EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000013932 (Gene tree)
Gene ID: 105921767
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valine--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 78187 bases
Position: chrKN806347.1:14585-92771
Accession: 105921767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012476	tRNA-synt_1g	PF09334.11	2.9e-15	1	1
ENSFHEP00000012476	Anticodon_1	PF08264.13	1.3e-17	1	1
ENSFHEP00000012476	tRNA-synt_1	PF00133.22	1.6e-194	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019742	-	4649	XM_021313572	ENSFHEP00000012476	970 (aa)	XP_021169247	-

Gene Model

Click here to download ENSFHEG00000013932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000013932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000013932	vars2	91	48.929	ENSFHEG00000010672	vars	75	48.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000013932	vars2	94	76.294	ENSAPOG00000007396	vars2	93	74.802	Acanthochromis_polyacanthus
ENSFHEG00000013932	vars2	94	50.156	ENSAMEG00000012997	VARS2	84	51.185	Ailuropoda_melanoleuca
ENSFHEG00000013932	vars2	99	74.826	ENSACIG00000004344	vars2	94	74.826	Amphilophus_citrinellus
ENSFHEG00000013932	vars2	94	77.019	ENSAOCG00000000476	vars2	93	75.496	Amphiprion_ocellaris
ENSFHEG00000013932	vars2	94	76.725	ENSAPEG00000008646	vars2	91	75.222	Amphiprion_percula
ENSFHEG00000013932	vars2	95	76.416	ENSATEG00000012291	vars2	93	74.876	Anabas_testudineus
ENSFHEG00000013932	vars2	94	51.710	ENSACAG00000022093	VARS2	85	53.074	Anolis_carolinensis
ENSFHEG00000013932	vars2	91	50.754	ENSANAG00000038018	VARS2	84	51.955	Aotus_nancymaae
ENSFHEG00000013932	vars2	98	72.736	ENSACLG00000018673	vars2	93	72.736	Astatotilapia_calliptera
ENSFHEG00000013932	vars2	95	68.172	ENSAMXG00000017773	vars2	96	67.644	Astyanax_mexicanus
ENSFHEG00000013932	vars2	96	49.898	ENSBTAG00000010698	VARS2	86	51.185	Bos_taurus
ENSFHEG00000013932	vars2	91	50.754	ENSCJAG00000019826	VARS2	84	52.067	Callithrix_jacchus
ENSFHEG00000013932	vars2	94	50.515	ENSCAFG00000000454	VARS2	84	52.902	Canis_familiaris
ENSFHEG00000013932	vars2	90	51.944	ENSCAFG00020019387	VARS2	89	53.521	Canis_lupus_dingo
ENSFHEG00000013932	vars2	93	51.480	ENSCHIG00000007847	VARS2	84	52.902	Capra_hircus
ENSFHEG00000013932	vars2	91	51.884	ENSTSYG00000009904	VARS2	84	53.013	Carlito_syrichta
ENSFHEG00000013932	vars2	82	53.270	ENSCAPG00000017770	VARS2	90	53.270	Cavia_aperea
ENSFHEG00000013932	vars2	91	51.557	ENSCPOG00000021834	VARS2	84	52.567	Cavia_porcellus
ENSFHEG00000013932	vars2	91	50.647	ENSCCAG00000037907	VARS2	85	54.212	Cebus_capucinus
ENSFHEG00000013932	vars2	91	50.970	ENSCATG00000032554	VARS2	84	52.291	Cercocebus_atys
ENSFHEG00000013932	vars2	96	50.613	ENSCLAG00000002889	VARS2	86	52.000	Chinchilla_lanigera
ENSFHEG00000013932	vars2	91	51.238	ENSCSAG00000008327	VARS2	84	52.567	Chlorocebus_sabaeus
ENSFHEG00000013932	vars2	92	53.276	ENSCPBG00000021502	VARS2	86	64.526	Chrysemys_picta_bellii
ENSFHEG00000013932	vars2	91	50.968	ENSCANG00000014991	VARS2	83	52.174	Colobus_angolensis_palliatus
ENSFHEG00000013932	vars2	94	50.522	ENSCGRG00001021535	Vars2	86	51.676	Cricetulus_griseus_chok1gshd
ENSFHEG00000013932	vars2	94	50.522	ENSCGRG00000014112	Vars2	86	51.676	Cricetulus_griseus_crigri
ENSFHEG00000013932	vars2	86	71.523	ENSCSEG00000015432	vars2	90	71.523	Cynoglossus_semilaevis
ENSFHEG00000013932	vars2	68	80.113	ENSCVAG00000017765	vars2	98	80.113	Cyprinodon_variegatus
ENSFHEG00000013932	vars2	98	65.196	ENSDARG00000056717	vars2	93	65.196	Danio_rerio
ENSFHEG00000013932	vars2	74	50.528	ENSDORG00000008516	Vars2	84	50.528	Dipodomys_ordii
ENSFHEG00000013932	vars2	91	45.523	ENSETEG00000014844	VARS2	85	45.875	Echinops_telfairi
ENSFHEG00000013932	vars2	91	51.792	ENSEASG00005019997	VARS2	94	52.587	Equus_asinus_asinus
ENSFHEG00000013932	vars2	91	51.561	ENSECAG00000018202	VARS2	84	52.790	Equus_caballus
ENSFHEG00000013932	vars2	98	65.818	ENSELUG00000017824	vars2	93	65.818	Esox_lucius
ENSFHEG00000013932	vars2	97	49.348	ENSFCAG00000010531	VARS2	93	48.947	Felis_catus
ENSFHEG00000013932	vars2	94	50.669	ENSFDAG00000017216	VARS2	91	50.256	Fukomys_damarensis
ENSFHEG00000013932	vars2	91	68.867	ENSGMOG00000018960	vars2	96	68.757	Gadus_morhua
ENSFHEG00000013932	vars2	92	81.569	ENSGAFG00000004737	vars2	94	81.569	Gambusia_affinis
ENSFHEG00000013932	vars2	91	74.946	ENSGACG00000001464	vars2	93	74.946	Gasterosteus_aculeatus
ENSFHEG00000013932	vars2	89	55.022	ENSGAGG00000011652	VARS2	91	55.022	Gopherus_agassizii
ENSFHEG00000013932	vars2	91	50.647	ENSGGOG00000014587	VARS2	84	51.955	Gorilla_gorilla
ENSFHEG00000013932	vars2	99	70.565	ENSHBUG00000002448	vars2	95	70.565	Haplochromis_burtoni
ENSFHEG00000013932	vars2	96	50.000	ENSHGLG00000012886	VARS2	83	52.108	Heterocephalus_glaber_female
ENSFHEG00000013932	vars2	96	49.899	ENSHGLG00100016535	VARS2	86	52.000	Heterocephalus_glaber_male
ENSFHEG00000013932	vars2	66	70.972	ENSHCOG00000017907	vars2	91	70.972	Hippocampus_comes
ENSFHEG00000013932	vars2	91	68.274	ENSIPUG00000015573	Vars2	91	67.042	Ictalurus_punctatus
ENSFHEG00000013932	vars2	92	50.955	ENSSTOG00000009924	VARS2	85	51.705	Ictidomys_tridecemlineatus
ENSFHEG00000013932	vars2	94	50.884	ENSJJAG00000011144	Vars2	90	50.884	Jaculus_jaculus
ENSFHEG00000013932	vars2	98	74.853	ENSKMAG00000001393	vars2	94	75.049	Kryptolebias_marmoratus
ENSFHEG00000013932	vars2	98	67.389	ENSLBEG00000011949	vars2	93	67.389	Labrus_bergylta
ENSFHEG00000013932	vars2	57	79.891	ENSLBEG00000005480	-	81	79.891	Labrus_bergylta
ENSFHEG00000013932	vars2	94	49.074	ENSLACG00000001576	-	90	49.947	Latimeria_chalumnae
ENSFHEG00000013932	vars2	93	50.674	ENSLAFG00000015183	VARS2	86	52.035	Loxodonta_africana
ENSFHEG00000013932	vars2	91	50.754	ENSMFAG00000042367	VARS2	86	51.262	Macaca_fascicularis
ENSFHEG00000013932	vars2	91	50.754	ENSMMUG00000018609	VARS2	86	51.262	Macaca_mulatta
ENSFHEG00000013932	vars2	91	50.647	ENSMNEG00000043163	VARS2	86	51.153	Macaca_nemestrina
ENSFHEG00000013932	vars2	92	50.691	ENSMLEG00000041728	VARS2	82	52.179	Mandrillus_leucophaeus
ENSFHEG00000013932	vars2	94	73.499	ENSMAMG00000020339	vars2	91	72.967	Mastacembelus_armatus
ENSFHEG00000013932	vars2	98	72.736	ENSMZEG00005017669	vars2	93	72.736	Maylandia_zebra
ENSFHEG00000013932	vars2	92	51.547	ENSMAUG00000018946	Vars2	84	52.679	Mesocricetus_auratus
ENSFHEG00000013932	vars2	84	52.511	ENSMICG00000005365	VARS2	92	54.335	Microcebus_murinus
ENSFHEG00000013932	vars2	93	50.652	ENSMOCG00000014607	Vars2	83	52.331	Microtus_ochrogaster
ENSFHEG00000013932	vars2	92	73.936	ENSMMOG00000012122	vars2	92	72.736	Mola_mola
ENSFHEG00000013932	vars2	98	47.873	ENSMODG00000015848	VARS2	93	47.478	Monodelphis_domestica
ENSFHEG00000013932	vars2	91	74.569	ENSMALG00000009217	vars2	92	74.569	Monopterus_albus
ENSFHEG00000013932	vars2	93	51.148	MGP_CAROLIEiJ_G0021529	Vars2	97	50.355	Mus_caroli
ENSFHEG00000013932	vars2	93	50.939	ENSMUSG00000038838	Vars2	93	52.764	Mus_musculus
ENSFHEG00000013932	vars2	92	51.757	MGP_PahariEiJ_G0020523	Vars2	93	52.764	Mus_pahari
ENSFHEG00000013932	vars2	93	51.148	MGP_SPRETEiJ_G0022436	Vars2	97	50.709	Mus_spretus
ENSFHEG00000013932	vars2	92	51.809	ENSMPUG00000011643	VARS2	85	52.527	Mustela_putorius_furo
ENSFHEG00000013932	vars2	91	51.290	ENSMLUG00000002356	VARS2	82	51.868	Myotis_lucifugus
ENSFHEG00000013932	vars2	91	47.849	ENSNGAG00000020607	Vars2	85	48.352	Nannospalax_galili
ENSFHEG00000013932	vars2	91	50.000	ENSNLEG00000005625	VARS2	83	51.285	Nomascus_leucogenys
ENSFHEG00000013932	vars2	73	56.856	ENSMEUG00000014475	VARS2	76	56.856	Notamacropus_eugenii
ENSFHEG00000013932	vars2	76	53.261	ENSOPRG00000000682	VARS2	70	61.589	Ochotona_princeps
ENSFHEG00000013932	vars2	91	51.453	ENSODEG00000017965	VARS2	84	52.455	Octodon_degus
ENSFHEG00000013932	vars2	60	81.841	ENSONIG00000004734	vars2	58	81.841	Oreochromis_niloticus
ENSFHEG00000013932	vars2	65	43.093	ENSOANG00000000398	-	82	43.093	Ornithorhynchus_anatinus
ENSFHEG00000013932	vars2	93	48.113	ENSOCUG00000021496	VARS2	54	49.227	Oryctolagus_cuniculus
ENSFHEG00000013932	vars2	98	68.442	ENSORLG00000010632	vars2	93	68.442	Oryzias_latipes
ENSFHEG00000013932	vars2	98	68.442	ENSORLG00020018584	vars2	93	68.442	Oryzias_latipes_hni
ENSFHEG00000013932	vars2	92	70.763	ENSORLG00015010408	vars2	93	68.245	Oryzias_latipes_hsok
ENSFHEG00000013932	vars2	94	69.958	ENSOMEG00000008360	vars2	94	67.976	Oryzias_melastigma
ENSFHEG00000013932	vars2	94	49.634	ENSOGAG00000006087	VARS2	84	50.701	Otolemur_garnettii
ENSFHEG00000013932	vars2	93	50.898	ENSOARG00000010844	VARS2	83	52.285	Ovis_aries
ENSFHEG00000013932	vars2	91	50.647	ENSPPAG00000041141	VARS2	84	51.844	Pan_paniscus
ENSFHEG00000013932	vars2	96	49.144	ENSPPRG00000006751	VARS2	90	49.194	Panthera_pardus
ENSFHEG00000013932	vars2	96	49.144	ENSPTIG00000017799	VARS2	88	52.567	Panthera_tigris_altaica
ENSFHEG00000013932	vars2	91	50.647	ENSPTRG00000034497	VARS2	84	51.844	Pan_troglodytes
ENSFHEG00000013932	vars2	91	50.862	ENSPANG00000018481	VARS2	87	52.179	Papio_anubis
ENSFHEG00000013932	vars2	94	65.935	ENSPKIG00000011372	vars2	91	65.102	Paramormyrops_kingsleyae
ENSFHEG00000013932	vars2	61	63.333	ENSPSIG00000006206	VARS2	86	63.333	Pelodiscus_sinensis
ENSFHEG00000013932	vars2	95	68.680	ENSPMGG00000000465	vars2	91	68.680	Periophthalmus_magnuspinnatus
ENSFHEG00000013932	vars2	94	50.468	ENSPEMG00000014691	Vars2	87	51.509	Peromyscus_maniculatus_bairdii
ENSFHEG00000013932	vars2	89	54.920	ENSPCIG00000015040	VARS2	85	54.577	Phascolarctos_cinereus
ENSFHEG00000013932	vars2	96	79.594	ENSPFOG00000017616	vars2	91	79.594	Poecilia_formosa
ENSFHEG00000013932	vars2	98	79.485	ENSPLAG00000019778	vars2	93	79.485	Poecilia_latipinna
ENSFHEG00000013932	vars2	98	79.683	ENSPMEG00000011123	vars2	94	79.683	Poecilia_mexicana
ENSFHEG00000013932	vars2	98	71.175	ENSPREG00000014998	vars2	95	71.175	Poecilia_reticulata
ENSFHEG00000013932	vars2	91	50.647	ENSPPYG00000016424	VARS2	84	51.955	Pongo_abelii
ENSFHEG00000013932	vars2	64	54.228	ENSPCAG00000006946	VARS2	63	54.228	Procavia_capensis
ENSFHEG00000013932	vars2	93	49.792	ENSPCOG00000014839	VARS2	82	51.556	Propithecus_coquereli
ENSFHEG00000013932	vars2	94	49.532	ENSPVAG00000004197	VARS2	87	50.159	Pteropus_vampyrus
ENSFHEG00000013932	vars2	84	80.863	ENSPNYG00000010314	vars2	92	80.863	Pundamilia_nyererei
ENSFHEG00000013932	vars2	94	68.144	ENSPNAG00000026793	vars2	90	67.614	Pygocentrus_nattereri
ENSFHEG00000013932	vars2	93	50.209	ENSRNOG00000000833	Vars2	84	52.009	Rattus_norvegicus
ENSFHEG00000013932	vars2	91	50.862	ENSRBIG00000032725	VARS2	84	52.296	Rhinopithecus_bieti
ENSFHEG00000013932	vars2	91	50.862	ENSRROG00000043847	VARS2	84	52.179	Rhinopithecus_roxellana
ENSFHEG00000013932	vars2	91	49.579	ENSSBOG00000033240	VARS2	82	50.818	Saimiri_boliviensis_boliviensis
ENSFHEG00000013932	vars2	91	51.816	ENSSHAG00000009307	VARS2	89	51.709	Sarcophilus_harrisii
ENSFHEG00000013932	vars2	95	65.811	ENSSFOG00015016187	vars2	90	65.416	Scleropages_formosus
ENSFHEG00000013932	vars2	98	72.239	ENSSMAG00000020842	vars2	93	72.736	Scophthalmus_maximus
ENSFHEG00000013932	vars2	98	74.209	ENSSDUG00000011598	vars2	94	74.729	Seriola_dumerili
ENSFHEG00000013932	vars2	98	73.154	ENSSLDG00000015492	vars2	93	73.579	Seriola_lalandi_dorsalis
ENSFHEG00000013932	vars2	82	56.398	ENSSPUG00000014700	VARS2	87	56.398	Sphenodon_punctatus
ENSFHEG00000013932	vars2	98	72.537	ENSSPAG00000004654	vars2	93	72.537	Stegastes_partitus
ENSFHEG00000013932	vars2	91	51.561	ENSSSCG00000001384	VARS2	92	51.974	Sus_scrofa
ENSFHEG00000013932	vars2	94	70.084	ENSTRUG00000005264	vars2	94	68.342	Takifugu_rubripes
ENSFHEG00000013932	vars2	95	66.701	ENSTNIG00000005916	vars2	91	66.062	Tetraodon_nigroviridis
ENSFHEG00000013932	vars2	77	52.970	ENSTTRG00000012243	VARS2	76	60.403	Tursiops_truncatus
ENSFHEG00000013932	vars2	95	49.897	ENSUAMG00000026124	VARS2	92	52.154	Ursus_americanus
ENSFHEG00000013932	vars2	95	50.257	ENSUMAG00000019894	VARS2	90	49.846	Ursus_maritimus
ENSFHEG00000013932	vars2	94	50.466	ENSVVUG00000010754	VARS2	80	52.790	Vulpes_vulpes
ENSFHEG00000013932	vars2	87	52.232	ENSXETG00000003036	vars2	93	52.232	Xenopus_tropicalis
ENSFHEG00000013932	vars2	100	81.311	ENSXCOG00000003455	vars2	97	81.311	Xiphophorus_couchianus
ENSFHEG00000013932	vars2	100	81.854	ENSXMAG00000013523	vars2	94	81.854	Xiphophorus_maculatus