EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000014820 (Gene tree)
Gene ID: 105929800
Gene Symbol: scrt1b
Alias: zgc:113646
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 14400 bases
Position: chrKN805582.1:379418-393817
Accession: 105929800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000029873	zf-C2H2	PF00096.26	1.8e-25	1	4
ENSFHEP00000029873	zf-C2H2	PF00096.26	1.8e-25	2	4
ENSFHEP00000029873	zf-C2H2	PF00096.26	1.8e-25	3	4
ENSFHEP00000029873	zf-C2H2	PF00096.26	1.8e-25	4	4
ENSFHEP00000029873	zf-met	PF12874.7	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020853	-	843	XM_012867711	ENSFHEP00000029873	280 (aa)	XP_012723165	UPI000644AA71

Gene Model

Click here to download ENSFHEG00000014820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000014820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000014820	scrt1b	50	55.714	ENSFHEG00000012561	snai2	98	38.768
ENSFHEG00000014820	scrt1b	96	71.014	ENSFHEG00000005732	scrt2	96	71.014
ENSFHEG00000014820	scrt1b	99	76.333	ENSFHEG00000009794	-	99	76.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000014820	scrt1b	99	77.622	ENSAPOG00000015197	-	99	77.622	Acanthochromis_polyacanthus
ENSFHEG00000014820	scrt1b	100	97.857	ENSAPOG00000009279	scrt1b	100	97.857	Acanthochromis_polyacanthus
ENSFHEG00000014820	scrt1b	96	69.928	ENSAPOG00000003680	scrt2	96	69.928	Acanthochromis_polyacanthus
ENSFHEG00000014820	scrt1b	100	94.286	ENSACIG00000013613	scrt1b	100	94.286	Amphilophus_citrinellus
ENSFHEG00000014820	scrt1b	99	76.333	ENSACIG00000006586	-	99	76.333	Amphilophus_citrinellus
ENSFHEG00000014820	scrt1b	96	68.841	ENSACIG00000012604	scrt2	96	68.841	Amphilophus_citrinellus
ENSFHEG00000014820	scrt1b	96	57.475	ENSACIG00000001296	-	96	56.954	Amphilophus_citrinellus
ENSFHEG00000014820	scrt1b	99	76.000	ENSAOCG00000023304	-	99	76.000	Amphiprion_ocellaris
ENSFHEG00000014820	scrt1b	100	97.857	ENSAOCG00000003910	scrt1b	100	97.857	Amphiprion_ocellaris
ENSFHEG00000014820	scrt1b	96	69.928	ENSAOCG00000021557	scrt2	96	69.928	Amphiprion_ocellaris
ENSFHEG00000014820	scrt1b	96	69.928	ENSAPEG00000022558	scrt2	96	69.928	Amphiprion_percula
ENSFHEG00000014820	scrt1b	100	98.214	ENSAPEG00000000869	scrt1b	100	98.214	Amphiprion_percula
ENSFHEG00000014820	scrt1b	99	76.000	ENSAPEG00000005677	-	99	76.000	Amphiprion_percula
ENSFHEG00000014820	scrt1b	99	77.273	ENSATEG00000011660	-	99	77.273	Anabas_testudineus
ENSFHEG00000014820	scrt1b	96	54.633	ENSATEG00000003195	-	97	54.633	Anabas_testudineus
ENSFHEG00000014820	scrt1b	96	64.401	ENSATEG00000023998	scrt2	97	64.401	Anabas_testudineus
ENSFHEG00000014820	scrt1b	100	96.429	ENSATEG00000002302	scrt1b	100	96.429	Anabas_testudineus
ENSFHEG00000014820	scrt1b	76	76.995	ENSACAG00000016109	SCRT2	95	76.995	Anolis_carolinensis
ENSFHEG00000014820	scrt1b	99	73.597	ENSACLG00000012046	-	99	73.597	Astatotilapia_calliptera
ENSFHEG00000014820	scrt1b	100	97.500	ENSACLG00000007162	scrt1b	100	97.500	Astatotilapia_calliptera
ENSFHEG00000014820	scrt1b	83	74.059	ENSAMXG00000034158	scrt2	87	74.059	Astyanax_mexicanus
ENSFHEG00000014820	scrt1b	100	83.214	ENSAMXG00000038085	scrt1a	100	84.342	Astyanax_mexicanus
ENSFHEG00000014820	scrt1b	98	82.734	ENSAMXG00000042624	SCRT1	99	82.734	Astyanax_mexicanus
ENSFHEG00000014820	scrt1b	58	62.346	WBGene00000468	ces-1	60	61.585	Caenorhabditis_elegans
ENSFHEG00000014820	scrt1b	99	83.214	ENSCPBG00000018899	SCRT1	99	83.214	Chrysemys_picta_bellii
ENSFHEG00000014820	scrt1b	86	61.355	ENSCPBG00000027613	SCRT2	100	61.355	Chrysemys_picta_bellii
ENSFHEG00000014820	scrt1b	98	76.094	ENSCSEG00000014892	-	98	76.094	Cynoglossus_semilaevis
ENSFHEG00000014820	scrt1b	100	96.429	ENSCSEG00000008596	scrt1b	100	96.429	Cynoglossus_semilaevis
ENSFHEG00000014820	scrt1b	96	66.337	ENSCSEG00000021542	scrt2	96	66.337	Cynoglossus_semilaevis
ENSFHEG00000014820	scrt1b	99	76.000	ENSCVAG00000003190	-	99	76.000	Cyprinodon_variegatus
ENSFHEG00000014820	scrt1b	100	98.214	ENSCVAG00000009561	scrt1b	100	98.214	Cyprinodon_variegatus
ENSFHEG00000014820	scrt1b	96	64.078	ENSCVAG00000021038	scrt2	97	64.078	Cyprinodon_variegatus
ENSFHEG00000014820	scrt1b	100	86.477	ENSDARG00000100821	scrt1a	100	86.477	Danio_rerio
ENSFHEG00000014820	scrt1b	100	86.477	ENSDARG00000040214	scrt1b	100	86.477	Danio_rerio
ENSFHEG00000014820	scrt1b	97	66.667	ENSELUG00000023883	scrt2	96	66.667	Esox_lucius
ENSFHEG00000014820	scrt1b	99	86.786	ENSELUG00000022228	scrt1a	99	86.786	Esox_lucius
ENSFHEG00000014820	scrt1b	99	88.129	ENSELUG00000005435	scrt1b	99	88.129	Esox_lucius
ENSFHEG00000014820	scrt1b	82	71.861	ENSFALG00000005718	SCRT2	96	71.861	Ficedula_albicollis
ENSFHEG00000014820	scrt1b	96	62.362	ENSFDAG00000008733	SCRT1	97	62.362	Fukomys_damarensis
ENSFHEG00000014820	scrt1b	96	60.841	ENSGMOG00000019519	scrt2	95	60.841	Gadus_morhua
ENSFHEG00000014820	scrt1b	99	92.832	ENSGMOG00000000629	scrt1b	100	92.832	Gadus_morhua
ENSFHEG00000014820	scrt1b	96	65.201	ENSGALG00000028912	SCRT2	97	65.201	Gallus_gallus
ENSFHEG00000014820	scrt1b	100	98.571	ENSGAFG00000007636	scrt1b	100	98.571	Gambusia_affinis
ENSFHEG00000014820	scrt1b	99	77.305	ENSGAFG00000009650	-	99	77.305	Gambusia_affinis
ENSFHEG00000014820	scrt1b	96	67.677	ENSGAFG00000003093	scrt2	96	67.677	Gambusia_affinis
ENSFHEG00000014820	scrt1b	99	74.324	ENSGACG00000004072	-	99	74.324	Gasterosteus_aculeatus
ENSFHEG00000014820	scrt1b	99	94.265	ENSGACG00000008982	scrt1b	99	94.265	Gasterosteus_aculeatus
ENSFHEG00000014820	scrt1b	99	84.173	ENSGAGG00000011736	SCRT1	100	84.173	Gopherus_agassizii
ENSFHEG00000014820	scrt1b	65	79.459	ENSGAGG00000020760	-	71	79.459	Gopherus_agassizii
ENSFHEG00000014820	scrt1b	96	64.706	ENSGAGG00000020761	SCRT2	96	64.706	Gopherus_agassizii
ENSFHEG00000014820	scrt1b	100	97.500	ENSHBUG00000016621	scrt1b	100	97.500	Haplochromis_burtoni
ENSFHEG00000014820	scrt1b	96	69.928	ENSHBUG00000012492	scrt2	96	69.928	Haplochromis_burtoni
ENSFHEG00000014820	scrt1b	99	76.000	ENSHBUG00000019101	-	99	76.000	Haplochromis_burtoni
ENSFHEG00000014820	scrt1b	99	68.966	ENSHCOG00000016179	-	99	68.966	Hippocampus_comes
ENSFHEG00000014820	scrt1b	100	95.000	ENSHCOG00000016704	scrt1b	100	95.000	Hippocampus_comes
ENSFHEG00000014820	scrt1b	96	66.667	ENSHCOG00000008116	scrt2	96	66.667	Hippocampus_comes
ENSFHEG00000014820	scrt1b	98	79.273	ENSIPUG00000005547	-	99	79.273	Ictalurus_punctatus
ENSFHEG00000014820	scrt1b	99	86.022	ENSIPUG00000004551	scrt1a	99	86.022	Ictalurus_punctatus
ENSFHEG00000014820	scrt1b	50	85.106	ENSSTOG00000032944	SCRT2	84	80.255	Ictidomys_tridecemlineatus
ENSFHEG00000014820	scrt1b	100	99.286	ENSKMAG00000005484	scrt1b	100	99.286	Kryptolebias_marmoratus
ENSFHEG00000014820	scrt1b	99	74.333	ENSKMAG00000009489	-	99	76.000	Kryptolebias_marmoratus
ENSFHEG00000014820	scrt1b	96	64.725	ENSKMAG00000018087	scrt2	97	64.725	Kryptolebias_marmoratus
ENSFHEG00000014820	scrt1b	99	74.161	ENSLBEG00000023388	-	99	74.832	Labrus_bergylta
ENSFHEG00000014820	scrt1b	96	63.871	ENSLBEG00000015419	scrt2	97	63.871	Labrus_bergylta
ENSFHEG00000014820	scrt1b	100	84.342	ENSLACG00000003588	SCRT1	99	84.342	Latimeria_chalumnae
ENSFHEG00000014820	scrt1b	100	88.612	ENSLOCG00000007573	scrt1b	100	88.612	Lepisosteus_oculatus
ENSFHEG00000014820	scrt1b	96	55.340	ENSLOCG00000002246	scrt2	97	55.449	Lepisosteus_oculatus
ENSFHEG00000014820	scrt1b	96	94.074	ENSMFAG00000035496	SCRT1	78	82.036	Macaca_fascicularis
ENSFHEG00000014820	scrt1b	100	97.500	ENSMAMG00000011698	scrt1b	100	97.500	Mastacembelus_armatus
ENSFHEG00000014820	scrt1b	96	64.725	ENSMAMG00000001291	scrt2	97	64.078	Mastacembelus_armatus
ENSFHEG00000014820	scrt1b	96	69.928	ENSMZEG00005026445	scrt2	96	69.928	Maylandia_zebra
ENSFHEG00000014820	scrt1b	99	76.000	ENSMZEG00005026702	-	99	76.000	Maylandia_zebra
ENSFHEG00000014820	scrt1b	100	97.500	ENSMZEG00005005627	scrt1b	100	97.500	Maylandia_zebra
ENSFHEG00000014820	scrt1b	83	70.130	ENSMGAG00000016579	SCRT2	96	70.435	Meleagris_gallopavo
ENSFHEG00000014820	scrt1b	99	76.000	ENSMMOG00000018345	-	99	76.000	Mola_mola
ENSFHEG00000014820	scrt1b	100	95.357	ENSMMOG00000003327	scrt1b	100	95.357	Mola_mola
ENSFHEG00000014820	scrt1b	96	65.033	ENSMMOG00000009272	scrt2	97	65.359	Mola_mola
ENSFHEG00000014820	scrt1b	100	97.500	ENSMALG00000012704	scrt1b	100	97.500	Monopterus_albus
ENSFHEG00000014820	scrt1b	96	69.176	ENSMALG00000013656	scrt2	96	69.176	Monopterus_albus
ENSFHEG00000014820	scrt1b	64	69.565	ENSNGAG00000020815	Scrt2	93	68.041	Nannospalax_galili
ENSFHEG00000014820	scrt1b	96	69.565	ENSNBRG00000007221	scrt2	96	69.565	Neolamprologus_brichardi
ENSFHEG00000014820	scrt1b	99	75.667	ENSNBRG00000014882	-	99	75.667	Neolamprologus_brichardi
ENSFHEG00000014820	scrt1b	100	92.143	ENSNBRG00000013983	scrt1b	100	92.143	Neolamprologus_brichardi
ENSFHEG00000014820	scrt1b	96	72.222	ENSONIG00000019809	-	99	72.222	Oreochromis_niloticus
ENSFHEG00000014820	scrt1b	96	61.871	ENSONIG00000003152	-	96	61.871	Oreochromis_niloticus
ENSFHEG00000014820	scrt1b	100	97.500	ENSONIG00000006007	scrt1b	100	97.500	Oreochromis_niloticus
ENSFHEG00000014820	scrt1b	96	64.401	ENSONIG00000016758	scrt2	97	64.401	Oreochromis_niloticus
ENSFHEG00000014820	scrt1b	100	96.429	ENSORLG00000025651	scrt1b	100	96.429	Oryzias_latipes
ENSFHEG00000014820	scrt1b	96	64.725	ENSORLG00000024051	scrt2	97	64.725	Oryzias_latipes
ENSFHEG00000014820	scrt1b	99	73.754	ENSORLG00000022825	-	99	73.754	Oryzias_latipes
ENSFHEG00000014820	scrt1b	96	64.725	ENSORLG00020011478	scrt2	97	64.725	Oryzias_latipes_hni
ENSFHEG00000014820	scrt1b	100	96.429	ENSORLG00020012967	scrt1b	100	96.429	Oryzias_latipes_hni
ENSFHEG00000014820	scrt1b	99	75.083	ENSORLG00015010104	-	99	75.083	Oryzias_latipes_hsok
ENSFHEG00000014820	scrt1b	96	64.725	ENSORLG00015005524	scrt2	97	64.725	Oryzias_latipes_hsok
ENSFHEG00000014820	scrt1b	100	96.429	ENSORLG00015019165	scrt1b	100	96.429	Oryzias_latipes_hsok
ENSFHEG00000014820	scrt1b	99	75.920	ENSOMEG00000000286	-	99	75.920	Oryzias_melastigma
ENSFHEG00000014820	scrt1b	100	96.429	ENSOMEG00000003925	scrt1b	100	96.429	Oryzias_melastigma
ENSFHEG00000014820	scrt1b	96	65.049	ENSOMEG00000002661	scrt2	97	65.049	Oryzias_melastigma
ENSFHEG00000014820	scrt1b	100	85.765	ENSPKIG00000020085	scrt1a	100	85.765	Paramormyrops_kingsleyae
ENSFHEG00000014820	scrt1b	100	87.189	ENSPKIG00000022303	SCRT1	100	87.189	Paramormyrops_kingsleyae
ENSFHEG00000014820	scrt1b	96	70.036	ENSPMGG00000016561	scrt2	96	70.036	Periophthalmus_magnuspinnatus
ENSFHEG00000014820	scrt1b	99	74.237	ENSPMGG00000021402	-	99	74.237	Periophthalmus_magnuspinnatus
ENSFHEG00000014820	scrt1b	100	92.143	ENSPMGG00000002260	scrt1b	100	92.143	Periophthalmus_magnuspinnatus
ENSFHEG00000014820	scrt1b	96	64.401	ENSPFOG00000007738	scrt2	97	64.401	Poecilia_formosa
ENSFHEG00000014820	scrt1b	100	98.571	ENSPFOG00000017719	scrt1b	100	98.571	Poecilia_formosa
ENSFHEG00000014820	scrt1b	99	76.094	ENSPFOG00000005616	-	99	76.094	Poecilia_formosa
ENSFHEG00000014820	scrt1b	100	98.571	ENSPLAG00000009876	scrt1b	100	98.571	Poecilia_latipinna
ENSFHEG00000014820	scrt1b	99	76.094	ENSPLAG00000011718	-	99	76.094	Poecilia_latipinna
ENSFHEG00000014820	scrt1b	96	71.119	ENSPLAG00000005765	scrt2	96	71.119	Poecilia_latipinna
ENSFHEG00000014820	scrt1b	96	71.119	ENSPMEG00000001538	scrt2	96	71.119	Poecilia_mexicana
ENSFHEG00000014820	scrt1b	99	76.094	ENSPMEG00000011706	-	99	76.094	Poecilia_mexicana
ENSFHEG00000014820	scrt1b	100	98.571	ENSPMEG00000013274	scrt1b	100	98.571	Poecilia_mexicana
ENSFHEG00000014820	scrt1b	99	75.421	ENSPREG00000012166	-	99	75.421	Poecilia_reticulata
ENSFHEG00000014820	scrt1b	96	64.401	ENSPREG00000001147	scrt2	97	64.401	Poecilia_reticulata
ENSFHEG00000014820	scrt1b	100	98.571	ENSPREG00000018985	scrt1b	100	98.571	Poecilia_reticulata
ENSFHEG00000014820	scrt1b	99	76.000	ENSPNYG00000008865	-	99	76.000	Pundamilia_nyererei
ENSFHEG00000014820	scrt1b	100	97.500	ENSPNYG00000017733	scrt1b	100	97.500	Pundamilia_nyererei
ENSFHEG00000014820	scrt1b	96	69.928	ENSPNYG00000013109	scrt2	96	69.928	Pundamilia_nyererei
ENSFHEG00000014820	scrt1b	98	84.477	ENSPNAG00000027880	-	99	84.477	Pygocentrus_nattereri
ENSFHEG00000014820	scrt1b	100	85.409	ENSPNAG00000017415	scrt1a	100	85.409	Pygocentrus_nattereri
ENSFHEG00000014820	scrt1b	100	86.121	ENSSFOG00015001195	SCRT1	100	86.121	Scleropages_formosus
ENSFHEG00000014820	scrt1b	99	74.503	ENSSMAG00000005122	-	99	74.503	Scophthalmus_maximus
ENSFHEG00000014820	scrt1b	99	96.416	ENSSMAG00000019207	scrt1b	99	96.416	Scophthalmus_maximus
ENSFHEG00000014820	scrt1b	99	77.000	ENSSDUG00000013215	-	99	77.000	Seriola_dumerili
ENSFHEG00000014820	scrt1b	100	98.571	ENSSDUG00000007752	scrt1b	100	98.571	Seriola_dumerili
ENSFHEG00000014820	scrt1b	98	64.901	ENSSDUG00000001637	scrt2	96	65.436	Seriola_dumerili
ENSFHEG00000014820	scrt1b	96	63.578	ENSSLDG00000013565	scrt2	97	64.078	Seriola_lalandi_dorsalis
ENSFHEG00000014820	scrt1b	100	98.571	ENSSLDG00000017166	scrt1b	100	98.571	Seriola_lalandi_dorsalis
ENSFHEG00000014820	scrt1b	99	77.000	ENSSLDG00000016454	-	99	77.000	Seriola_lalandi_dorsalis
ENSFHEG00000014820	scrt1b	96	66.052	ENSSPUG00000018637	SCRT2	97	66.052	Sphenodon_punctatus
ENSFHEG00000014820	scrt1b	99	74.667	ENSSPAG00000006788	-	99	76.333	Stegastes_partitus
ENSFHEG00000014820	scrt1b	100	98.571	ENSSPAG00000002200	scrt1b	100	98.571	Stegastes_partitus
ENSFHEG00000014820	scrt1b	96	70.290	ENSSPAG00000014018	scrt2	96	70.290	Stegastes_partitus
ENSFHEG00000014820	scrt1b	82	71.739	ENSTGUG00000006801	SCRT2	99	71.739	Taeniopygia_guttata
ENSFHEG00000014820	scrt1b	96	67.698	ENSTRUG00000007620	scrt2	96	67.698	Takifugu_rubripes
ENSFHEG00000014820	scrt1b	86	77.500	ENSTRUG00000019558	-	81	77.500	Takifugu_rubripes
ENSFHEG00000014820	scrt1b	99	74.832	ENSTRUG00000012719	-	99	74.832	Takifugu_rubripes
ENSFHEG00000014820	scrt1b	98	95.636	ENSTRUG00000011637	scrt1b	99	95.636	Takifugu_rubripes
ENSFHEG00000014820	scrt1b	100	95.714	ENSTNIG00000018384	scrt1b	100	95.714	Tetraodon_nigroviridis
ENSFHEG00000014820	scrt1b	96	70.609	ENSTNIG00000012473	scrt2	97	70.609	Tetraodon_nigroviridis
ENSFHEG00000014820	scrt1b	99	75.887	ENSXCOG00000019861	-	99	75.887	Xiphophorus_couchianus
ENSFHEG00000014820	scrt1b	100	98.214	ENSXCOG00000019675	scrt1b	100	98.214	Xiphophorus_couchianus
ENSFHEG00000014820	scrt1b	96	68.013	ENSXCOG00000014367	scrt2	96	68.013	Xiphophorus_couchianus
ENSFHEG00000014820	scrt1b	99	75.758	ENSXMAG00000015353	-	99	75.758	Xiphophorus_maculatus
ENSFHEG00000014820	scrt1b	96	64.725	ENSXMAG00000028567	scrt2	97	64.725	Xiphophorus_maculatus
ENSFHEG00000014820	scrt1b	100	98.214	ENSXMAG00000027885	scrt1b	100	98.214	Xiphophorus_maculatus