EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015138 (Gene tree)
Gene ID: 105927422
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 8583 bases
Position: chrKN811309.1:1448364-1456946
Accession: 105927422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000013629	zf-C2H2	PF00096.26	3.8e-26	1	5
ENSFHEP00000013629	zf-C2H2	PF00096.26	3.8e-26	2	5
ENSFHEP00000013629	zf-C2H2	PF00096.26	3.8e-26	3	5
ENSFHEP00000013629	zf-C2H2	PF00096.26	3.8e-26	4	5
ENSFHEP00000013629	zf-C2H2	PF00096.26	3.8e-26	5	5
ENSFHEP00000013629	zf-met	PF12874.7	2.2e-08	1	2
ENSFHEP00000013629	zf-met	PF12874.7	2.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000021217	-	1491	XM_012864158	ENSFHEP00000013629	328 (aa)	XP_012719612	UPI00064489EA

Gene Model

Click here to download ENSFHEG00000015138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015138	gfi1b	58	36.842	ENSFHEG00000004548	-	59	36.842
ENSFHEG00000015138	gfi1b	67	40.000	ENSFHEG00000016640	-	72	51.786
ENSFHEG00000015138	gfi1b	56	37.778	ENSFHEG00000020050	-	56	37.778
ENSFHEG00000015138	gfi1b	56	45.455	ENSFHEG00000002625	-	75	39.062
ENSFHEG00000015138	gfi1b	58	44.444	ENSFHEG00000013735	-	72	41.429
ENSFHEG00000015138	gfi1b	52	87.135	ENSFHEG00000000341	GFI1	100	50.481
ENSFHEG00000015138	gfi1b	52	47.059	ENSFHEG00000008029	-	78	41.566
ENSFHEG00000015138	gfi1b	55	43.537	ENSFHEG00000011490	-	66	42.568
ENSFHEG00000015138	gfi1b	58	43.333	ENSFHEG00000015748	-	98	43.333
ENSFHEG00000015138	gfi1b	56	41.667	ENSFHEG00000019159	-	98	41.667
ENSFHEG00000015138	gfi1b	59	41.667	ENSFHEG00000011944	-	75	40.237
ENSFHEG00000015138	gfi1b	100	49.492	ENSFHEG00000010997	gfi1ab	100	49.492
ENSFHEG00000015138	gfi1b	52	45.794	ENSFHEG00000013794	-	82	45.794
ENSFHEG00000015138	gfi1b	56	43.506	ENSFHEG00000013792	-	93	43.506
ENSFHEG00000015138	gfi1b	55	41.284	ENSFHEG00000011028	-	70	39.200
ENSFHEG00000015138	gfi1b	71	37.113	ENSFHEG00000003583	-	50	41.916
ENSFHEG00000015138	gfi1b	53	42.949	ENSFHEG00000014023	-	90	42.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015138	gfi1b	100	82.012	ENSAPOG00000001296	gfi1b	100	82.012	Acanthochromis_polyacanthus
ENSFHEG00000015138	gfi1b	99	71.341	ENSACIG00000002190	gfi1b	99	71.341	Amphilophus_citrinellus
ENSFHEG00000015138	gfi1b	100	82.927	ENSAOCG00000021187	gfi1b	100	82.927	Amphiprion_ocellaris
ENSFHEG00000015138	gfi1b	100	82.927	ENSAPEG00000016196	gfi1b	100	82.927	Amphiprion_percula
ENSFHEG00000015138	gfi1b	100	85.410	ENSATEG00000002534	gfi1b	100	85.410	Anabas_testudineus
ENSFHEG00000015138	gfi1b	100	58.551	ENSAPLG00000003373	GFI1B	100	58.551	Anas_platyrhynchos
ENSFHEG00000015138	gfi1b	100	75.000	ENSACLG00000027053	gfi1b	100	75.000	Astatotilapia_calliptera
ENSFHEG00000015138	gfi1b	100	69.733	ENSAMXG00000037544	GFI1B	100	69.733	Astyanax_mexicanus
ENSFHEG00000015138	gfi1b	100	59.036	ENSCAPG00000010404	GFI1B	100	59.036	Cavia_aperea
ENSFHEG00000015138	gfi1b	100	58.092	ENSCPBG00000021186	GFI1B	100	58.092	Chrysemys_picta_bellii
ENSFHEG00000015138	gfi1b	100	79.819	ENSCSEG00000001315	gfi1b	100	79.819	Cynoglossus_semilaevis
ENSFHEG00000015138	gfi1b	100	81.402	ENSCVAG00000017168	gfi1b	100	81.402	Cyprinodon_variegatus
ENSFHEG00000015138	gfi1b	100	68.012	ENSDARG00000079947	gfi1b	99	84.388	Danio_rerio
ENSFHEG00000015138	gfi1b	62	52.941	ENSEEUG00000012609	-	90	52.941	Erinaceus_europaeus
ENSFHEG00000015138	gfi1b	100	75.668	ENSELUG00000016933	gfi1b	100	75.668	Esox_lucius
ENSFHEG00000015138	gfi1b	100	53.439	ENSFALG00000001479	GFI1B	100	53.439	Ficedula_albicollis
ENSFHEG00000015138	gfi1b	100	67.781	ENSGMOG00000019123	gfi1b	100	67.781	Gadus_morhua
ENSFHEG00000015138	gfi1b	100	58.892	ENSGALG00000003478	GFI1B	100	58.892	Gallus_gallus
ENSFHEG00000015138	gfi1b	71	95.726	ENSGAFG00000003059	gfi1b	100	95.726	Gambusia_affinis
ENSFHEG00000015138	gfi1b	100	74.788	ENSGACG00000018134	gfi1b	100	74.788	Gasterosteus_aculeatus
ENSFHEG00000015138	gfi1b	100	59.880	ENSGAGG00000021327	GFI1B	100	59.880	Gopherus_agassizii
ENSFHEG00000015138	gfi1b	100	75.000	ENSHBUG00000005451	gfi1b	100	75.000	Haplochromis_burtoni
ENSFHEG00000015138	gfi1b	100	76.220	ENSHCOG00000013713	gfi1b	100	76.220	Hippocampus_comes
ENSFHEG00000015138	gfi1b	100	70.882	ENSIPUG00000012769	gfi1b	100	70.882	Ictalurus_punctatus
ENSFHEG00000015138	gfi1b	99	53.457	ENSJJAG00000016355	Gfi1b	100	53.457	Jaculus_jaculus
ENSFHEG00000015138	gfi1b	100	84.498	ENSKMAG00000016047	gfi1b	100	84.498	Kryptolebias_marmoratus
ENSFHEG00000015138	gfi1b	100	80.422	ENSLBEG00000020297	gfi1b	99	80.723	Labrus_bergylta
ENSFHEG00000015138	gfi1b	100	60.778	ENSLACG00000012207	GFI1B	100	60.778	Latimeria_chalumnae
ENSFHEG00000015138	gfi1b	100	68.421	ENSLOCG00000005750	gfi1b	100	68.421	Lepisosteus_oculatus
ENSFHEG00000015138	gfi1b	100	57.434	ENSLAFG00000022367	GFI1B	100	57.434	Loxodonta_africana
ENSFHEG00000015138	gfi1b	100	87.500	ENSMAMG00000003040	gfi1b	100	87.500	Mastacembelus_armatus
ENSFHEG00000015138	gfi1b	99	74.924	ENSMZEG00005015594	gfi1b	99	74.924	Maylandia_zebra
ENSFHEG00000015138	gfi1b	100	59.184	ENSMGAG00000006129	GFI1B	100	59.184	Meleagris_gallopavo
ENSFHEG00000015138	gfi1b	100	81.515	ENSMMOG00000011764	gfi1b	100	81.515	Mola_mola
ENSFHEG00000015138	gfi1b	100	53.151	ENSMODG00000012600	GFI1B	100	53.151	Monodelphis_domestica
ENSFHEG00000015138	gfi1b	100	83.232	ENSMALG00000004034	gfi1b	100	83.232	Monopterus_albus
ENSFHEG00000015138	gfi1b	99	58.876	ENSNGAG00000003333	Gfi1b	100	58.876	Nannospalax_galili
ENSFHEG00000015138	gfi1b	100	75.076	ENSNBRG00000012391	gfi1b	100	75.076	Neolamprologus_brichardi
ENSFHEG00000015138	gfi1b	100	74.772	ENSONIG00000013011	gfi1b	94	93.296	Oreochromis_niloticus
ENSFHEG00000015138	gfi1b	100	58.944	ENSOANG00000014723	GFI1B	100	58.944	Ornithorhynchus_anatinus
ENSFHEG00000015138	gfi1b	84	75.000	ENSORLG00000014390	GFI1B	96	75.000	Oryzias_latipes
ENSFHEG00000015138	gfi1b	100	79.878	ENSORLG00020003719	GFI1B	100	79.878	Oryzias_latipes_hni
ENSFHEG00000015138	gfi1b	100	79.697	ENSORLG00015017142	gfi1b	100	79.697	Oryzias_latipes_hsok
ENSFHEG00000015138	gfi1b	100	79.878	ENSOMEG00000015149	GFI1B	100	80.183	Oryzias_melastigma
ENSFHEG00000015138	gfi1b	100	58.065	ENSOGAG00000008879	GFI1B	100	58.772	Otolemur_garnettii
ENSFHEG00000015138	gfi1b	100	70.882	ENSPKIG00000007643	gfi1b	100	70.882	Paramormyrops_kingsleyae
ENSFHEG00000015138	gfi1b	100	58.239	ENSPSIG00000012112	GFI1B	100	58.239	Pelodiscus_sinensis
ENSFHEG00000015138	gfi1b	99	68.468	ENSPMGG00000006021	gfi1b	99	69.461	Periophthalmus_magnuspinnatus
ENSFHEG00000015138	gfi1b	100	52.291	ENSPCIG00000019724	GFI1B	100	52.291	Phascolarctos_cinereus
ENSFHEG00000015138	gfi1b	100	91.642	ENSPFOG00000003460	gfi1b	100	91.642	Poecilia_formosa
ENSFHEG00000015138	gfi1b	100	89.676	ENSPLAG00000017181	GFI1B	100	89.676	Poecilia_latipinna
ENSFHEG00000015138	gfi1b	100	93.009	ENSPLAG00000021960	GFI1B	100	93.009	Poecilia_latipinna
ENSFHEG00000015138	gfi1b	100	93.009	ENSPMEG00000019220	gfi1b	100	93.009	Poecilia_mexicana
ENSFHEG00000015138	gfi1b	100	93.009	ENSPMEG00000001556	GFI1B	100	93.009	Poecilia_mexicana
ENSFHEG00000015138	gfi1b	100	92.097	ENSPREG00000021718	gfi1b	100	92.097	Poecilia_reticulata
ENSFHEG00000015138	gfi1b	100	75.000	ENSPNYG00000018422	gfi1b	100	75.000	Pundamilia_nyererei
ENSFHEG00000015138	gfi1b	100	71.772	ENSPNAG00000021118	gfi1b	100	71.772	Pygocentrus_nattereri
ENSFHEG00000015138	gfi1b	100	46.923	ENSSHAG00000006462	GFI1B	100	46.923	Sarcophilus_harrisii
ENSFHEG00000015138	gfi1b	83	64.413	ENSSFOG00015011566	gfi1b	90	64.413	Scleropages_formosus
ENSFHEG00000015138	gfi1b	100	81.763	ENSSMAG00000015181	gfi1b	98	81.763	Scophthalmus_maximus
ENSFHEG00000015138	gfi1b	100	85.671	ENSSDUG00000011604	gfi1b	100	85.671	Seriola_dumerili
ENSFHEG00000015138	gfi1b	100	85.061	ENSSLDG00000013823	gfi1b	100	85.061	Seriola_lalandi_dorsalis
ENSFHEG00000015138	gfi1b	100	47.953	ENSSPUG00000016039	GFI1B	100	47.953	Sphenodon_punctatus
ENSFHEG00000015138	gfi1b	100	84.146	ENSSPAG00000022914	gfi1b	100	84.146	Stegastes_partitus
ENSFHEG00000015138	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSFHEG00000015138	gfi1b	50	46.988	ENSTGUG00000015953	-	87	46.988	Taeniopygia_guttata
ENSFHEG00000015138	gfi1b	100	78.354	ENSTRUG00000004525	gfi1b	100	78.354	Takifugu_rubripes
ENSFHEG00000015138	gfi1b	100	75.224	ENSTNIG00000003834	gfi1b	100	75.224	Tetraodon_nigroviridis
ENSFHEG00000015138	gfi1b	100	43.155	ENSTBEG00000014459	GFI1B	100	43.155	Tupaia_belangeri
ENSFHEG00000015138	gfi1b	100	56.637	ENSXETG00000006263	gfi1b	100	57.059	Xenopus_tropicalis
ENSFHEG00000015138	gfi1b	100	91.793	ENSXMAG00000027589	gfi1b	100	91.793	Xiphophorus_maculatus