EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015410 (Gene tree)
Gene ID: 105929184
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 11153 bases
Position: chrKN811335.1:1170811-1181963
Accession: 105929184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000013872	RNA_pol_L_2	PF13656.6	9.7e-30	1	1
ENSFHEP00000013872	RNA_pol_L	PF01193.24	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000021530	-	348	XM_012866849	ENSFHEP00000013872	115 (aa)	XP_012722303	-

Gene Model

Click here to download ENSFHEG00000015410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015410	polr1d	93	32.710	ENSFHEG00000006625	polr2j	89	32.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015410	polr1d	96	72.727	ENSG00000186184	POLR1D	91	72.642	Homo_sapiens
ENSFHEG00000015410	polr1d	89	82.353	ENSAPOG00000021882	polr1d	96	82.353	Acanthochromis_polyacanthus
ENSFHEG00000015410	polr1d	96	73.636	ENSAMEG00000019095	POLR1D	87	73.636	Ailuropoda_melanoleuca
ENSFHEG00000015410	polr1d	99	84.348	ENSACIG00000013328	polr1d	100	84.348	Amphilophus_citrinellus
ENSFHEG00000015410	polr1d	99	82.456	ENSAOCG00000018500	polr1d	100	82.456	Amphiprion_ocellaris
ENSFHEG00000015410	polr1d	99	83.333	ENSAPEG00000009489	polr1d	100	83.333	Amphiprion_percula
ENSFHEG00000015410	polr1d	99	85.088	ENSATEG00000019322	polr1d	100	85.088	Anabas_testudineus
ENSFHEG00000015410	polr1d	97	69.643	ENSACAG00000015753	POLR1D	97	69.643	Anolis_carolinensis
ENSFHEG00000015410	polr1d	96	72.727	ENSANAG00000024486	POLR1D	82	72.727	Aotus_nancymaae
ENSFHEG00000015410	polr1d	99	88.596	ENSACLG00000023805	polr1d	100	88.596	Astatotilapia_calliptera
ENSFHEG00000015410	polr1d	98	74.336	ENSAMXG00000036118	polr1d	98	74.336	Astyanax_mexicanus
ENSFHEG00000015410	polr1d	94	73.148	ENSBTAG00000008642	POLR1D	80	73.148	Bos_taurus
ENSFHEG00000015410	polr1d	94	73.148	ENSBTAG00000033252	-	80	73.148	Bos_taurus
ENSFHEG00000015410	polr1d	70	38.750	WBGene00010230	rpac-19	56	38.750	Caenorhabditis_elegans
ENSFHEG00000015410	polr1d	96	73.636	ENSCJAG00000044669	POLR1D	82	73.636	Callithrix_jacchus
ENSFHEG00000015410	polr1d	96	73.636	ENSCAFG00000006755	POLR1D	82	73.636	Canis_familiaris
ENSFHEG00000015410	polr1d	94	74.074	ENSCHIG00000021910	POLR1D	80	74.074	Capra_hircus
ENSFHEG00000015410	polr1d	90	75.000	ENSTSYG00000026817	-	78	75.000	Carlito_syrichta
ENSFHEG00000015410	polr1d	92	62.963	ENSTSYG00000034852	-	89	62.963	Carlito_syrichta
ENSFHEG00000015410	polr1d	56	62.500	ENSCAPG00000006058	-	65	62.500	Cavia_aperea
ENSFHEG00000015410	polr1d	57	60.606	ENSCPOG00000030450	-	67	60.606	Cavia_porcellus
ENSFHEG00000015410	polr1d	94	74.074	ENSCCAG00000021349	-	80	74.074	Cebus_capucinus
ENSFHEG00000015410	polr1d	96	57.273	ENSCCAG00000020191	-	80	57.273	Cebus_capucinus
ENSFHEG00000015410	polr1d	92	62.264	ENSCATG00000022900	-	79	62.264	Cercocebus_atys
ENSFHEG00000015410	polr1d	96	72.727	ENSCATG00000030710	-	82	72.727	Cercocebus_atys
ENSFHEG00000015410	polr1d	94	74.074	ENSCLAG00000017623	POLR1D	86	74.074	Chinchilla_lanigera
ENSFHEG00000015410	polr1d	88	77.228	ENSCPBG00000004719	POLR1D	100	77.228	Chrysemys_picta_bellii
ENSFHEG00000015410	polr1d	92	72.642	ENSCANG00000028632	-	80	72.642	Colobus_angolensis_palliatus
ENSFHEG00000015410	polr1d	92	70.755	ENSCANG00000037694	-	80	70.755	Colobus_angolensis_palliatus
ENSFHEG00000015410	polr1d	96	72.727	ENSCGRG00001021251	Polr1d	82	72.727	Cricetulus_griseus_chok1gshd
ENSFHEG00000015410	polr1d	96	72.727	ENSCGRG00000011639	Polr1d	82	72.727	Cricetulus_griseus_crigri
ENSFHEG00000015410	polr1d	92	83.019	ENSCSEG00000018268	polr1d	100	79.487	Cynoglossus_semilaevis
ENSFHEG00000015410	polr1d	99	91.228	ENSCVAG00000018527	polr1d	100	91.228	Cyprinodon_variegatus
ENSFHEG00000015410	polr1d	96	74.545	ENSDARG00000037570	polr1d	97	74.545	Danio_rerio
ENSFHEG00000015410	polr1d	100	68.696	ENSDNOG00000046247	-	85	68.696	Dasypus_novemcinctus
ENSFHEG00000015410	polr1d	100	69.565	ENSDNOG00000043676	-	86	69.565	Dasypus_novemcinctus
ENSFHEG00000015410	polr1d	93	74.766	ENSDORG00000029155	Polr1d	80	74.766	Dipodomys_ordii
ENSFHEG00000015410	polr1d	74	48.235	FBgn0086447	l(2)37Cg	80	48.235	Drosophila_melanogaster
ENSFHEG00000015410	polr1d	94	74.074	ENSETEG00000012797	POLR1D	86	74.074	Echinops_telfairi
ENSFHEG00000015410	polr1d	80	63.043	ENSEBUG00000011748	polr1d	64	63.043	Eptatretus_burgeri
ENSFHEG00000015410	polr1d	97	73.214	ENSEASG00005022487	POLR1D	86	73.214	Equus_asinus_asinus
ENSFHEG00000015410	polr1d	94	75.000	ENSEEUG00000013144	POLR1D	86	75.000	Erinaceus_europaeus
ENSFHEG00000015410	polr1d	94	77.778	ENSELUG00000005105	rpac2	95	77.778	Esox_lucius
ENSFHEG00000015410	polr1d	96	73.636	ENSFCAG00000030162	POLR1D	82	73.636	Felis_catus
ENSFHEG00000015410	polr1d	87	73.000	ENSFALG00000011463	POLR1D	99	73.000	Ficedula_albicollis
ENSFHEG00000015410	polr1d	94	73.148	ENSFDAG00000004463	POLR1D	80	73.148	Fukomys_damarensis
ENSFHEG00000015410	polr1d	60	63.768	ENSGALG00000007470	POLR1D	68	63.768	Gallus_gallus
ENSFHEG00000015410	polr1d	99	89.474	ENSGAFG00000001693	polr1d	100	89.474	Gambusia_affinis
ENSFHEG00000015410	polr1d	94	88.889	ENSGACG00000018585	polr1d	92	88.889	Gasterosteus_aculeatus
ENSFHEG00000015410	polr1d	99	76.316	ENSGAGG00000008503	POLR1D	100	76.316	Gopherus_agassizii
ENSFHEG00000015410	polr1d	96	72.727	ENSGGOG00000004235	POLR1D	82	72.727	Gorilla_gorilla
ENSFHEG00000015410	polr1d	99	88.596	ENSHBUG00000002111	polr1d	100	88.596	Haplochromis_burtoni
ENSFHEG00000015410	polr1d	94	72.222	ENSHGLG00000003202	POLR1D	80	72.222	Heterocephalus_glaber_female
ENSFHEG00000015410	polr1d	94	72.222	ENSHGLG00100009393	POLR1D	80	72.222	Heterocephalus_glaber_male
ENSFHEG00000015410	polr1d	99	79.825	ENSHCOG00000003258	polr1d	100	79.825	Hippocampus_comes
ENSFHEG00000015410	polr1d	95	78.899	ENSIPUG00000014810	polr1d	95	78.899	Ictalurus_punctatus
ENSFHEG00000015410	polr1d	96	72.727	ENSSTOG00000013877	POLR1D	82	72.727	Ictidomys_tridecemlineatus
ENSFHEG00000015410	polr1d	95	55.963	ENSJJAG00000021667	-	63	55.963	Jaculus_jaculus
ENSFHEG00000015410	polr1d	94	72.222	ENSJJAG00000022671	-	89	72.222	Jaculus_jaculus
ENSFHEG00000015410	polr1d	99	87.719	ENSKMAG00000015256	polr1d	100	87.719	Kryptolebias_marmoratus
ENSFHEG00000015410	polr1d	99	85.088	ENSLBEG00000015919	polr1d	100	85.088	Labrus_bergylta
ENSFHEG00000015410	polr1d	93	67.593	ENSLACG00000006810	POLR1D	90	67.593	Latimeria_chalumnae
ENSFHEG00000015410	polr1d	63	82.432	ENSLOCG00000014976	polr1d	100	82.432	Lepisosteus_oculatus
ENSFHEG00000015410	polr1d	92	72.642	ENSLAFG00000032290	POLR1D	80	72.642	Loxodonta_africana
ENSFHEG00000015410	polr1d	96	72.727	ENSMFAG00000045264	POLR1D	84	72.727	Macaca_fascicularis
ENSFHEG00000015410	polr1d	70	69.136	ENSMMUG00000041570	-	73	69.136	Macaca_mulatta
ENSFHEG00000015410	polr1d	92	72.642	ENSMMUG00000020386	POLR1D	91	72.642	Macaca_mulatta
ENSFHEG00000015410	polr1d	92	58.491	ENSMNEG00000038120	-	78	58.491	Macaca_nemestrina
ENSFHEG00000015410	polr1d	96	72.727	ENSMNEG00000008630	-	82	72.727	Macaca_nemestrina
ENSFHEG00000015410	polr1d	96	72.727	ENSMLEG00000041048	-	82	72.727	Mandrillus_leucophaeus
ENSFHEG00000015410	polr1d	92	64.151	ENSMLEG00000032251	-	79	64.151	Mandrillus_leucophaeus
ENSFHEG00000015410	polr1d	87	86.000	ENSMAMG00000014834	polr1d	93	86.000	Mastacembelus_armatus
ENSFHEG00000015410	polr1d	89	86.275	ENSMZEG00005006638	polr1d	90	86.275	Maylandia_zebra
ENSFHEG00000015410	polr1d	80	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSFHEG00000015410	polr1d	96	72.727	ENSMAUG00000001946	Polr1d	82	72.727	Mesocricetus_auratus
ENSFHEG00000015410	polr1d	94	73.148	ENSMICG00000016883	-	80	73.148	Microcebus_murinus
ENSFHEG00000015410	polr1d	88	62.376	ENSMICG00000007349	-	74	62.376	Microcebus_murinus
ENSFHEG00000015410	polr1d	96	71.818	ENSMOCG00000021288	Polr1d	82	71.818	Microtus_ochrogaster
ENSFHEG00000015410	polr1d	99	87.719	ENSMMOG00000009605	polr1d	100	87.719	Mola_mola
ENSFHEG00000015410	polr1d	99	73.684	ENSMODG00000023881	POLR1D	100	73.684	Monodelphis_domestica
ENSFHEG00000015410	polr1d	99	83.333	ENSMALG00000010652	polr1d	100	83.333	Monopterus_albus
ENSFHEG00000015410	polr1d	93	72.897	MGP_CAROLIEiJ_G0028034	Polr1d	80	72.897	Mus_caroli
ENSFHEG00000015410	polr1d	93	72.897	ENSMUSG00000029642	Polr1d	80	72.897	Mus_musculus
ENSFHEG00000015410	polr1d	93	72.897	MGP_PahariEiJ_G0024600	Polr1d	80	72.897	Mus_pahari
ENSFHEG00000015410	polr1d	93	72.897	MGP_SPRETEiJ_G0029032	Polr1d	80	72.897	Mus_spretus
ENSFHEG00000015410	polr1d	90	68.269	ENSMLUG00000004118	-	78	68.269	Myotis_lucifugus
ENSFHEG00000015410	polr1d	96	72.727	ENSMLUG00000027169	-	82	72.727	Myotis_lucifugus
ENSFHEG00000015410	polr1d	93	72.897	ENSNGAG00000006014	Polr1d	92	72.897	Nannospalax_galili
ENSFHEG00000015410	polr1d	99	88.596	ENSNBRG00000020327	polr1d	100	88.596	Neolamprologus_brichardi
ENSFHEG00000015410	polr1d	96	72.727	ENSNLEG00000000358	POLR1D	82	72.727	Nomascus_leucogenys
ENSFHEG00000015410	polr1d	94	62.963	ENSODEG00000014801	-	78	62.963	Octodon_degus
ENSFHEG00000015410	polr1d	94	74.074	ENSODEG00000005294	-	80	74.074	Octodon_degus
ENSFHEG00000015410	polr1d	92	78.302	ENSOANG00000008708	-	98	78.302	Ornithorhynchus_anatinus
ENSFHEG00000015410	polr1d	94	74.074	ENSOCUG00000015706	POLR1D	66	74.074	Oryctolagus_cuniculus
ENSFHEG00000015410	polr1d	99	85.088	ENSORLG00000010257	polr1d	100	85.088	Oryzias_latipes
ENSFHEG00000015410	polr1d	100	85.217	ENSORLG00020000533	polr1d	78	85.217	Oryzias_latipes_hni
ENSFHEG00000015410	polr1d	100	86.087	ENSORLG00015013267	polr1d	76	86.087	Oryzias_latipes_hsok
ENSFHEG00000015410	polr1d	100	84.348	ENSOMEG00000014912	polr1d	77	84.348	Oryzias_melastigma
ENSFHEG00000015410	polr1d	100	70.435	ENSOGAG00000014601	POLR1D	86	70.435	Otolemur_garnettii
ENSFHEG00000015410	polr1d	94	74.074	ENSOARG00000017005	POLR1D	82	74.074	Ovis_aries
ENSFHEG00000015410	polr1d	97	71.429	ENSPPAG00000028138	POLR1D	83	71.429	Pan_paniscus
ENSFHEG00000015410	polr1d	96	73.636	ENSPPRG00000003381	POLR1D	82	73.636	Panthera_pardus
ENSFHEG00000015410	polr1d	96	73.636	ENSPTIG00000018137	POLR1D	82	73.636	Panthera_tigris_altaica
ENSFHEG00000015410	polr1d	96	72.727	ENSPTRG00000005734	POLR1D	82	72.727	Pan_troglodytes
ENSFHEG00000015410	polr1d	92	63.208	ENSPANG00000035051	-	79	63.208	Papio_anubis
ENSFHEG00000015410	polr1d	96	72.727	ENSPANG00000020259	-	82	72.727	Papio_anubis
ENSFHEG00000015410	polr1d	84	78.351	ENSPKIG00000021891	polr1d	95	59.504	Paramormyrops_kingsleyae
ENSFHEG00000015410	polr1d	100	73.043	ENSPSIG00000011822	POLR1D	89	73.043	Pelodiscus_sinensis
ENSFHEG00000015410	polr1d	100	74.783	ENSPMGG00000012998	POLR1D	85	74.783	Periophthalmus_magnuspinnatus
ENSFHEG00000015410	polr1d	100	83.478	ENSPMGG00000010359	polr1d	100	83.478	Periophthalmus_magnuspinnatus
ENSFHEG00000015410	polr1d	96	70.909	ENSPEMG00000006336	-	84	70.909	Peromyscus_maniculatus_bairdii
ENSFHEG00000015410	polr1d	88	62.376	ENSPMAG00000004228	polr1d	85	62.376	Petromyzon_marinus
ENSFHEG00000015410	polr1d	99	72.807	ENSPCIG00000001673	POLR1D	100	72.807	Phascolarctos_cinereus
ENSFHEG00000015410	polr1d	99	90.351	ENSPFOG00000023343	polr1d	100	90.351	Poecilia_formosa
ENSFHEG00000015410	polr1d	99	90.351	ENSPLAG00000009675	polr1d	100	90.351	Poecilia_latipinna
ENSFHEG00000015410	polr1d	99	90.351	ENSPMEG00000004628	polr1d	100	90.351	Poecilia_mexicana
ENSFHEG00000015410	polr1d	99	90.351	ENSPREG00000022032	polr1d	100	90.351	Poecilia_reticulata
ENSFHEG00000015410	polr1d	96	70.909	ENSPCOG00000028175	POLR1D	82	70.909	Propithecus_coquereli
ENSFHEG00000015410	polr1d	99	88.596	ENSPNYG00000000107	polr1d	100	88.596	Pundamilia_nyererei
ENSFHEG00000015410	polr1d	95	73.394	ENSPNAG00000001512	polr1d	92	73.394	Pygocentrus_nattereri
ENSFHEG00000015410	polr1d	96	72.727	ENSRBIG00000036378	-	82	72.727	Rhinopithecus_bieti
ENSFHEG00000015410	polr1d	92	69.811	ENSRBIG00000000336	-	80	69.811	Rhinopithecus_bieti
ENSFHEG00000015410	polr1d	96	72.727	ENSRROG00000042232	-	82	72.727	Rhinopithecus_roxellana
ENSFHEG00000015410	polr1d	92	70.755	ENSRROG00000026751	-	80	70.755	Rhinopithecus_roxellana
ENSFHEG00000015410	polr1d	78	52.222	YNL113W	RPC19	71	48.515	Saccharomyces_cerevisiae
ENSFHEG00000015410	polr1d	89	71.569	ENSSBOG00000030146	-	74	71.569	Saimiri_boliviensis_boliviensis
ENSFHEG00000015410	polr1d	96	72.727	ENSSBOG00000028482	-	82	72.727	Saimiri_boliviensis_boliviensis
ENSFHEG00000015410	polr1d	97	71.171	ENSSHAG00000001190	POLR1D	86	71.171	Sarcophilus_harrisii
ENSFHEG00000015410	polr1d	92	77.358	ENSSFOG00015011375	polr1d	93	77.358	Scleropages_formosus
ENSFHEG00000015410	polr1d	99	85.965	ENSSMAG00000011861	polr1d	100	85.965	Scophthalmus_maximus
ENSFHEG00000015410	polr1d	99	85.088	ENSSDUG00000011930	polr1d	100	85.088	Seriola_dumerili
ENSFHEG00000015410	polr1d	98	75.439	ENSSLDG00000023871	polr1d	97	75.439	Seriola_lalandi_dorsalis
ENSFHEG00000015410	polr1d	96	73.636	ENSSARG00000007840	POLR1D	82	73.636	Sorex_araneus
ENSFHEG00000015410	polr1d	91	75.238	ENSSPUG00000005786	POLR1D	96	72.321	Sphenodon_punctatus
ENSFHEG00000015410	polr1d	99	86.842	ENSSPAG00000011764	polr1d	100	86.842	Stegastes_partitus
ENSFHEG00000015410	polr1d	90	73.077	ENSSSCG00000009310	POLR1D	78	73.077	Sus_scrofa
ENSFHEG00000015410	polr1d	81	76.344	ENSTGUG00000005450	POLR1D	97	76.344	Taeniopygia_guttata
ENSFHEG00000015410	polr1d	99	80.702	ENSTRUG00000019741	polr1d	100	80.702	Takifugu_rubripes
ENSFHEG00000015410	polr1d	100	70.435	ENSTBEG00000007006	POLR1D	92	70.435	Tupaia_belangeri
ENSFHEG00000015410	polr1d	96	73.636	ENSUAMG00000011413	POLR1D	82	73.636	Ursus_americanus
ENSFHEG00000015410	polr1d	96	73.636	ENSUMAG00000016968	POLR1D	85	73.636	Ursus_maritimus
ENSFHEG00000015410	polr1d	96	73.636	ENSVVUG00000009216	POLR1D	82	73.636	Vulpes_vulpes
ENSFHEG00000015410	polr1d	88	90.099	ENSXCOG00000011731	polr1d	78	90.099	Xiphophorus_couchianus
ENSFHEG00000015410	polr1d	88	91.089	ENSXMAG00000017538	polr1d	78	91.089	Xiphophorus_maculatus