EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015054 (Gene tree)
Gene ID: 105923754
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15553 bases
Position: chrKN805553.1:249771-265323
Accession: 105923754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000013517	GTP_EFTU	PF00009.27	1e-53	1	1
ENSFHEP00000013475	GTP_EFTU	PF00009.27	1.1e-53	1	1
ENSFHEP00000013506	GTP_EFTU	PF00009.27	1.3e-53	1	1
ENSFHEP00000013508	GTP_EFTU	PF00009.27	1.3e-53	1	1
ENSFHEP00000013522	GTP_EFTU	PF00009.27	1.8e-53	1	1
ENSFHEP00000029966	GTP_EFTU	PF00009.27	2.9e-27	1	2
ENSFHEP00000029966	GTP_EFTU	PF00009.27	2.9e-27	2	2
ENSFHEP00000013475	GTP_EFTU_D2	PF03144.25	8.1e-15	1	1
ENSFHEP00000013506	GTP_EFTU_D2	PF03144.25	9.1e-15	1	1
ENSFHEP00000013517	GTP_EFTU_D2	PF03144.25	7.7e-14	1	1
ENSFHEP00000013508	GTP_EFTU_D2	PF03144.25	7.7e-14	1	1
ENSFHEP00000013522	GTP_EFTU_D2	PF03144.25	9.1e-14	1	1
ENSFHEP00000029966	GTP_EFTU_D2	PF03144.25	9.7e-14	1	1
ENSFHEP00000013475	GTP_EFTU_D3	PF03143.17	2.7e-42	1	1
ENSFHEP00000013506	GTP_EFTU_D3	PF03143.17	3.6e-41	1	1
ENSFHEP00000029966	GTP_EFTU_D3	PF03143.17	1.6e-40	1	1
ENSFHEP00000013522	GTP_EFTU_D3	PF03143.17	2e-40	1	1
ENSFHEP00000013517	GTP_EFTU_D3	PF03143.17	2.1e-40	1	1
ENSFHEP00000013508	GTP_EFTU_D3	PF03143.17	2.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000032409	-	1308	-	ENSFHEP00000029966	435 (aa)	-	-
ENSFHET00000021029	-	3494	XM_012859705	ENSFHEP00000013475	461 (aa)	XP_012715159	UPI000644CB10
ENSFHET00000032417	-	3426	-	ENSFHEP00000013522	462 (aa)	-	-
ENSFHET00000032414	-	3426	-	ENSFHEP00000013508	462 (aa)	-	-
ENSFHET00000021062	-	3426	-	ENSFHEP00000013506	462 (aa)	-	-
ENSFHET00000021089	-	3426	-	ENSFHEP00000013517	462 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000015054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015054	-	100	89.827	ENSFHEG00000005331	EEF1A1	100	89.827
ENSFHEG00000015054	-	99	69.956	ENSFHEG00000017452	si:dkey-37o8.1	99	69.956
ENSFHEG00000015054	-	95	43.021	ENSFHEG00000006942	hbs1l	66	43.021
ENSFHEG00000015054	-	95	39.408	ENSFHEG00000009090	gspt1l	76	39.408
ENSFHEG00000015054	-	100	89.827	ENSFHEG00000011259	eef1a1b	100	89.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015054	-	100	94.577	ENSAPOG00000004714	-	100	94.577	Acanthochromis_polyacanthus
ENSFHEG00000015054	-	90	95.157	ENSACIG00000001219	-	97	95.285	Amphilophus_citrinellus
ENSFHEG00000015054	-	100	91.558	ENSAOCG00000022039	-	100	91.558	Amphiprion_ocellaris
ENSFHEG00000015054	-	87	96.278	ENSAOCG00000022002	-	98	96.278	Amphiprion_ocellaris
ENSFHEG00000015054	-	100	91.323	ENSAPEG00000016361	-	100	91.126	Amphiprion_percula
ENSFHEG00000015054	-	100	96.312	ENSATEG00000003244	-	97	96.312	Anabas_testudineus
ENSFHEG00000015054	-	100	95.011	ENSACLG00000022560	-	98	95.122	Astatotilapia_calliptera
ENSFHEG00000015054	-	100	84.416	WBGene00001169	eef-1A.2	99	84.416	Caenorhabditis_elegans
ENSFHEG00000015054	-	100	84.416	WBGene00001168	eef-1A.1	99	84.416	Caenorhabditis_elegans
ENSFHEG00000015054	-	98	81.360	ENSCING00000005126	-	100	81.330	Ciona_intestinalis
ENSFHEG00000015054	-	100	80.472	ENSCING00000007703	-	99	80.472	Ciona_intestinalis
ENSFHEG00000015054	-	98	81.057	ENSCING00000018894	-	99	81.034	Ciona_intestinalis
ENSFHEG00000015054	-	99	84.532	ENSCING00000021478	-	99	84.532	Ciona_intestinalis
ENSFHEG00000015054	-	99	76.688	ENSCSAVG00000001085	-	91	76.688	Ciona_savignyi
ENSFHEG00000015054	-	98	83.516	ENSCSAVG00000009663	-	100	83.441	Ciona_savignyi
ENSFHEG00000015054	-	99	84.716	ENSCSAVG00000006357	-	98	94.000	Ciona_savignyi
ENSFHEG00000015054	-	98	81.046	ENSCSAVG00000003196	-	100	81.023	Ciona_savignyi
ENSFHEG00000015054	-	98	94.678	ENSCSEG00000008011	-	98	94.678	Cynoglossus_semilaevis
ENSFHEG00000015054	-	90	87.923	ENSCSEG00000007972	-	100	87.923	Cynoglossus_semilaevis
ENSFHEG00000015054	-	89	87.167	ENSCSEG00000007992	-	99	87.167	Cynoglossus_semilaevis
ENSFHEG00000015054	-	100	99.132	ENSCVAG00000019356	-	100	99.132	Cyprinodon_variegatus
ENSFHEG00000015054	-	98	86.947	FBgn0000557	eEF1alpha2	100	86.580	Drosophila_melanogaster
ENSFHEG00000015054	-	100	86.580	FBgn0284245	eEF1alpha1	99	86.580	Drosophila_melanogaster
ENSFHEG00000015054	-	99	84.599	ENSEBUG00000015814	-	100	84.599	Eptatretus_burgeri
ENSFHEG00000015054	-	100	97.831	ENSGAFG00000014646	-	100	97.831	Gambusia_affinis
ENSFHEG00000015054	-	100	93.709	ENSGACG00000002143	-	98	94.013	Gasterosteus_aculeatus
ENSFHEG00000015054	-	98	95.344	ENSGACG00000002182	-	98	95.344	Gasterosteus_aculeatus
ENSFHEG00000015054	-	55	92.857	ENSHBUG00000017166	-	91	92.975	Haplochromis_burtoni
ENSFHEG00000015054	-	98	95.565	ENSHCOG00000008468	-	98	95.565	Hippocampus_comes
ENSFHEG00000015054	-	99	86.117	ENSHCOG00000008489	-	100	86.117	Hippocampus_comes
ENSFHEG00000015054	-	98	95.122	ENSLBEG00000002759	-	98	95.122	Labrus_bergylta
ENSFHEG00000015054	-	99	85.466	ENSLBEG00000002955	-	100	85.466	Labrus_bergylta
ENSFHEG00000015054	-	100	97.614	ENSMAMG00000007715	-	100	97.614	Mastacembelus_armatus
ENSFHEG00000015054	-	99	86.957	ENSMMOG00000001106	-	99	86.768	Mola_mola
ENSFHEG00000015054	-	98	94.235	ENSMMOG00000001165	-	100	95.455	Mola_mola
ENSFHEG00000015054	-	100	76.407	ENSMMOG00000018160	-	100	86.957	Mola_mola
ENSFHEG00000015054	-	100	84.599	ENSNBRG00000017346	-	99	82.500	Neolamprologus_brichardi
ENSFHEG00000015054	-	76	92.614	ENSONIG00000017760	-	98	92.614	Oreochromis_niloticus
ENSFHEG00000015054	-	100	98.265	ENSORLG00000007614	eef1a	100	98.265	Oryzias_latipes
ENSFHEG00000015054	-	100	98.485	ENSORLG00015002397	-	100	98.485	Oryzias_latipes_hsok
ENSFHEG00000015054	-	100	98.915	ENSOMEG00000018226	-	100	98.915	Oryzias_melastigma
ENSFHEG00000015054	-	94	49.885	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSFHEG00000015054	-	98	95.354	ENSPMGG00000023911	-	100	98.837	Periophthalmus_magnuspinnatus
ENSFHEG00000015054	-	100	97.831	ENSPFOG00000003924	-	100	97.579	Poecilia_formosa
ENSFHEG00000015054	-	100	97.831	ENSPLAG00000004316	-	100	97.831	Poecilia_latipinna
ENSFHEG00000015054	-	100	98.048	ENSPMEG00000001010	-	100	98.048	Poecilia_mexicana
ENSFHEG00000015054	-	100	98.052	ENSPREG00000008243	-	100	98.052	Poecilia_reticulata
ENSFHEG00000015054	-	100	95.011	ENSPNYG00000007263	-	98	95.122	Pundamilia_nyererei
ENSFHEG00000015054	-	97	81.124	YPR080W	TEF1	100	80.260	Saccharomyces_cerevisiae
ENSFHEG00000015054	-	97	81.124	YBR118W	TEF2	100	80.260	Saccharomyces_cerevisiae
ENSFHEG00000015054	-	98	83.510	ENSSMAG00000018469	-	98	83.510	Scophthalmus_maximus
ENSFHEG00000015054	-	53	93.033	ENSSMAG00000016277	-	96	93.033	Scophthalmus_maximus
ENSFHEG00000015054	-	100	96.529	ENSSDUG00000008198	-	100	96.529	Seriola_dumerili
ENSFHEG00000015054	-	98	93.792	ENSSPAG00000001710	-	98	93.792	Stegastes_partitus
ENSFHEG00000015054	-	98	95.344	ENSTRUG00000005727	ef-1a	98	95.344	Takifugu_rubripes
ENSFHEG00000015054	-	99	86.985	ENSTRUG00000005066	-	99	86.985	Takifugu_rubripes
ENSFHEG00000015054	-	97	85.714	ENSTNIG00000002617	-	94	85.714	Tetraodon_nigroviridis
ENSFHEG00000015054	-	98	95.787	ENSTNIG00000002619	-	98	95.787	Tetraodon_nigroviridis
ENSFHEG00000015054	-	100	97.831	ENSXCOG00000001542	-	100	98.889	Xiphophorus_couchianus