EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000014317 (Gene tree)
Gene ID: 105921117
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15017 bases
Position: chrKN806217.1:99536-114552
Accession: 105921117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000029540	PRP38	PF03371.15	6.9e-63	1	1
ENSFHEP00000029548	PRP38	PF03371.15	7.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020223	-	888	-	ENSFHEP00000029540	295 (aa)	-	-
ENSFHET00000032160	-	1094	XM_012856810	ENSFHEP00000029548	295 (aa)	XP_012712264	UPI000644A86D

Gene Model

Click here to download ENSFHEG00000014317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000014317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000014317	prpf38a	78	88.745	ENSG00000134748	PRPF38A	84	78.788	Homo_sapiens
ENSFHEG00000014317	prpf38a	99	94.898	ENSAPOG00000011652	prpf38a	90	82.796	Acanthochromis_polyacanthus
ENSFHEG00000014317	prpf38a	78	88.745	ENSAMEG00000009319	PRPF38A	84	78.788	Ailuropoda_melanoleuca
ENSFHEG00000014317	prpf38a	77	92.478	ENSACIG00000012292	prpf38a	74	92.478	Amphilophus_citrinellus
ENSFHEG00000014317	prpf38a	99	94.898	ENSAOCG00000018004	prpf38a	90	82.796	Amphiprion_ocellaris
ENSFHEG00000014317	prpf38a	99	94.898	ENSAPEG00000021414	prpf38a	90	82.796	Amphiprion_percula
ENSFHEG00000014317	prpf38a	75	94.118	ENSATEG00000004608	prpf38a	90	85.211	Anabas_testudineus
ENSFHEG00000014317	prpf38a	56	85.542	ENSAPLG00000005827	PRPF38A	79	74.874	Anas_platyrhynchos
ENSFHEG00000014317	prpf38a	78	87.446	ENSACAG00000008249	PRPF38A	84	79.167	Anolis_carolinensis
ENSFHEG00000014317	prpf38a	78	88.745	ENSANAG00000027839	PRPF38A	84	78.788	Aotus_nancymaae
ENSFHEG00000014317	prpf38a	78	57.447	ENSANAG00000029204	-	68	57.014	Aotus_nancymaae
ENSFHEG00000014317	prpf38a	75	93.665	ENSACLG00000021595	prpf38a	90	82.437	Astatotilapia_calliptera
ENSFHEG00000014317	prpf38a	75	93.665	ENSAMXG00000029274	prpf38a	90	81.625	Astyanax_mexicanus
ENSFHEG00000014317	prpf38a	87	85.328	ENSBTAG00000002720	PRPF38A	88	77.992	Bos_taurus
ENSFHEG00000014317	prpf38a	66	63.077	WBGene00008380	prp-38	59	64.894	Caenorhabditis_elegans
ENSFHEG00000014317	prpf38a	87	84.942	ENSCJAG00000021594	PRPF38A	87	77.992	Callithrix_jacchus
ENSFHEG00000014317	prpf38a	78	88.745	ENSCAFG00000003740	PRPF38A	84	78.788	Canis_familiaris
ENSFHEG00000014317	prpf38a	78	88.745	ENSCAFG00020010939	PRPF38A	84	78.788	Canis_lupus_dingo
ENSFHEG00000014317	prpf38a	78	88.745	ENSCHIG00000024730	PRPF38A	84	78.788	Capra_hircus
ENSFHEG00000014317	prpf38a	64	85.638	ENSTSYG00000031994	-	77	74.208	Carlito_syrichta
ENSFHEG00000014317	prpf38a	78	88.745	ENSTSYG00000009868	-	84	78.788	Carlito_syrichta
ENSFHEG00000014317	prpf38a	87	85.938	ENSCPOG00000005079	PRPF38A	84	78.788	Cavia_porcellus
ENSFHEG00000014317	prpf38a	78	88.745	ENSCCAG00000026502	PRPF38A	84	78.788	Cebus_capucinus
ENSFHEG00000014317	prpf38a	97	53.979	ENSCATG00000044190	-	65	57.971	Cercocebus_atys
ENSFHEG00000014317	prpf38a	78	88.745	ENSCATG00000032296	PRPF38A	84	78.788	Cercocebus_atys
ENSFHEG00000014317	prpf38a	78	88.745	ENSCLAG00000005816	PRPF38A	84	78.788	Chinchilla_lanigera
ENSFHEG00000014317	prpf38a	78	87.446	ENSCPBG00000014791	PRPF38A	84	79.167	Chrysemys_picta_bellii
ENSFHEG00000014317	prpf38a	78	69.697	ENSCSAVG00000009580	-	62	76.064	Ciona_savignyi
ENSFHEG00000014317	prpf38a	78	88.745	ENSCANG00000032608	PRPF38A	87	78.788	Colobus_angolensis_palliatus
ENSFHEG00000014317	prpf38a	78	88.745	ENSCGRG00001018502	-	84	78.788	Cricetulus_griseus_chok1gshd
ENSFHEG00000014317	prpf38a	88	72.031	ENSCGRG00001002557	-	73	75.576	Cricetulus_griseus_chok1gshd
ENSFHEG00000014317	prpf38a	78	88.745	ENSCGRG00000014868	Prpf38a	84	78.788	Cricetulus_griseus_crigri
ENSFHEG00000014317	prpf38a	99	94.218	ENSCSEG00000001269	prpf38a	74	94.470	Cynoglossus_semilaevis
ENSFHEG00000014317	prpf38a	100	98.644	ENSCVAG00000012305	prpf38a	95	98.644	Cyprinodon_variegatus
ENSFHEG00000014317	prpf38a	75	93.213	ENSDARG00000039213	prpf38a	90	80.565	Danio_rerio
ENSFHEG00000014317	prpf38a	78	88.745	ENSDNOG00000042326	PRPF38A	85	78.788	Dasypus_novemcinctus
ENSFHEG00000014317	prpf38a	88	75.954	ENSDORG00000023691	-	75	82.949	Dipodomys_ordii
ENSFHEG00000014317	prpf38a	71	96.875	ENSDORG00000023857	-	63	96.875	Dipodomys_ordii
ENSFHEG00000014317	prpf38a	88	75.954	ENSDORG00000025371	-	75	82.949	Dipodomys_ordii
ENSFHEG00000014317	prpf38a	68	72.139	FBgn0050342	Prp38	57	75.000	Drosophila_melanogaster
ENSFHEG00000014317	prpf38a	80	80.335	ENSEBUG00000012588	prpf38a	85	72.491	Eptatretus_burgeri
ENSFHEG00000014317	prpf38a	78	88.745	ENSEASG00005014427	PRPF38A	84	78.788	Equus_asinus_asinus
ENSFHEG00000014317	prpf38a	78	88.745	ENSECAG00000022628	PRPF38A	84	78.788	Equus_caballus
ENSFHEG00000014317	prpf38a	75	92.308	ENSELUG00000021094	prpf38a	95	81.362	Esox_lucius
ENSFHEG00000014317	prpf38a	78	88.745	ENSFCAG00000002518	PRPF38A	84	78.788	Felis_catus
ENSFHEG00000014317	prpf38a	64	85.789	ENSFALG00000005598	-	81	75.785	Ficedula_albicollis
ENSFHEG00000014317	prpf38a	100	76.431	ENSFALG00000003612	-	72	83.871	Ficedula_albicollis
ENSFHEG00000014317	prpf38a	87	85.938	ENSFDAG00000011287	PRPF38A	84	78.788	Fukomys_damarensis
ENSFHEG00000014317	prpf38a	56	97.590	ENSGMOG00000011384	prpf38a	54	97.590	Gadus_morhua
ENSFHEG00000014317	prpf38a	78	88.312	ENSGALG00000010627	PRPF38A	84	79.545	Gallus_gallus
ENSFHEG00000014317	prpf38a	100	98.305	ENSGAFG00000012422	prpf38a	95	98.305	Gambusia_affinis
ENSFHEG00000014317	prpf38a	52	90.968	ENSGACG00000000182	-	92	91.026	Gasterosteus_aculeatus
ENSFHEG00000014317	prpf38a	75	92.377	ENSGACG00000005423	prpf38a	90	82.517	Gasterosteus_aculeatus
ENSFHEG00000014317	prpf38a	78	87.446	ENSGAGG00000020547	PRPF38A	84	78.788	Gopherus_agassizii
ENSFHEG00000014317	prpf38a	78	88.745	ENSGGOG00000003940	PRPF38A	84	78.788	Gorilla_gorilla
ENSFHEG00000014317	prpf38a	69	96.552	ENSHBUG00000020572	prpf38a	86	96.552	Haplochromis_burtoni
ENSFHEG00000014317	prpf38a	78	88.745	ENSHGLG00000000475	PRPF38A	84	78.788	Heterocephalus_glaber_female
ENSFHEG00000014317	prpf38a	88	73.946	ENSHGLG00000007918	-	70	77.419	Heterocephalus_glaber_female
ENSFHEG00000014317	prpf38a	78	88.745	ENSHGLG00100008935	PRPF38A	84	78.788	Heterocephalus_glaber_male
ENSFHEG00000014317	prpf38a	88	73.946	ENSHGLG00100003928	-	70	77.419	Heterocephalus_glaber_male
ENSFHEG00000014317	prpf38a	88	74.632	ENSHCOG00000020781	prpf38a	59	95.213	Hippocampus_comes
ENSFHEG00000014317	prpf38a	95	80.212	ENSIPUG00000005757	prpf38a	70	92.202	Ictalurus_punctatus
ENSFHEG00000014317	prpf38a	78	88.745	ENSSTOG00000015610	PRPF38A	84	78.788	Ictidomys_tridecemlineatus
ENSFHEG00000014317	prpf38a	78	87.879	ENSJJAG00000015811	Prpf38a	84	78.030	Jaculus_jaculus
ENSFHEG00000014317	prpf38a	100	96.949	ENSKMAG00000006588	prpf38a	95	96.949	Kryptolebias_marmoratus
ENSFHEG00000014317	prpf38a	99	92.857	ENSLBEG00000020585	prpf38a	90	81.004	Labrus_bergylta
ENSFHEG00000014317	prpf38a	76	87.556	ENSLACG00000011495	PRPF38A	84	77.652	Latimeria_chalumnae
ENSFHEG00000014317	prpf38a	75	89.640	ENSLOCG00000006262	prpf38a	91	79.286	Lepisosteus_oculatus
ENSFHEG00000014317	prpf38a	78	88.745	ENSLAFG00000025862	PRPF38A	84	78.788	Loxodonta_africana
ENSFHEG00000014317	prpf38a	87	84.942	ENSMFAG00000039449	PRPF38A	87	77.992	Macaca_fascicularis
ENSFHEG00000014317	prpf38a	64	86.316	ENSMMUG00000014333	PRPF38A	79	74.554	Macaca_mulatta
ENSFHEG00000014317	prpf38a	97	53.979	ENSMNEG00000040242	-	65	58.454	Macaca_nemestrina
ENSFHEG00000014317	prpf38a	78	88.745	ENSMNEG00000031221	PRPF38A	84	78.788	Macaca_nemestrina
ENSFHEG00000014317	prpf38a	78	88.745	ENSMLEG00000041105	PRPF38A	84	78.788	Mandrillus_leucophaeus
ENSFHEG00000014317	prpf38a	75	95.023	ENSMAMG00000015431	prpf38a	90	83.154	Mastacembelus_armatus
ENSFHEG00000014317	prpf38a	75	93.665	ENSMZEG00005017838	prpf38a	90	82.437	Maylandia_zebra
ENSFHEG00000014317	prpf38a	78	88.312	ENSMGAG00000011176	PRPF38A	87	79.545	Meleagris_gallopavo
ENSFHEG00000014317	prpf38a	89	84.091	ENSMAUG00000018029	-	82	85.253	Mesocricetus_auratus
ENSFHEG00000014317	prpf38a	78	88.745	ENSMICG00000014193	PRPF38A	84	78.788	Microcebus_murinus
ENSFHEG00000014317	prpf38a	78	88.745	ENSMOCG00000013080	Prpf38a	84	78.788	Microtus_ochrogaster
ENSFHEG00000014317	prpf38a	88	88.550	ENSMMOG00000016972	prpf38a	85	88.168	Mola_mola
ENSFHEG00000014317	prpf38a	78	85.776	ENSMODG00000000644	PRPF38A	84	76.604	Monodelphis_domestica
ENSFHEG00000014317	prpf38a	75	95.023	ENSMALG00000019363	prpf38a	88	83.513	Monopterus_albus
ENSFHEG00000014317	prpf38a	78	88.312	MGP_CAROLIEiJ_G0026269	Prpf38a	84	78.409	Mus_caroli
ENSFHEG00000014317	prpf38a	78	88.312	ENSMUSG00000063800	Prpf38a	84	78.409	Mus_musculus
ENSFHEG00000014317	prpf38a	78	88.312	MGP_PahariEiJ_G0028602	Prpf38a	84	78.409	Mus_pahari
ENSFHEG00000014317	prpf38a	78	88.312	MGP_SPRETEiJ_G0027238	Prpf38a	93	93.085	Mus_spretus
ENSFHEG00000014317	prpf38a	78	88.745	ENSMPUG00000006896	PRPF38A	84	78.788	Mustela_putorius_furo
ENSFHEG00000014317	prpf38a	87	86.328	ENSNGAG00000011884	Prpf38a	84	78.788	Nannospalax_galili
ENSFHEG00000014317	prpf38a	77	92.478	ENSNBRG00000004013	prpf38a	73	92.478	Neolamprologus_brichardi
ENSFHEG00000014317	prpf38a	100	63.880	ENSNLEG00000012592	-	66	59.447	Nomascus_leucogenys
ENSFHEG00000014317	prpf38a	71	87.981	ENSNLEG00000017999	PRPF38A	76	77.178	Nomascus_leucogenys
ENSFHEG00000014317	prpf38a	97	57.045	ENSNLEG00000033398	-	59	52.074	Nomascus_leucogenys
ENSFHEG00000014317	prpf38a	78	84.416	ENSMEUG00000003860	PRPF38A	84	75.758	Notamacropus_eugenii
ENSFHEG00000014317	prpf38a	77	89.035	ENSOPRG00000008985	PRPF38A	90	89.862	Ochotona_princeps
ENSFHEG00000014317	prpf38a	78	88.745	ENSODEG00000005869	PRPF38A	84	78.788	Octodon_degus
ENSFHEG00000014317	prpf38a	75	93.213	ENSONIG00000007816	prpf38a	90	82.079	Oreochromis_niloticus
ENSFHEG00000014317	prpf38a	78	45.064	ENSOANG00000009541	-	85	41.264	Ornithorhynchus_anatinus
ENSFHEG00000014317	prpf38a	78	88.745	ENSOCUG00000000963	PRPF38A	84	78.788	Oryctolagus_cuniculus
ENSFHEG00000014317	prpf38a	100	95.254	ENSORLG00000013485	prpf38a	94	83.154	Oryzias_latipes
ENSFHEG00000014317	prpf38a	100	95.254	ENSORLG00020002130	prpf38a	90	96.063	Oryzias_latipes_hni
ENSFHEG00000014317	prpf38a	100	94.915	ENSORLG00015021393	prpf38a	95	82.796	Oryzias_latipes_hsok
ENSFHEG00000014317	prpf38a	99	95.238	ENSOMEG00000016333	prpf38a	91	82.918	Oryzias_melastigma
ENSFHEG00000014317	prpf38a	78	88.745	ENSOGAG00000005423	PRPF38A	84	78.788	Otolemur_garnettii
ENSFHEG00000014317	prpf38a	78	88.745	ENSOARG00000005373	PRPF38A	84	78.788	Ovis_aries
ENSFHEG00000014317	prpf38a	97	69.416	ENSPPAG00000033867	-	65	71.564	Pan_paniscus
ENSFHEG00000014317	prpf38a	78	88.745	ENSPPAG00000030905	PRPF38A	84	78.788	Pan_paniscus
ENSFHEG00000014317	prpf38a	78	88.745	ENSPPRG00000013268	PRPF38A	84	78.788	Panthera_pardus
ENSFHEG00000014317	prpf38a	78	88.745	ENSPTIG00000015419	PRPF38A	84	78.788	Panthera_tigris_altaica
ENSFHEG00000014317	prpf38a	87	84.942	ENSPTRG00000000739	PRPF38A	87	77.992	Pan_troglodytes
ENSFHEG00000014317	prpf38a	78	88.745	ENSPANG00000015483	PRPF38A	84	78.788	Papio_anubis
ENSFHEG00000014317	prpf38a	75	91.855	ENSPKIG00000011439	prpf38a	91	80.645	Paramormyrops_kingsleyae
ENSFHEG00000014317	prpf38a	78	87.013	ENSPSIG00000017487	PRPF38A	84	79.167	Pelodiscus_sinensis
ENSFHEG00000014317	prpf38a	97	82.105	ENSPMGG00000021352	prpf38a	78	92.920	Periophthalmus_magnuspinnatus
ENSFHEG00000014317	prpf38a	100	80.066	ENSPEMG00000011212	-	86	73.091	Peromyscus_maniculatus_bairdii
ENSFHEG00000014317	prpf38a	78	88.745	ENSPEMG00000023277	-	84	78.788	Peromyscus_maniculatus_bairdii
ENSFHEG00000014317	prpf38a	78	85.345	ENSPCIG00000022369	-	84	76.226	Phascolarctos_cinereus
ENSFHEG00000014317	prpf38a	100	98.305	ENSPFOG00000004248	prpf38a	95	98.305	Poecilia_formosa
ENSFHEG00000014317	prpf38a	100	98.305	ENSPLAG00000010328	prpf38a	95	98.305	Poecilia_latipinna
ENSFHEG00000014317	prpf38a	100	98.305	ENSPMEG00000011804	prpf38a	95	98.305	Poecilia_mexicana
ENSFHEG00000014317	prpf38a	96	87.372	ENSPREG00000002835	prpf38a	89	87.586	Poecilia_reticulata
ENSFHEG00000014317	prpf38a	78	77.966	ENSPPYG00000001348	PRPF38A	84	69.517	Pongo_abelii
ENSFHEG00000014317	prpf38a	78	88.312	ENSPCAG00000013328	PRPF38A	84	78.409	Procavia_capensis
ENSFHEG00000014317	prpf38a	78	88.745	ENSPCOG00000016387	-	84	78.788	Propithecus_coquereli
ENSFHEG00000014317	prpf38a	94	70.397	ENSPCOG00000020709	-	64	79.255	Propithecus_coquereli
ENSFHEG00000014317	prpf38a	78	88.745	ENSPVAG00000009803	PRPF38A	84	78.788	Pteropus_vampyrus
ENSFHEG00000014317	prpf38a	75	93.665	ENSPNYG00000005571	prpf38a	90	82.437	Pundamilia_nyererei
ENSFHEG00000014317	prpf38a	75	93.665	ENSPNAG00000010399	prpf38a	69	94.009	Pygocentrus_nattereri
ENSFHEG00000014317	prpf38a	78	89.177	ENSRNOG00000009451	Prpf38a	84	79.167	Rattus_norvegicus
ENSFHEG00000014317	prpf38a	78	88.745	ENSRBIG00000036442	PRPF38A	87	78.788	Rhinopithecus_bieti
ENSFHEG00000014317	prpf38a	100	70.370	ENSRROG00000040003	-	73	71.300	Rhinopithecus_roxellana
ENSFHEG00000014317	prpf38a	78	88.745	ENSRROG00000032788	PRPF38A	84	78.788	Rhinopithecus_roxellana
ENSFHEG00000014317	prpf38a	78	88.745	ENSSBOG00000019515	PRPF38A	84	78.788	Saimiri_boliviensis_boliviensis
ENSFHEG00000014317	prpf38a	99	67.340	ENSSHAG00000006029	-	72	77.880	Sarcophilus_harrisii
ENSFHEG00000014317	prpf38a	64	82.632	ENSSHAG00000006906	-	81	72.197	Sarcophilus_harrisii
ENSFHEG00000014317	prpf38a	75	90.541	ENSSFOG00015013572	prpf38a	91	80.357	Scleropages_formosus
ENSFHEG00000014317	prpf38a	75	94.570	ENSSMAG00000015379	prpf38a	91	82.796	Scophthalmus_maximus
ENSFHEG00000014317	prpf38a	100	96.271	ENSSDUG00000001324	prpf38a	95	96.271	Seriola_dumerili
ENSFHEG00000014317	prpf38a	100	96.271	ENSSLDG00000014803	prpf38a	95	96.271	Seriola_lalandi_dorsalis
ENSFHEG00000014317	prpf38a	78	66.234	ENSSARG00000014458	PRPF38A	84	59.091	Sorex_araneus
ENSFHEG00000014317	prpf38a	78	86.580	ENSSPUG00000013259	PRPF38A	84	78.409	Sphenodon_punctatus
ENSFHEG00000014317	prpf38a	97	66.438	ENSSPAG00000010449	prpf38a	92	66.438	Stegastes_partitus
ENSFHEG00000014317	prpf38a	78	88.745	ENSSSCG00000028288	PRPF38A	84	78.788	Sus_scrofa
ENSFHEG00000014317	prpf38a	78	83.117	ENSTGUG00000008995	PRPF38A	84	75.000	Taeniopygia_guttata
ENSFHEG00000014317	prpf38a	75	93.665	ENSTRUG00000003374	prpf38a	67	94.009	Takifugu_rubripes
ENSFHEG00000014317	prpf38a	99	93.919	ENSTNIG00000005533	prpf38a	95	93.939	Tetraodon_nigroviridis
ENSFHEG00000014317	prpf38a	78	88.745	ENSTBEG00000000725	PRPF38A	84	78.788	Tupaia_belangeri
ENSFHEG00000014317	prpf38a	78	88.745	ENSTTRG00000016139	PRPF38A	84	78.788	Tursiops_truncatus
ENSFHEG00000014317	prpf38a	78	88.745	ENSUAMG00000000625	PRPF38A	84	78.788	Ursus_americanus
ENSFHEG00000014317	prpf38a	78	88.745	ENSUMAG00000022674	PRPF38A	84	78.788	Ursus_maritimus
ENSFHEG00000014317	prpf38a	78	89.177	ENSVPAG00000000907	PRPF38A	84	79.167	Vicugna_pacos
ENSFHEG00000014317	prpf38a	78	88.745	ENSVVUG00000004475	PRPF38A	84	78.788	Vulpes_vulpes
ENSFHEG00000014317	prpf38a	75	86.878	ENSXETG00000008060	prpf38a	91	74.476	Xenopus_tropicalis
ENSFHEG00000014317	prpf38a	99	93.919	ENSXCOG00000007393	prpf38a	72	95.890	Xiphophorus_couchianus
ENSFHEG00000014317	prpf38a	100	98.305	ENSXMAG00000026143	prpf38a	95	98.305	Xiphophorus_maculatus