C	59	69.832	Propithecus_coquereli
ENSFHEG00000013867	-	93	66.842	ENSRNOG00000019079	Polr1c	53	66.842	Rattus_norvegicus
ENSFHEG00000013867	-	89	70.330	ENSRBIG00000007155	POLR1C	59	70.391	Rhinopithecus_bieti
ENSFHEG00000013867	-	89	70.330	ENSRROG00000000257	POLR1C	59	70.391	Rhinopithecus_roxellana
ENSFHEG00000013867	-	89	70.330	ENSSBOG00000025735	POLR1C	59	70.950	Saimiri_boliviensis_boliviensis
ENSFHEG00000013867	-	86	77.841	ENSSFOG00015019860	polr1c	50	77.841	Scleropages_formosus
ENSFHEG00000013867	-	84	88.439	ENSSDUG00000015745	polr1c	58	85.227	Seriola_dumerili
ENSFHEG00000013867	-	84	87.861	ENSSLDG00000018285	polr1c	58	84.659	Seriola_lalandi_dorsalis
ENSFHEG00000013867	-	84	86.628	ENSSPAG00000022369	polr1c	50	85.227	Stegastes_partitus
ENSFHEG00000013867	-	88	71.111	ENSSSCG00000028007	POLR1C	50	71.111	Sus_scrofa
ENSFHEG00000013867	-	84	79.651	ENSTRUG00000006264	polr1c	57	79.070	Takifugu_rubripes
ENSFHEG00000013867	-	87	70.391	ENSUAMG00000025602	POLR1C	50	70.391	Ursus_americanus
ENSFHEG00000013867	-	87	70.391	ENSUMAG00000005938	POLR1C	50	70.391	Ursus_maritimus
ENSFHEG00000013867	-	83	71.345	ENSVVUG00000028922	POLR1C	56	71.345	Vulpes_vulpes