EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000014333 (Gene tree)
Gene ID: 105923920
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 18562 bases
Position: chrKN805554.1:23284-41845
Accession: 105923920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012829	SF3b1	PF08920.10	1.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020201	-	4565	XM_012859842	ENSFHEP00000012829	1315 (aa)	XP_012715296	UPI000644B6A9

Gene Model

Click here to download ENSFHEG00000014333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000014333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000014333	sf3b1	100	92.938	ENSG00000115524	SF3B1	100	92.938	Homo_sapiens
ENSFHEG00000014333	sf3b1	100	97.872	ENSAPOG00000011894	sf3b1	100	97.872	Acanthochromis_polyacanthus
ENSFHEG00000014333	sf3b1	99	92.819	ENSAMEG00000013809	SF3B1	99	92.819	Ailuropoda_melanoleuca
ENSFHEG00000014333	sf3b1	100	96.502	ENSACIG00000020910	sf3b1	97	96.502	Amphilophus_citrinellus
ENSFHEG00000014333	sf3b1	100	97.948	ENSAOCG00000004478	sf3b1	100	97.948	Amphiprion_ocellaris
ENSFHEG00000014333	sf3b1	100	97.948	ENSAPEG00000012937	sf3b1	100	97.948	Amphiprion_percula
ENSFHEG00000014333	sf3b1	100	97.643	ENSATEG00000020435	sf3b1	100	97.643	Anabas_testudineus
ENSFHEG00000014333	sf3b1	99	92.956	ENSAPLG00000003993	SF3B1	99	92.956	Anas_platyrhynchos
ENSFHEG00000014333	sf3b1	100	92.781	ENSACAG00000009612	SF3B1	100	92.781	Anolis_carolinensis
ENSFHEG00000014333	sf3b1	100	92.938	ENSANAG00000021577	SF3B1	100	94.949	Aotus_nancymaae
ENSFHEG00000014333	sf3b1	100	96.502	ENSACLG00000023470	sf3b1	100	96.502	Astatotilapia_calliptera
ENSFHEG00000014333	sf3b1	100	96.128	ENSAMXG00000002219	sf3b1	100	96.128	Astyanax_mexicanus
ENSFHEG00000014333	sf3b1	100	92.938	ENSBTAG00000008915	SF3B1	100	92.938	Bos_taurus
ENSFHEG00000014333	sf3b1	99	64.763	WBGene00011605	sftb-1	99	64.837	Caenorhabditis_elegans
ENSFHEG00000014333	sf3b1	100	92.938	ENSCJAG00000003902	SF3B1	100	92.938	Callithrix_jacchus
ENSFHEG00000014333	sf3b1	100	92.938	ENSCAFG00000010826	SF3B1	100	92.938	Canis_familiaris
ENSFHEG00000014333	sf3b1	100	92.938	ENSCAFG00020004750	SF3B1	100	92.938	Canis_lupus_dingo
ENSFHEG00000014333	sf3b1	100	92.938	ENSCHIG00000015226	SF3B1	100	92.938	Capra_hircus
ENSFHEG00000014333	sf3b1	100	92.863	ENSTSYG00000009214	SF3B1	100	92.863	Carlito_syrichta
ENSFHEG00000014333	sf3b1	99	92.765	ENSCAPG00000006547	SF3B1	99	92.765	Cavia_aperea
ENSFHEG00000014333	sf3b1	99	92.884	ENSCPOG00000009353	SF3B1	100	92.884	Cavia_porcellus
ENSFHEG00000014333	sf3b1	100	92.938	ENSCCAG00000020506	SF3B1	100	92.938	Cebus_capucinus
ENSFHEG00000014333	sf3b1	100	92.938	ENSCATG00000035735	SF3B1	100	92.938	Cercocebus_atys
ENSFHEG00000014333	sf3b1	99	92.890	ENSCLAG00000014767	SF3B1	99	92.890	Chinchilla_lanigera
ENSFHEG00000014333	sf3b1	100	92.938	ENSCSAG00000011505	SF3B1	100	92.938	Chlorocebus_sabaeus
ENSFHEG00000014333	sf3b1	76	92.474	ENSCHOG00000009860	SF3B1	76	92.474	Choloepus_hoffmanni
ENSFHEG00000014333	sf3b1	100	92.928	ENSCPBG00000021902	SF3B1	99	94.865	Chrysemys_picta_bellii
ENSFHEG00000014333	sf3b1	68	77.863	ENSCING00000002558	-	99	78.295	Ciona_intestinalis
ENSFHEG00000014333	sf3b1	99	79.699	ENSCSAVG00000002559	-	99	79.699	Ciona_savignyi
ENSFHEG00000014333	sf3b1	100	92.938	ENSCANG00000029415	SF3B1	100	92.938	Colobus_angolensis_palliatus
ENSFHEG00000014333	sf3b1	100	92.938	ENSCGRG00001016990	Sf3b1	100	92.938	Cricetulus_griseus_chok1gshd
ENSFHEG00000014333	sf3b1	100	92.938	ENSCGRG00000005301	Sf3b1	100	92.938	Cricetulus_griseus_crigri
ENSFHEG00000014333	sf3b1	100	93.156	ENSCSEG00000003860	sf3b1	100	93.156	Cynoglossus_semilaevis
ENSFHEG00000014333	sf3b1	96	98.337	ENSCVAG00000003680	sf3b1	99	98.337	Cyprinodon_variegatus
ENSFHEG00000014333	sf3b1	100	95.285	ENSDARG00000056138	sf3b1	100	95.285	Danio_rerio
ENSFHEG00000014333	sf3b1	100	92.868	ENSDNOG00000011754	SF3B1	100	92.868	Dasypus_novemcinctus
ENSFHEG00000014333	sf3b1	99	91.354	ENSDORG00000002399	Sf3b1	100	91.278	Dipodomys_ordii
ENSFHEG00000014333	sf3b1	100	75.880	FBgn0031266	Sf3b1	100	75.880	Drosophila_melanogaster
ENSFHEG00000014333	sf3b1	83	91.567	ENSETEG00000009188	SF3B1	100	91.567	Echinops_telfairi
ENSFHEG00000014333	sf3b1	99	85.584	ENSEBUG00000004325	sf3b1	100	88.630	Eptatretus_burgeri
ENSFHEG00000014333	sf3b1	100	92.938	ENSEASG00005020159	SF3B1	98	92.938	Equus_asinus_asinus
ENSFHEG00000014333	sf3b1	100	92.938	ENSECAG00000021657	SF3B1	98	92.938	Equus_caballus
ENSFHEG00000014333	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSFHEG00000014333	sf3b1	100	95.166	ENSELUG00000005977	sf3b1	98	95.166	Esox_lucius
ENSFHEG00000014333	sf3b1	100	92.938	ENSFCAG00000005038	SF3B1	100	92.938	Felis_catus
ENSFHEG00000014333	sf3b1	99	93.032	ENSFALG00000004281	SF3B1	99	93.032	Ficedula_albicollis
ENSFHEG00000014333	sf3b1	100	92.938	ENSFDAG00000017510	SF3B1	100	92.938	Fukomys_damarensis
ENSFHEG00000014333	sf3b1	100	94.765	ENSGMOG00000006773	sf3b1	100	95.144	Gadus_morhua
ENSFHEG00000014333	sf3b1	100	93.004	ENSGALG00000008038	SF3B1	100	93.004	Gallus_gallus
ENSFHEG00000014333	sf3b1	98	98.224	ENSGAFG00000000704	sf3b1	100	98.224	Gambusia_affinis
ENSFHEG00000014333	sf3b1	100	96.128	ENSGACG00000008839	sf3b1	100	96.128	Gasterosteus_aculeatus
ENSFHEG00000014333	sf3b1	100	92.296	ENSGAGG00000017478	SF3B1	100	92.296	Gopherus_agassizii
ENSFHEG00000014333	sf3b1	99	87.615	ENSGGOG00000009264	SF3B1	99	87.538	Gorilla_gorilla
ENSFHEG00000014333	sf3b1	99	96.573	ENSHBUG00000007705	sf3b1	99	96.573	Haplochromis_burtoni
ENSFHEG00000014333	sf3b1	99	92.890	ENSHGLG00000008285	-	99	92.890	Heterocephalus_glaber_female
ENSFHEG00000014333	sf3b1	99	90.902	ENSHGLG00100005535	-	99	90.902	Heterocephalus_glaber_male
ENSFHEG00000014333	sf3b1	100	96.293	ENSHCOG00000016775	sf3b1	100	96.293	Hippocampus_comes
ENSFHEG00000014333	sf3b1	100	95.973	ENSIPUG00000013171	sf3b1	100	95.973	Ictalurus_punctatus
ENSFHEG00000014333	sf3b1	100	92.938	ENSSTOG00000011034	SF3B1	100	92.938	Ictidomys_tridecemlineatus
ENSFHEG00000014333	sf3b1	99	92.863	ENSJJAG00000010903	Sf3b1	99	92.863	Jaculus_jaculus
ENSFHEG00000014333	sf3b1	100	96.967	ENSKMAG00000004009	sf3b1	100	96.967	Kryptolebias_marmoratus
ENSFHEG00000014333	sf3b1	100	96.122	ENSLBEG00000022208	sf3b1	100	96.122	Labrus_bergylta
ENSFHEG00000014333	sf3b1	99	89.590	ENSLACG00000014832	SF3B1	99	89.666	Latimeria_chalumnae
ENSFHEG00000014333	sf3b1	100	94.402	ENSLOCG00000003899	sf3b1	100	94.402	Lepisosteus_oculatus
ENSFHEG00000014333	sf3b1	100	92.938	ENSLAFG00000001956	SF3B1	100	92.938	Loxodonta_africana
ENSFHEG00000014333	sf3b1	99	92.890	ENSMMUG00000022430	SF3B1	99	92.890	Macaca_mulatta
ENSFHEG00000014333	sf3b1	100	92.938	ENSMNEG00000042333	SF3B1	100	94.949	Macaca_nemestrina
ENSFHEG00000014333	sf3b1	94	88.325	ENSMLEG00000026141	SF3B1	98	88.647	Mandrillus_leucophaeus
ENSFHEG00000014333	sf3b1	100	97.262	ENSMAMG00000010241	sf3b1	100	97.262	Mastacembelus_armatus
ENSFHEG00000014333	sf3b1	100	96.502	ENSMZEG00005021254	sf3b1	100	96.502	Maylandia_zebra
ENSFHEG00000014333	sf3b1	99	92.573	ENSMGAG00000007017	SF3B1	99	92.573	Meleagris_gallopavo
ENSFHEG00000014333	sf3b1	99	88.685	ENSMAUG00000009071	Sf3b1	99	88.685	Mesocricetus_auratus
ENSFHEG00000014333	sf3b1	100	92.938	ENSMICG00000013879	SF3B1	100	92.938	Microcebus_murinus
ENSFHEG00000014333	sf3b1	99	88.617	ENSMOCG00000000455	Sf3b1	99	88.617	Microtus_ochrogaster
ENSFHEG00000014333	sf3b1	84	96.455	ENSMMOG00000000475	sf3b1	100	96.455	Mola_mola
ENSFHEG00000014333	sf3b1	100	92.407	ENSMODG00000012275	SF3B1	100	92.407	Monodelphis_domestica
ENSFHEG00000014333	sf3b1	100	97.034	ENSMALG00000017211	sf3b1	100	97.034	Monopterus_albus
ENSFHEG00000014333	sf3b1	100	92.938	MGP_CAROLIEiJ_G0014141	Sf3b1	100	92.938	Mus_caroli
ENSFHEG00000014333	sf3b1	100	92.938	ENSMUSG00000025982	Sf3b1	100	92.938	Mus_musculus
ENSFHEG00000014333	sf3b1	100	92.938	MGP_SPRETEiJ_G0014947	Sf3b1	100	92.938	Mus_spretus
ENSFHEG00000014333	sf3b1	100	92.938	ENSMPUG00000007799	SF3B1	100	92.938	Mustela_putorius_furo
ENSFHEG00000014333	sf3b1	100	91.800	ENSMLUG00000000840	SF3B1	100	91.800	Myotis_lucifugus
ENSFHEG00000014333	sf3b1	99	92.612	ENSNGAG00000021884	-	100	92.612	Nannospalax_galili
ENSFHEG00000014333	sf3b1	100	92.167	ENSNBRG00000015816	sf3b1	100	92.167	Neolamprologus_brichardi
ENSFHEG00000014333	sf3b1	100	92.938	ENSNLEG00000006861	SF3B1	100	92.938	Nomascus_leucogenys
ENSFHEG00000014333	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSFHEG00000014333	sf3b1	100	80.609	ENSOPRG00000008596	SF3B1	100	80.906	Ochotona_princeps
ENSFHEG00000014333	sf3b1	100	92.938	ENSODEG00000011153	-	100	92.938	Octodon_degus
ENSFHEG00000014333	sf3b1	100	96.502	ENSONIG00000013758	sf3b1	100	96.502	Oreochromis_niloticus
ENSFHEG00000014333	sf3b1	83	95.692	ENSOCUG00000012722	-	96	95.692	Oryctolagus_cuniculus
ENSFHEG00000014333	sf3b1	100	97.795	ENSORLG00000020219	sf3b1	100	97.795	Oryzias_latipes
ENSFHEG00000014333	sf3b1	100	97.795	ENSORLG00020001746	sf3b1	100	97.795	Oryzias_latipes_hni
ENSFHEG00000014333	sf3b1	64	96.090	ENSORLG00015001759	sf3b1	98	96.090	Oryzias_latipes_hsok
ENSFHEG00000014333	sf3b1	100	97.567	ENSOMEG00000019231	sf3b1	100	97.567	Oryzias_melastigma
ENSFHEG00000014333	sf3b1	100	92.938	ENSOARG00000015374	SF3B1	100	92.938	Ovis_aries
ENSFHEG00000014333	sf3b1	100	92.938	ENSPPAG00000035007	SF3B1	100	92.938	Pan_paniscus
ENSFHEG00000014333	sf3b1	100	92.938	ENSPPRG00000009090	SF3B1	100	92.938	Panthera_pardus
ENSFHEG00000014333	sf3b1	100	92.938	ENSPTIG00000021557	SF3B1	100	92.938	Panthera_tigris_altaica
ENSFHEG00000014333	sf3b1	99	85.584	ENSPTRG00000012771	SF3B1	99	85.584	Pan_troglodytes
ENSFHEG00000014333	sf3b1	100	92.938	ENSPANG00000013417	SF3B1	100	92.938	Papio_anubis
ENSFHEG00000014333	sf3b1	100	95.068	ENSPKIG00000000784	sf3b1	100	95.068	Paramormyrops_kingsleyae
ENSFHEG00000014333	sf3b1	99	91.648	ENSPSIG00000017222	SF3B1	98	91.648	Pelodiscus_sinensis
ENSFHEG00000014333	sf3b1	91	96.641	ENSPMGG00000004330	sf3b1	99	96.641	Periophthalmus_magnuspinnatus
ENSFHEG00000014333	sf3b1	99	92.890	ENSPEMG00000010699	Sf3b1	100	92.890	Peromyscus_maniculatus_bairdii
ENSFHEG00000014333	sf3b1	100	88.435	ENSPMAG00000001311	sf3b1	100	88.738	Petromyzon_marinus
ENSFHEG00000014333	sf3b1	100	92.407	ENSPCIG00000010642	SF3B1	100	92.407	Phascolarctos_cinereus
ENSFHEG00000014333	sf3b1	100	98.328	ENSPFOG00000000073	sf3b1	100	98.328	Poecilia_formosa
ENSFHEG00000014333	sf3b1	100	98.327	ENSPLAG00000002293	sf3b1	100	98.327	Poecilia_latipinna
ENSFHEG00000014333	sf3b1	100	98.403	ENSPMEG00000000446	sf3b1	98	98.403	Poecilia_mexicana
ENSFHEG00000014333	sf3b1	100	98.403	ENSPREG00000019652	sf3b1	100	98.403	Poecilia_reticulata
ENSFHEG00000014333	sf3b1	100	97.045	ENSPPYG00000013044	SF3B1	100	97.045	Pongo_abelii
ENSFHEG00000014333	sf3b1	100	92.787	ENSPCAG00000009292	SF3B1	100	92.787	Procavia_capensis
ENSFHEG00000014333	sf3b1	100	92.938	ENSPCOG00000024074	SF3B1	100	92.938	Propithecus_coquereli
ENSFHEG00000014333	sf3b1	100	92.938	ENSPVAG00000008302	SF3B1	100	92.938	Pteropus_vampyrus
ENSFHEG00000014333	sf3b1	100	96.426	ENSPNYG00000014939	sf3b1	100	96.426	Pundamilia_nyererei
ENSFHEG00000014333	sf3b1	100	95.976	ENSPNAG00000008288	sf3b1	100	96.052	Pygocentrus_nattereri
ENSFHEG00000014333	sf3b1	100	92.938	ENSRNOG00000013516	Sf3b1	100	92.938	Rattus_norvegicus
ENSFHEG00000014333	sf3b1	99	89.202	ENSRBIG00000026096	SF3B1	100	89.202	Rhinopithecus_bieti
ENSFHEG00000014333	sf3b1	100	92.938	ENSRROG00000031308	SF3B1	100	92.938	Rhinopithecus_roxellana
ENSFHEG00000014333	sf3b1	100	92.938	ENSSBOG00000020080	SF3B1	100	92.938	Saimiri_boliviensis_boliviensis
ENSFHEG00000014333	sf3b1	100	92.407	ENSSHAG00000017564	SF3B1	100	92.407	Sarcophilus_harrisii
ENSFHEG00000014333	sf3b1	100	95.365	ENSSFOG00015021535	sf3b1	100	95.365	Scleropages_formosus
ENSFHEG00000014333	sf3b1	99	96.662	ENSSMAG00000013977	sf3b1	99	96.662	Scophthalmus_maximus
ENSFHEG00000014333	sf3b1	100	97.338	ENSSDUG00000017422	sf3b1	100	97.338	Seriola_dumerili
ENSFHEG00000014333	sf3b1	100	97.414	ENSSLDG00000019495	sf3b1	100	97.414	Seriola_lalandi_dorsalis
ENSFHEG00000014333	sf3b1	79	98.768	ENSSARG00000007016	SF3B1	75	98.768	Sorex_araneus
ENSFHEG00000014333	sf3b1	100	92.624	ENSSPUG00000000410	SF3B1	100	92.624	Sphenodon_punctatus
ENSFHEG00000014333	sf3b1	100	97.719	ENSSPAG00000010451	sf3b1	99	97.719	Stegastes_partitus
ENSFHEG00000014333	sf3b1	89	94.949	ENSSSCG00000016075	SF3B1	100	94.949	Sus_scrofa
ENSFHEG00000014333	sf3b1	100	93.004	ENSTGUG00000010553	SF3B1	100	93.004	Taeniopygia_guttata
ENSFHEG00000014333	sf3b1	100	96.806	ENSTRUG00000015534	sf3b1	100	96.806	Takifugu_rubripes
ENSFHEG00000014333	sf3b1	84	97.211	ENSTBEG00000008714	SF3B1	93	97.211	Tupaia_belangeri
ENSFHEG00000014333	sf3b1	92	93.300	ENSTTRG00000003414	SF3B1	92	93.300	Tursiops_truncatus
ENSFHEG00000014333	sf3b1	94	82.305	ENSUAMG00000018506	SF3B1	99	97.773	Ursus_americanus
ENSFHEG00000014333	sf3b1	100	92.938	ENSUMAG00000020945	SF3B1	100	92.938	Ursus_maritimus
ENSFHEG00000014333	sf3b1	95	93.366	ENSVPAG00000005798	SF3B1	96	93.366	Vicugna_pacos
ENSFHEG00000014333	sf3b1	100	92.938	ENSVVUG00000025948	SF3B1	95	92.938	Vulpes_vulpes
ENSFHEG00000014333	sf3b1	100	91.268	ENSXETG00000013339	sf3b1	100	91.268	Xenopus_tropicalis
ENSFHEG00000014333	sf3b1	100	93.764	ENSXCOG00000018086	sf3b1	100	94.068	Xiphophorus_couchianus
ENSFHEG00000014333	sf3b1	100	98.327	ENSXMAG00000007369	sf3b1	100	98.327	Xiphophorus_maculatus