EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000014647 (Gene tree)
Gene ID: 105920453
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 16026 bases
Position: chrKN806077.1:123041-139066
Accession: 105920453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000013161	zf-U11-48K	PF05253.12	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020646	-	1084	XM_021312603	ENSFHEP00000013161	288 (aa)	XP_021168278	UPI000644DD9C

Gene Model

Click here to download ENSFHEG00000014647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000014647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000014647	snrnp48	97	46.465	ENSG00000168566	SNRNP48	59	56.931	Homo_sapiens
ENSFHEG00000014647	snrnp48	95	79.121	ENSAPOG00000021430	snrnp48	65	80.717	Acanthochromis_polyacanthus
ENSFHEG00000014647	snrnp48	97	46.918	ENSAMEG00000017349	SNRNP48	58	53.960	Ailuropoda_melanoleuca
ENSFHEG00000014647	snrnp48	93	74.627	ENSACIG00000002032	snrnp48	60	77.228	Amphilophus_citrinellus
ENSFHEG00000014647	snrnp48	95	78.755	ENSAOCG00000010562	snrnp48	65	80.717	Amphiprion_ocellaris
ENSFHEG00000014647	snrnp48	95	78.022	ENSAPEG00000003231	snrnp48	60	84.653	Amphiprion_percula
ENSFHEG00000014647	snrnp48	94	80.741	ENSATEG00000020210	snrnp48	67	80.973	Anabas_testudineus
ENSFHEG00000014647	snrnp48	96	49.653	ENSACAG00000002811	SNRNP48	62	56.436	Anolis_carolinensis
ENSFHEG00000014647	snrnp48	97	46.465	ENSANAG00000033538	SNRNP48	59	56.931	Aotus_nancymaae
ENSFHEG00000014647	snrnp48	93	58.456	ENSAMXG00000015309	snrnp48	63	67.647	Astyanax_mexicanus
ENSFHEG00000014647	snrnp48	97	46.823	ENSBTAG00000001123	SNRNP48	59	53.695	Bos_taurus
ENSFHEG00000014647	snrnp48	97	46.465	ENSCJAG00000021330	SNRNP48	59	56.931	Callithrix_jacchus
ENSFHEG00000014647	snrnp48	97	48.421	ENSCAFG00020013203	SNRNP48	59	54.455	Canis_lupus_dingo
ENSFHEG00000014647	snrnp48	97	47.157	ENSCHIG00000015216	SNRNP48	59	54.680	Capra_hircus
ENSFHEG00000014647	snrnp48	97	45.455	ENSTSYG00000000698	SNRNP48	59	55.941	Carlito_syrichta
ENSFHEG00000014647	snrnp48	97	47.000	ENSCAPG00000006768	SNRNP48	65	55.446	Cavia_aperea
ENSFHEG00000014647	snrnp48	97	46.667	ENSCPOG00000007910	SNRNP48	59	55.446	Cavia_porcellus
ENSFHEG00000014647	snrnp48	97	46.128	ENSCCAG00000035652	SNRNP48	59	56.931	Cebus_capucinus
ENSFHEG00000014647	snrnp48	97	47.651	ENSCATG00000033947	SNRNP48	59	55.941	Cercocebus_atys
ENSFHEG00000014647	snrnp48	97	45.455	ENSCLAG00000003765	SNRNP48	59	55.941	Chinchilla_lanigera
ENSFHEG00000014647	snrnp48	97	46.465	ENSCSAG00000007409	SNRNP48	59	56.931	Chlorocebus_sabaeus
ENSFHEG00000014647	snrnp48	96	47.619	ENSCPBG00000019146	SNRNP48	63	55.446	Chrysemys_picta_bellii
ENSFHEG00000014647	snrnp48	93	30.986	ENSCING00000004121	-	61	30.918	Ciona_intestinalis
ENSFHEG00000014647	snrnp48	97	46.465	ENSCANG00000030017	SNRNP48	59	56.931	Colobus_angolensis_palliatus
ENSFHEG00000014647	snrnp48	97	46.465	ENSCGRG00001001076	-	59	55.665	Cricetulus_griseus_chok1gshd
ENSFHEG00000014647	snrnp48	89	42.146	ENSCGRG00001008805	-	61	47.291	Cricetulus_griseus_chok1gshd
ENSFHEG00000014647	snrnp48	97	46.465	ENSCGRG00000007781	Snrnp48	59	55.665	Cricetulus_griseus_crigri
ENSFHEG00000014647	snrnp48	73	78.095	ENSCSEG00000000722	snrnp48	58	78.325	Cynoglossus_semilaevis
ENSFHEG00000014647	snrnp48	88	78.049	ENSCVAG00000019829	snrnp48	57	89.238	Cyprinodon_variegatus
ENSFHEG00000014647	snrnp48	93	53.405	ENSDARG00000039989	snrnp48	59	61.084	Danio_rerio
ENSFHEG00000014647	snrnp48	97	44.781	ENSDNOG00000014978	SNRNP48	59	54.950	Dasypus_novemcinctus
ENSFHEG00000014647	snrnp48	97	45.455	ENSDORG00000015140	Snrnp48	59	53.465	Dipodomys_ordii
ENSFHEG00000014647	snrnp48	82	51.261	ENSEASG00005012021	SNRNP48	59	54.950	Equus_asinus_asinus
ENSFHEG00000014647	snrnp48	97	45.118	ENSECAG00000026937	SNRNP48	59	54.950	Equus_caballus
ENSFHEG00000014647	snrnp48	82	32.636	ENSEEUG00000015437	SNRNP48	59	33.990	Erinaceus_europaeus
ENSFHEG00000014647	snrnp48	87	60.305	ENSELUG00000009766	snrnp48	57	67.488	Esox_lucius
ENSFHEG00000014647	snrnp48	97	44.781	ENSFCAG00000018853	SNRNP48	59	54.455	Felis_catus
ENSFHEG00000014647	snrnp48	82	54.812	ENSFALG00000007797	SNRNP48	64	58.621	Ficedula_albicollis
ENSFHEG00000014647	snrnp48	97	46.128	ENSFDAG00000009231	SNRNP48	59	54.950	Fukomys_damarensis
ENSFHEG00000014647	snrnp48	90	66.296	ENSGMOG00000018599	-	65	76.733	Gadus_morhua
ENSFHEG00000014647	snrnp48	96	51.601	ENSGALG00000013005	SNRNP48	68	58.621	Gallus_gallus
ENSFHEG00000014647	snrnp48	95	83.755	ENSGAFG00000021639	snrnp48	59	90.594	Gambusia_affinis
ENSFHEG00000014647	snrnp48	70	82.178	ENSGACG00000017756	-	61	82.266	Gasterosteus_aculeatus
ENSFHEG00000014647	snrnp48	96	47.279	ENSGAGG00000000865	SNRNP48	66	54.950	Gopherus_agassizii
ENSFHEG00000014647	snrnp48	97	46.465	ENSGGOG00000013220	SNRNP48	59	56.931	Gorilla_gorilla
ENSFHEG00000014647	snrnp48	93	79.478	ENSHBUG00000017066	snrnp48	64	81.900	Haplochromis_burtoni
ENSFHEG00000014647	snrnp48	97	44.781	ENSHGLG00000015241	SNRNP48	59	54.455	Heterocephalus_glaber_female
ENSFHEG00000014647	snrnp48	97	44.781	ENSHGLG00100010027	SNRNP48	59	54.455	Heterocephalus_glaber_male
ENSFHEG00000014647	snrnp48	70	78.713	ENSHCOG00000014066	snrnp48	59	78.818	Hippocampus_comes
ENSFHEG00000014647	snrnp48	97	45.791	ENSSTOG00000014635	SNRNP48	59	55.941	Ictidomys_tridecemlineatus
ENSFHEG00000014647	snrnp48	82	51.261	ENSJJAG00000011495	Snrnp48	59	55.941	Jaculus_jaculus
ENSFHEG00000014647	snrnp48	95	79.853	ENSKMAG00000016514	snrnp48	66	84.071	Kryptolebias_marmoratus
ENSFHEG00000014647	snrnp48	79	77.293	ENSLBEG00000026249	snrnp48	60	81.773	Labrus_bergylta
ENSFHEG00000014647	snrnp48	92	51.254	ENSLACG00000003958	SNRNP48	60	56.098	Latimeria_chalumnae
ENSFHEG00000014647	snrnp48	83	61.667	ENSLOCG00000004187	snrnp48	60	65.686	Lepisosteus_oculatus
ENSFHEG00000014647	snrnp48	72	55.714	ENSLAFG00000011152	SNRNP48	59	55.665	Loxodonta_africana
ENSFHEG00000014647	snrnp48	97	46.465	ENSMFAG00000045216	SNRNP48	59	56.931	Macaca_fascicularis
ENSFHEG00000014647	snrnp48	97	46.465	ENSMMUG00000014785	SNRNP48	59	56.931	Macaca_mulatta
ENSFHEG00000014647	snrnp48	97	46.801	ENSMNEG00000042269	SNRNP48	59	57.426	Macaca_nemestrina
ENSFHEG00000014647	snrnp48	97	46.465	ENSMLEG00000034004	SNRNP48	59	56.931	Mandrillus_leucophaeus
ENSFHEG00000014647	snrnp48	95	78.832	ENSMAMG00000018673	snrnp48	53	84.236	Mastacembelus_armatus
ENSFHEG00000014647	snrnp48	97	48.197	ENSMGAG00000006037	SNRNP48	68	59.113	Meleagris_gallopavo
ENSFHEG00000014647	snrnp48	97	45.946	ENSMAUG00000011944	Snrnp48	60	55.446	Mesocricetus_auratus
ENSFHEG00000014647	snrnp48	97	45.638	ENSMICG00000012497	SNRNP48	59	55.941	Microcebus_murinus
ENSFHEG00000014647	snrnp48	97	46.801	ENSMOCG00000015555	Snrnp48	60	56.158	Microtus_ochrogaster
ENSFHEG00000014647	snrnp48	64	82.888	ENSMMOG00000003072	-	59	82.888	Mola_mola
ENSFHEG00000014647	snrnp48	82	51.261	ENSMODG00000009996	SNRNP48	54	53.465	Monodelphis_domestica
ENSFHEG00000014647	snrnp48	95	82.545	ENSMALG00000005725	snrnp48	66	83.036	Monopterus_albus
ENSFHEG00000014647	snrnp48	97	46.333	MGP_CAROLIEiJ_G0018441	Snrnp48	59	55.941	Mus_caroli
ENSFHEG00000014647	snrnp48	97	46.333	ENSMUSG00000021431	Snrnp48	59	55.941	Mus_musculus
ENSFHEG00000014647	snrnp48	97	47.000	MGP_PahariEiJ_G0019509	Snrnp48	59	56.436	Mus_pahari
ENSFHEG00000014647	snrnp48	97	46.000	MGP_SPRETEiJ_G0019321	Snrnp48	59	55.941	Mus_spretus
ENSFHEG00000014647	snrnp48	97	47.176	ENSNGAG00000004849	Snrnp48	59	57.214	Nannospalax_galili
ENSFHEG00000014647	snrnp48	93	79.478	ENSNBRG00000012127	snrnp48	65	81.448	Neolamprologus_brichardi
ENSFHEG00000014647	snrnp48	97	46.465	ENSNLEG00000011667	SNRNP48	59	56.931	Nomascus_leucogenys
ENSFHEG00000014647	snrnp48	80	51.931	ENSOPRG00000015471	SNRNP48	62	54.950	Ochotona_princeps
ENSFHEG00000014647	snrnp48	93	80.224	ENSONIG00000001520	snrnp48	65	82.353	Oreochromis_niloticus
ENSFHEG00000014647	snrnp48	82	51.681	ENSOCUG00000005168	SNRNP48	66	55.446	Oryctolagus_cuniculus
ENSFHEG00000014647	snrnp48	86	80.723	ENSORLG00000015654	snrnp48	65	80.973	Oryzias_latipes
ENSFHEG00000014647	snrnp48	86	78.715	ENSORLG00020015976	snrnp48	55	79.646	Oryzias_latipes_hni
ENSFHEG00000014647	snrnp48	86	78.715	ENSORLG00015022379	snrnp48	55	79.646	Oryzias_latipes_hsok
ENSFHEG00000014647	snrnp48	93	80.297	ENSOMEG00000022007	snrnp48	65	80.973	Oryzias_melastigma
ENSFHEG00000014647	snrnp48	82	51.883	ENSOGAG00000005275	SNRNP48	61	55.665	Otolemur_garnettii
ENSFHEG00000014647	snrnp48	97	46.488	ENSOARG00000017319	SNRNP48	70	55.172	Ovis_aries
ENSFHEG00000014647	snrnp48	97	46.465	ENSPPAG00000032873	SNRNP48	59	56.931	Pan_paniscus
ENSFHEG00000014647	snrnp48	97	44.781	ENSPPRG00000004283	SNRNP48	59	54.455	Panthera_pardus
ENSFHEG00000014647	snrnp48	97	44.781	ENSPTIG00000013502	SNRNP48	70	54.455	Panthera_tigris_altaica
ENSFHEG00000014647	snrnp48	97	46.465	ENSPTRG00000017703	SNRNP48	59	56.931	Pan_troglodytes
ENSFHEG00000014647	snrnp48	97	46.465	ENSPANG00000000771	SNRNP48	59	56.931	Papio_anubis
ENSFHEG00000014647	snrnp48	91	47.670	ENSPSIG00000002213	SNRNP48	64	55.610	Pelodiscus_sinensis
ENSFHEG00000014647	snrnp48	76	71.111	ENSPMGG00000008120	snrnp48	71	75.610	Periophthalmus_magnuspinnatus
ENSFHEG00000014647	snrnp48	97	47.297	ENSPEMG00000008872	Snrnp48	59	56.931	Peromyscus_maniculatus_bairdii
ENSFHEG00000014647	snrnp48	95	85.921	ENSPFOG00000003578	snrnp48	64	88.341	Poecilia_formosa
ENSFHEG00000014647	snrnp48	64	92.391	ENSPLAG00000002290	snrnp48	64	92.391	Poecilia_latipinna
ENSFHEG00000014647	snrnp48	95	85.560	ENSPMEG00000018033	snrnp48	64	87.892	Poecilia_mexicana
ENSFHEG00000014647	snrnp48	95	85.921	ENSPREG00000018541	snrnp48	64	87.892	Poecilia_reticulata
ENSFHEG00000014647	snrnp48	97	45.791	ENSPPYG00000016209	SNRNP48	59	55.941	Pongo_abelii
ENSFHEG00000014647	snrnp48	72	41.315	ENSPCAG00000011991	SNRNP48	75	42.079	Procavia_capensis
ENSFHEG00000014647	snrnp48	97	44.595	ENSPVAG00000002854	SNRNP48	59	54.229	Pteropus_vampyrus
ENSFHEG00000014647	snrnp48	91	79.468	ENSPNYG00000015399	snrnp48	71	81.448	Pundamilia_nyererei
ENSFHEG00000014647	snrnp48	97	47.667	ENSRNOG00000013756	Snrnp48	59	56.931	Rattus_norvegicus
ENSFHEG00000014647	snrnp48	82	52.941	ENSRBIG00000043856	SNRNP48	63	56.931	Rhinopithecus_bieti
ENSFHEG00000014647	snrnp48	97	46.465	ENSRROG00000043229	SNRNP48	59	56.931	Rhinopithecus_roxellana
ENSFHEG00000014647	snrnp48	97	46.801	ENSSBOG00000019486	SNRNP48	59	57.426	Saimiri_boliviensis_boliviensis
ENSFHEG00000014647	snrnp48	82	51.261	ENSSHAG00000014483	SNRNP48	57	53.465	Sarcophilus_harrisii
ENSFHEG00000014647	snrnp48	95	80.292	ENSSDUG00000014953	snrnp48	66	81.057	Seriola_dumerili
ENSFHEG00000014647	snrnp48	95	79.927	ENSSLDG00000005989	snrnp48	65	81.333	Seriola_lalandi_dorsalis
ENSFHEG00000014647	snrnp48	88	51.685	ENSSPUG00000006257	SNRNP48	57	55.941	Sphenodon_punctatus
ENSFHEG00000014647	snrnp48	95	81.387	ENSSPAG00000006454	snrnp48	65	83.408	Stegastes_partitus
ENSFHEG00000014647	snrnp48	90	49.466	ENSTGUG00000007575	SNRNP48	64	58.416	Taeniopygia_guttata
ENSFHEG00000014647	snrnp48	94	67.636	ENSTRUG00000007031	snrnp48	61	78.922	Takifugu_rubripes
ENSFHEG00000014647	snrnp48	100	67.931	ENSTNIG00000012977	-	62	76.961	Tetraodon_nigroviridis
ENSFHEG00000014647	snrnp48	72	54.067	ENSTBEG00000015620	SNRNP48	59	53.960	Tupaia_belangeri
ENSFHEG00000014647	snrnp48	97	45.638	ENSTTRG00000016715	SNRNP48	59	53.960	Tursiops_truncatus
ENSFHEG00000014647	snrnp48	97	48.070	ENSUAMG00000003690	SNRNP48	59	53.960	Ursus_americanus
ENSFHEG00000014647	snrnp48	82	51.046	ENSVPAG00000003557	SNRNP48	70	54.187	Vicugna_pacos
ENSFHEG00000014647	snrnp48	97	48.421	ENSVVUG00000004996	SNRNP48	59	54.455	Vulpes_vulpes
ENSFHEG00000014647	snrnp48	86	49.035	ENSXETG00000020447	snrnp48	60	52.913	Xenopus_tropicalis
ENSFHEG00000014647	snrnp48	95	72.924	ENSXCOG00000004478	snrnp48	57	90.270	Xiphophorus_couchianus
ENSFHEG00000014647	snrnp48	95	84.838	ENSXMAG00000013595	snrnp48	64	86.547	Xiphophorus_maculatus