EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015268 (Gene tree)
Gene ID: 105939972
Gene Symbol: -
Alias: RAB5CL|RABL
Full Name: ras-related protein Rab-5C
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 8733 bases
Position: chrKN811592.1:826377-835109
Accession: 105939972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000030138	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000021378	-	2444	XM_012882386	ENSFHEP00000030138	220 (aa)	XP_012737840	UPI0006447FA2

Gene Model

Click here to download ENSFHEG00000015268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015268	-	73	39.752	ENSFHEG00000009378	rab15	76	39.752
ENSFHEG00000015268	-	73	32.500	ENSFHEG00000023069	rab23	73	33.721
ENSFHEG00000015268	-	91	39.604	ENSFHEG00000020035	rab18b	96	39.604
ENSFHEG00000015268	-	66	33.562	ENSFHEG00000016504	si:cabz01085950.1	72	33.562
ENSFHEG00000015268	-	73	39.157	ENSFHEG00000022141	rab33a	69	39.157
ENSFHEG00000015268	-	89	40.306	ENSFHEG00000000695	-	91	40.306
ENSFHEG00000015268	-	74	46.626	ENSFHEG00000022676	-	75	46.626
ENSFHEG00000015268	-	93	34.434	ENSFHEG00000018764	RAB9A	94	34.434
ENSFHEG00000015268	-	89	38.000	ENSFHEG00000005588	RAB7A	85	40.102
ENSFHEG00000015268	-	72	34.356	ENSFHEG00000002502	si:dkey-13a21.4	79	34.356
ENSFHEG00000015268	-	71	32.298	ENSFHEG00000013691	rab34a	62	32.298
ENSFHEG00000015268	-	88	36.683	ENSFHEG00000011483	zgc:101559	85	36.683
ENSFHEG00000015268	-	75	36.145	ENSFHEG00000002885	-	78	36.145
ENSFHEG00000015268	-	74	35.976	ENSFHEG00000013106	rab42a	75	35.976
ENSFHEG00000015268	-	86	40.104	ENSFHEG00000021221	rab13	94	40.104
ENSFHEG00000015268	-	89	42.640	ENSFHEG00000014924	rab1ba	96	42.640
ENSFHEG00000015268	-	89	38.462	ENSFHEG00000004891	rab35b	96	38.462
ENSFHEG00000015268	-	61	40.000	ENSFHEG00000018450	RAB14	69	40.000
ENSFHEG00000015268	-	89	42.564	ENSFHEG00000014414	-	96	42.564
ENSFHEG00000015268	-	89	43.367	ENSFHEG00000022985	rab1ab	96	43.367
ENSFHEG00000015268	-	80	42.045	ENSFHEG00000022176	zgc:171927	82	42.045
ENSFHEG00000015268	-	77	45.402	ENSFHEG00000003018	rab25b	84	45.402
ENSFHEG00000015268	-	99	90.868	ENSFHEG00000012117	rab5c	99	90.868
ENSFHEG00000015268	-	76	41.667	ENSFHEG00000001296	rab2a	79	41.667
ENSFHEG00000015268	-	79	37.696	ENSFHEG00000006820	rab33ba	80	37.696
ENSFHEG00000015268	-	80	42.373	ENSFHEG00000015996	RAB41	84	42.373
ENSFHEG00000015268	-	77	32.418	ENSFHEG00000015993	RAB29	89	32.418
ENSFHEG00000015268	-	68	37.419	ENSFHEG00000021111	rab9a	76	37.419
ENSFHEG00000015268	-	71	33.750	ENSFHEG00000006551	rab36	59	33.750
ENSFHEG00000015268	-	88	30.049	ENSFHEG00000004532	rab34b	80	30.049
ENSFHEG00000015268	-	76	44.910	ENSFHEG00000001477	-	66	44.910
ENSFHEG00000015268	-	74	46.626	ENSFHEG00000019668	rab11a	76	46.626
ENSFHEG00000015268	-	90	39.899	ENSFHEG00000022524	rab6bb	93	39.899
ENSFHEG00000015268	-	89	41.667	ENSFHEG00000022642	rab11ba	94	41.667
ENSFHEG00000015268	-	89	39.024	ENSFHEG00000010509	rab4a	96	39.024
ENSFHEG00000015268	-	75	31.928	ENSFHEG00000009108	kras	90	30.994
ENSFHEG00000015268	-	75	31.953	ENSFHEG00000003799	rheb	92	31.953
ENSFHEG00000015268	-	99	85.253	ENSFHEG00000014070	rab5aa	99	85.253
ENSFHEG00000015268	-	74	35.542	ENSFHEG00000012041	si:dkey-34d22.5	74	35.542
ENSFHEG00000015268	-	75	30.000	ENSFHEG00000008212	rhebl1	92	30.000
ENSFHEG00000015268	-	85	34.759	ENSFHEG00000014087	RAB15	91	35.751
ENSFHEG00000015268	-	54	31.148	ENSFHEG00000019579	arl8bb	55	31.148
ENSFHEG00000015268	-	71	48.408	ENSFHEG00000000832	rab11al	75	48.408
ENSFHEG00000015268	-	80	52.571	ENSFHEG00000012702	rab22a	90	52.571
ENSFHEG00000015268	-	76	38.372	ENSFHEG00000004319	rab12	70	38.372
ENSFHEG00000015268	-	75	42.424	ENSFHEG00000019455	rab18a	80	42.424
ENSFHEG00000015268	-	73	37.267	ENSFHEG00000015015	rabl2	59	37.267
ENSFHEG00000015268	-	75	36.145	ENSFHEG00000020877	RAB39B	78	36.145
ENSFHEG00000015268	-	76	45.238	ENSFHEG00000013918	rab30	83	45.238
ENSFHEG00000015268	-	89	38.000	ENSFHEG00000007101	RAB7A	96	38.000
ENSFHEG00000015268	-	88	34.653	ENSFHEG00000009417	rab9b	89	34.653
ENSFHEG00000015268	-	74	46.626	ENSFHEG00000018353	rab11bb	75	46.626
ENSFHEG00000015268	-	77	46.552	ENSFHEG00000014186	rab25a	82	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015268	-	99	90.783	ENSG00000108774	RAB5C	100	96.000	Homo_sapiens
ENSFHEG00000015268	-	99	91.781	ENSAPOG00000016864	rab5c	99	91.781	Acanthochromis_polyacanthus
ENSFHEG00000015268	-	99	90.783	ENSAMEG00000006003	RAB5C	99	90.783	Ailuropoda_melanoleuca
ENSFHEG00000015268	-	99	90.411	ENSACIG00000010896	rab5c	99	90.411	Amphilophus_citrinellus
ENSFHEG00000015268	-	99	91.781	ENSAOCG00000016614	rab5c	99	91.781	Amphiprion_ocellaris
ENSFHEG00000015268	-	98	90.741	ENSAPEG00000017868	-	99	90.741	Amphiprion_percula
ENSFHEG00000015268	-	99	91.284	ENSATEG00000001937	rab5c	99	91.284	Anabas_testudineus
ENSFHEG00000015268	-	94	92.233	ENSANAG00000025390	RAB5C	100	92.233	Aotus_nancymaae
ENSFHEG00000015268	-	97	92.523	ENSACLG00000008615	-	100	92.342	Astatotilapia_calliptera
ENSFHEG00000015268	-	99	89.041	ENSACLG00000002706	rab5c	99	89.041	Astatotilapia_calliptera
ENSFHEG00000015268	-	99	91.364	ENSAMXG00000043717	rab5c	99	91.364	Astyanax_mexicanus
ENSFHEG00000015268	-	95	88.571	ENSAMXG00000037267	-	99	88.571	Astyanax_mexicanus
ENSFHEG00000015268	-	99	90.783	ENSBTAG00000006982	RAB5C	99	90.783	Bos_taurus
ENSFHEG00000015268	-	99	74.194	WBGene00004268	rab-5	99	74.194	Caenorhabditis_elegans
ENSFHEG00000015268	-	99	91.244	ENSCAFG00000015629	RAB5C	99	91.244	Canis_familiaris
ENSFHEG00000015268	-	99	91.244	ENSCAFG00020013537	RAB5C	99	91.244	Canis_lupus_dingo
ENSFHEG00000015268	-	99	90.783	ENSCHIG00000012960	RAB5C	99	90.783	Capra_hircus
ENSFHEG00000015268	-	99	91.244	ENSTSYG00000030531	RAB5C	99	91.244	Carlito_syrichta
ENSFHEG00000015268	-	99	90.783	ENSCCAG00000025940	RAB5C	99	90.783	Cebus_capucinus
ENSFHEG00000015268	-	99	90.783	ENSCATG00000040873	RAB5C	99	90.783	Cercocebus_atys
ENSFHEG00000015268	-	99	90.783	ENSCLAG00000016650	RAB5C	99	90.783	Chinchilla_lanigera
ENSFHEG00000015268	-	81	94.413	ENSCHOG00000009886	RAB5C	100	94.413	Choloepus_hoffmanni
ENSFHEG00000015268	-	100	74.324	ENSCING00000003340	-	100	74.324	Ciona_intestinalis
ENSFHEG00000015268	-	99	73.246	ENSCSAVG00000000613	-	99	80.982	Ciona_savignyi
ENSFHEG00000015268	-	99	90.783	ENSCGRG00001014226	Rab5c	99	90.783	Cricetulus_griseus_chok1gshd
ENSFHEG00000015268	-	99	90.783	ENSCGRG00000007534	Rab5c	99	90.783	Cricetulus_griseus_crigri
ENSFHEG00000015268	-	99	90.868	ENSCSEG00000017024	rab5c	99	90.868	Cynoglossus_semilaevis
ENSFHEG00000015268	-	99	92.237	ENSCVAG00000009550	rab5c	99	92.237	Cyprinodon_variegatus
ENSFHEG00000015268	-	99	90.783	ENSDNOG00000038853	RAB5C	99	90.783	Dasypus_novemcinctus
ENSFHEG00000015268	-	99	91.244	ENSDORG00000006819	Rab5c	99	91.244	Dipodomys_ordii
ENSFHEG00000015268	-	96	73.709	FBgn0014010	Rab5	94	73.709	Drosophila_melanogaster
ENSFHEG00000015268	-	87	82.812	ENSEBUG00000014794	rab5c	91	82.812	Eptatretus_burgeri
ENSFHEG00000015268	-	99	90.783	ENSEASG00005009281	RAB5C	99	90.783	Equus_asinus_asinus
ENSFHEG00000015268	-	99	91.244	ENSECAG00000025054	RAB5C	99	91.244	Equus_caballus
ENSFHEG00000015268	-	99	90.783	ENSEEUG00000002790	RAB5C	99	90.783	Erinaceus_europaeus
ENSFHEG00000015268	-	99	88.940	ENSELUG00000018516	rab5c	99	88.940	Esox_lucius
ENSFHEG00000015268	-	99	87.215	ENSELUG00000010439	-	99	87.215	Esox_lucius
ENSFHEG00000015268	-	99	90.783	ENSFCAG00000002148	RAB5C	99	90.783	Felis_catus
ENSFHEG00000015268	-	99	89.401	ENSFDAG00000021541	RAB5C	99	89.401	Fukomys_damarensis
ENSFHEG00000015268	-	99	89.498	ENSGMOG00000015096	rab5c	99	89.498	Gadus_morhua
ENSFHEG00000015268	-	77	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSFHEG00000015268	-	95	96.651	ENSGAFG00000003642	-	100	93.274	Gambusia_affinis
ENSFHEG00000015268	-	99	90.411	ENSGAFG00000000884	rab5c	99	90.411	Gambusia_affinis
ENSFHEG00000015268	-	99	86.697	ENSGACG00000008659	rab5c	99	86.697	Gasterosteus_aculeatus
ENSFHEG00000015268	-	99	90.783	ENSGGOG00000005472	RAB5C	99	90.783	Gorilla_gorilla
ENSFHEG00000015268	-	99	89.041	ENSHBUG00000002014	rab5c	99	89.041	Haplochromis_burtoni
ENSFHEG00000015268	-	97	92.523	ENSHBUG00000006823	-	100	92.342	Haplochromis_burtoni
ENSFHEG00000015268	-	99	88.940	ENSHGLG00000012067	RAB5C	99	88.940	Heterocephalus_glaber_female
ENSFHEG00000015268	-	95	85.782	ENSHCOG00000020238	-	99	84.932	Hippocampus_comes
ENSFHEG00000015268	-	99	92.273	ENSHCOG00000004662	rab5c	98	92.273	Hippocampus_comes
ENSFHEG00000015268	-	96	87.736	ENSIPUG00000020082	rab5c	99	89.593	Ictalurus_punctatus
ENSFHEG00000015268	-	99	90.783	ENSSTOG00000006620	RAB5C	99	90.783	Ictidomys_tridecemlineatus
ENSFHEG00000015268	-	99	91.244	ENSJJAG00000021181	Rab5c	99	91.244	Jaculus_jaculus
ENSFHEG00000015268	-	100	94.545	ENSKMAG00000017417	-	100	94.545	Kryptolebias_marmoratus
ENSFHEG00000015268	-	99	90.868	ENSKMAG00000020038	rab5c	99	90.868	Kryptolebias_marmoratus
ENSFHEG00000015268	-	99	91.324	ENSLBEG00000004128	rab5c	99	91.324	Labrus_bergylta
ENSFHEG00000015268	-	100	93.182	ENSLBEG00000010408	-	100	93.182	Labrus_bergylta
ENSFHEG00000015268	-	99	90.323	ENSLOCG00000012566	rab5c	100	90.323	Lepisosteus_oculatus
ENSFHEG00000015268	-	99	90.783	ENSMFAG00000039627	RAB5C	99	90.783	Macaca_fascicularis
ENSFHEG00000015268	-	99	90.783	ENSMNEG00000000355	RAB5C	99	90.783	Macaca_nemestrina
ENSFHEG00000015268	-	100	93.182	ENSMAMG00000016207	-	100	93.182	Mastacembelus_armatus
ENSFHEG00000015268	-	99	89.954	ENSMAMG00000022322	rab5c	99	89.954	Mastacembelus_armatus
ENSFHEG00000015268	-	99	89.041	ENSMZEG00005022735	rab5c	99	89.041	Maylandia_zebra
ENSFHEG00000015268	-	97	92.523	ENSMZEG00005021090	-	100	92.342	Maylandia_zebra
ENSFHEG00000015268	-	99	91.244	ENSMAUG00000015005	Rab5c	99	91.244	Mesocricetus_auratus
ENSFHEG00000015268	-	99	91.244	ENSMICG00000041608	RAB5C	99	91.244	Microcebus_murinus
ENSFHEG00000015268	-	99	91.705	ENSMOCG00000018531	-	99	91.705	Microtus_ochrogaster
ENSFHEG00000015268	-	99	90.367	ENSMMOG00000020621	rab5c	99	90.367	Mola_mola
ENSFHEG00000015268	-	100	90.909	ENSMALG00000022348	-	100	90.909	Monopterus_albus
ENSFHEG00000015268	-	97	84.038	ENSMALG00000006052	rab5c	99	82.511	Monopterus_albus
ENSFHEG00000015268	-	99	91.705	MGP_CAROLIEiJ_G0017184	Rab5c	99	91.705	Mus_caroli
ENSFHEG00000015268	-	99	91.705	ENSMUSG00000019173	Rab5c	99	91.705	Mus_musculus
ENSFHEG00000015268	-	99	91.705	MGP_PahariEiJ_G0018314	Rab5c	99	91.705	Mus_pahari
ENSFHEG00000015268	-	99	91.705	MGP_SPRETEiJ_G0018027	Rab5c	99	91.705	Mus_spretus
ENSFHEG00000015268	-	99	90.783	ENSMPUG00000010554	RAB5C	99	90.783	Mustela_putorius_furo
ENSFHEG00000015268	-	99	91.244	ENSNGAG00000010286	Rab5c	99	91.244	Nannospalax_galili
ENSFHEG00000015268	-	97	92.523	ENSNBRG00000016922	-	100	92.342	Neolamprologus_brichardi
ENSFHEG00000015268	-	99	89.954	ENSNBRG00000018165	rab5c	99	89.954	Neolamprologus_brichardi
ENSFHEG00000015268	-	81	88.827	ENSOPRG00000008255	RAB5C	100	88.827	Ochotona_princeps
ENSFHEG00000015268	-	99	90.323	ENSODEG00000017920	RAB5C	99	90.323	Octodon_degus
ENSFHEG00000015268	-	99	90.411	ENSONIG00000001113	rab5c	99	90.411	Oreochromis_niloticus
ENSFHEG00000015268	-	99	89.908	ENSORLG00000003882	rab5c	99	89.908	Oryzias_latipes
ENSFHEG00000015268	-	99	89.908	ENSORLG00020008388	rab5c	99	89.908	Oryzias_latipes_hni
ENSFHEG00000015268	-	99	89.908	ENSORLG00015021900	rab5c	99	89.908	Oryzias_latipes_hsok
ENSFHEG00000015268	-	99	89.908	ENSOMEG00000023078	rab5c	99	89.908	Oryzias_melastigma
ENSFHEG00000015268	-	99	91.244	ENSOGAG00000009456	RAB5C	99	91.244	Otolemur_garnettii
ENSFHEG00000015268	-	99	90.783	ENSOARG00000018768	RAB5C	99	90.783	Ovis_aries
ENSFHEG00000015268	-	99	90.783	ENSPPAG00000037206	RAB5C	99	90.783	Pan_paniscus
ENSFHEG00000015268	-	99	90.783	ENSPPRG00000005745	RAB5C	99	90.783	Panthera_pardus
ENSFHEG00000015268	-	99	90.783	ENSPTIG00000008177	RAB5C	99	90.783	Panthera_tigris_altaica
ENSFHEG00000015268	-	99	90.783	ENSPTRG00000009194	RAB5C	99	90.783	Pan_troglodytes
ENSFHEG00000015268	-	99	87.558	ENSPKIG00000001237	-	99	87.558	Paramormyrops_kingsleyae
ENSFHEG00000015268	-	99	85.253	ENSPKIG00000020112	-	99	85.253	Paramormyrops_kingsleyae
ENSFHEG00000015268	-	97	91.549	ENSPMGG00000010792	rab5c	98	91.549	Periophthalmus_magnuspinnatus
ENSFHEG00000015268	-	99	91.705	ENSPEMG00000017971	Rab5c	99	91.705	Peromyscus_maniculatus_bairdii
ENSFHEG00000015268	-	99	77.982	ENSPMAG00000001399	rab5c	100	77.982	Petromyzon_marinus
ENSFHEG00000015268	-	99	75.676	ENSPMAG00000000008	rab5c	99	75.676	Petromyzon_marinus
ENSFHEG00000015268	-	99	76.606	ENSPMAG00000007867	rab5c	99	76.606	Petromyzon_marinus
ENSFHEG00000015268	-	99	90.323	ENSPCIG00000020225	-	99	90.323	Phascolarctos_cinereus
ENSFHEG00000015268	-	99	90.411	ENSPLAG00000004790	rab5c	99	90.411	Poecilia_latipinna
ENSFHEG00000015268	-	99	94.977	ENSPLAG00000016333	-	100	94.977	Poecilia_latipinna
ENSFHEG00000015268	-	99	90.411	ENSPMEG00000011336	rab5c	99	90.411	Poecilia_mexicana
ENSFHEG00000015268	-	97	96.244	ENSPMEG00000012614	-	99	94.570	Poecilia_mexicana
ENSFHEG00000015268	-	86	95.767	ENSPREG00000022167	-	89	97.268	Poecilia_reticulata
ENSFHEG00000015268	-	99	90.411	ENSPREG00000010146	rab5c	99	90.411	Poecilia_reticulata
ENSFHEG00000015268	-	99	90.783	ENSPPYG00000008398	RAB5C	99	90.783	Pongo_abelii
ENSFHEG00000015268	-	99	89.862	ENSPCAG00000016412	RAB5C	99	89.862	Procavia_capensis
ENSFHEG00000015268	-	99	90.783	ENSPCOG00000026327	RAB5C	99	90.783	Propithecus_coquereli
ENSFHEG00000015268	-	99	91.244	ENSPVAG00000003867	RAB5C	99	91.244	Pteropus_vampyrus
ENSFHEG00000015268	-	99	89.041	ENSPNYG00000010615	rab5c	99	89.041	Pundamilia_nyererei
ENSFHEG00000015268	-	97	92.523	ENSPNYG00000015851	-	100	92.342	Pundamilia_nyererei
ENSFHEG00000015268	-	96	88.152	ENSPNAG00000002218	-	99	88.152	Pygocentrus_nattereri
ENSFHEG00000015268	-	99	90.909	ENSPNAG00000028138	rab5c	99	90.909	Pygocentrus_nattereri
ENSFHEG00000015268	-	99	91.244	ENSRNOG00000018568	Rab5c	99	91.244	Rattus_norvegicus
ENSFHEG00000015268	-	99	90.783	ENSRBIG00000031376	RAB5C	99	90.783	Rhinopithecus_bieti
ENSFHEG00000015268	-	99	90.783	ENSRROG00000032895	RAB5C	99	90.783	Rhinopithecus_roxellana
ENSFHEG00000015268	-	99	90.783	ENSSBOG00000032552	-	99	90.783	Saimiri_boliviensis_boliviensis
ENSFHEG00000015268	-	99	90.783	ENSSHAG00000005267	-	99	90.783	Sarcophilus_harrisii
ENSFHEG00000015268	-	99	85.253	ENSSFOG00015009988	-	98	85.253	Scleropages_formosus
ENSFHEG00000015268	-	95	90.909	ENSSMAG00000007323	rab5c	99	89.041	Scophthalmus_maximus
ENSFHEG00000015268	-	99	90.411	ENSSDUG00000023008	rab5c	99	90.411	Seriola_dumerili
ENSFHEG00000015268	-	99	89.498	ENSSLDG00000017771	rab5c	99	89.498	Seriola_lalandi_dorsalis
ENSFHEG00000015268	-	99	90.783	ENSSPUG00000012950	-	99	90.783	Sphenodon_punctatus
ENSFHEG00000015268	-	99	90.868	ENSSPAG00000006436	rab5c	99	90.868	Stegastes_partitus
ENSFHEG00000015268	-	99	90.783	ENSSSCG00000032467	RAB5C	99	90.783	Sus_scrofa
ENSFHEG00000015268	-	99	89.954	ENSTRUG00000015590	rab5c	99	89.954	Takifugu_rubripes
ENSFHEG00000015268	-	99	88.479	ENSTNIG00000011711	rab5c	98	88.479	Tetraodon_nigroviridis
ENSFHEG00000015268	-	99	90.783	ENSTBEG00000007092	RAB5C	99	90.783	Tupaia_belangeri
ENSFHEG00000015268	-	99	90.323	ENSTTRG00000006673	RAB5C	99	90.323	Tursiops_truncatus
ENSFHEG00000015268	-	99	90.783	ENSUAMG00000024343	RAB5C	99	90.783	Ursus_americanus
ENSFHEG00000015268	-	99	90.783	ENSUMAG00000023270	RAB5C	99	90.783	Ursus_maritimus
ENSFHEG00000015268	-	95	98.086	ENSXCOG00000006300	-	100	94.619	Xiphophorus_couchianus
ENSFHEG00000015268	-	99	90.868	ENSXCOG00000016788	rab5c	99	90.868	Xiphophorus_couchianus
ENSFHEG00000015268	-	99	95.434	ENSXMAG00000022179	-	100	95.434	Xiphophorus_maculatus
ENSFHEG00000015268	-	99	90.411	ENSXMAG00000003266	rab5c	99	90.411	Xiphophorus_maculatus