EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015487 (Gene tree)
Gene ID: 105916922
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 11682 bases
Position: chrKN805734.1:463891-475572
Accession: 105916922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000030240	DEAD	PF00270.29	3.4e-42	1	1
ENSFHEP00000013910	DEAD	PF00270.29	4.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000021558	-	1347	-	ENSFHEP00000030240	448 (aa)	-	-
ENSFHET00000032586	-	5454	XM_012851576	ENSFHEP00000013910	482 (aa)	XP_012707030	UPI000644EF82

Gene Model

Click here to download ENSFHEG00000015487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015487	-	68	35.191	ENSFHEG00000007798	zgc:193690	79	35.952
ENSFHEG00000015487	-	75	30.952	ENSFHEG00000008904	DDX41	59	31.436
ENSFHEG00000015487	-	82	35.589	ENSFHEG00000009716	-	93	35.589
ENSFHEG00000015487	-	72	31.356	ENSFHEG00000011226	ddx43	64	31.356
ENSFHEG00000015487	-	77	39.247	ENSFHEG00000000359	eif4a1b	81	39.247
ENSFHEG00000015487	-	96	81.875	ENSFHEG00000021202	ddx6	99	81.875
ENSFHEG00000015487	-	83	30.370	ENSFHEG00000011435	ddx47	84	30.597
ENSFHEG00000015487	-	80	31.494	ENSFHEG00000017499	ddx23	59	31.494
ENSFHEG00000015487	-	71	30.000	ENSFHEG00000006419	ddx27	90	33.742
ENSFHEG00000015487	-	72	30.337	ENSFHEG00000005567	DDX5	61	30.025
ENSFHEG00000015487	-	72	35.989	ENSFHEG00000006352	ddx19	76	35.989
ENSFHEG00000015487	-	80	33.668	ENSFHEG00000019742	ddx20	52	33.668
ENSFHEG00000015487	-	69	30.423	ENSFHEG00000007912	ddx55	60	31.268
ENSFHEG00000015487	-	78	31.308	ENSFHEG00000012643	-	71	31.308
ENSFHEG00000015487	-	68	45.098	ENSFHEG00000008444	ddx1	53	45.098
ENSFHEG00000015487	-	82	35.088	ENSFHEG00000002643	ddx39aa	93	35.088
ENSFHEG00000015487	-	77	40.323	ENSFHEG00000016755	eif4a2	90	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015487	-	98	86.221	ENSAPOG00000014829	ddx61	98	86.221	Acanthochromis_polyacanthus
ENSFHEG00000015487	-	78	97.333	ENSAPOG00000023627	-	95	97.333	Acanthochromis_polyacanthus
ENSFHEG00000015487	-	100	92.308	ENSACIG00000018355	-	100	92.308	Amphilophus_citrinellus
ENSFHEG00000015487	-	98	87.029	ENSAOCG00000007627	ddx61	98	87.029	Amphiprion_ocellaris
ENSFHEG00000015487	-	100	92.449	ENSAOCG00000006269	-	100	93.252	Amphiprion_ocellaris
ENSFHEG00000015487	-	100	92.449	ENSAPEG00000020642	-	100	93.252	Amphiprion_percula
ENSFHEG00000015487	-	100	92.449	ENSAPEG00000021368	-	100	93.252	Amphiprion_percula
ENSFHEG00000015487	-	98	87.029	ENSAPEG00000007293	ddx61	98	87.029	Amphiprion_percula
ENSFHEG00000015487	-	96	87.049	ENSATEG00000011302	ddx61	99	86.076	Anabas_testudineus
ENSFHEG00000015487	-	100	91.616	ENSATEG00000005424	-	100	91.616	Anabas_testudineus
ENSFHEG00000015487	-	98	86.186	ENSACLG00000027620	ddx61	99	86.186	Astatotilapia_calliptera
ENSFHEG00000015487	-	100	93.252	ENSACLG00000003260	-	100	93.252	Astatotilapia_calliptera
ENSFHEG00000015487	-	96	87.949	ENSAMXG00000032542	ddx61	99	87.164	Astyanax_mexicanus
ENSFHEG00000015487	-	99	88.462	ENSAMXG00000033980	-	100	88.462	Astyanax_mexicanus
ENSFHEG00000015487	-	100	91.207	ENSCSEG00000009893	-	100	91.207	Cynoglossus_semilaevis
ENSFHEG00000015487	-	100	96.473	ENSCVAG00000011006	-	100	96.473	Cyprinodon_variegatus
ENSFHEG00000015487	-	99	84.221	ENSDARG00000018425	ddx61	99	84.221	Danio_rerio
ENSFHEG00000015487	-	98	87.967	ENSELUG00000020545	ddx61	99	87.967	Esox_lucius
ENSFHEG00000015487	-	99	89.344	ENSELUG00000022538	-	99	89.344	Esox_lucius
ENSFHEG00000015487	-	71	85.714	ENSGMOG00000003561	-	100	87.156	Gadus_morhua
ENSFHEG00000015487	-	96	87.686	ENSGMOG00000013762	ddx61	99	87.002	Gadus_morhua
ENSFHEG00000015487	-	100	96.273	ENSGAFG00000015865	-	100	96.273	Gambusia_affinis
ENSFHEG00000015487	-	99	91.097	ENSGACG00000002413	-	100	91.097	Gasterosteus_aculeatus
ENSFHEG00000015487	-	98	86.214	ENSGACG00000003401	ddx61	100	86.214	Gasterosteus_aculeatus
ENSFHEG00000015487	-	98	86.392	ENSHBUG00000017832	ddx61	99	86.392	Haplochromis_burtoni
ENSFHEG00000015487	-	100	93.252	ENSHBUG00000017033	-	100	93.252	Haplochromis_burtoni
ENSFHEG00000015487	-	100	87.321	ENSHCOG00000012238	-	100	87.321	Hippocampus_comes
ENSFHEG00000015487	-	96	84.402	ENSHCOG00000008184	ddx61	97	84.402	Hippocampus_comes
ENSFHEG00000015487	-	96	85.745	ENSIPUG00000012823	DDX6	99	84.454	Ictalurus_punctatus
ENSFHEG00000015487	-	96	88.085	ENSIPUG00000008367	-	100	86.515	Ictalurus_punctatus
ENSFHEG00000015487	-	100	93.252	ENSKMAG00000007213	-	100	93.252	Kryptolebias_marmoratus
ENSFHEG00000015487	-	96	87.131	ENSLBEG00000001740	ddx61	98	87.131	Labrus_bergylta
ENSFHEG00000015487	-	100	89.516	ENSLBEG00000016890	-	100	90.524	Labrus_bergylta
ENSFHEG00000015487	-	97	84.855	ENSLACG00000015214	ddx61	100	84.855	Latimeria_chalumnae
ENSFHEG00000015487	-	95	52.304	ENSLOCG00000004352	ddx61	94	52.995	Lepisosteus_oculatus
ENSFHEG00000015487	-	100	91.429	ENSMAMG00000005559	-	100	91.429	Mastacembelus_armatus
ENSFHEG00000015487	-	97	88.000	ENSMAMG00000005321	ddx61	97	88.000	Mastacembelus_armatus
ENSFHEG00000015487	-	100	93.252	ENSMZEG00005026268	-	100	93.252	Maylandia_zebra
ENSFHEG00000015487	-	98	86.392	ENSMZEG00005003556	ddx61	99	86.392	Maylandia_zebra
ENSFHEG00000015487	-	96	86.567	ENSMMOG00000007415	ddx61	97	86.567	Mola_mola
ENSFHEG00000015487	-	100	82.618	ENSMMOG00000013694	-	100	82.618	Mola_mola
ENSFHEG00000015487	-	73	76.487	ENSMMOG00000008825	-	92	76.487	Mola_mola
ENSFHEG00000015487	-	100	90.798	ENSMALG00000013817	-	100	90.798	Monopterus_albus
ENSFHEG00000015487	-	97	81.839	ENSMALG00000013776	ddx61	96	81.655	Monopterus_albus
ENSFHEG00000015487	-	100	93.187	ENSNBRG00000015075	-	100	93.187	Neolamprologus_brichardi
ENSFHEG00000015487	-	98	85.268	ENSNBRG00000015800	ddx61	99	85.268	Neolamprologus_brichardi
ENSFHEG00000015487	-	98	86.279	ENSONIG00000011418	ddx61	99	86.279	Oreochromis_niloticus
ENSFHEG00000015487	-	100	93.456	ENSONIG00000013748	-	100	93.456	Oreochromis_niloticus
ENSFHEG00000015487	-	100	90.184	ENSORLG00000009178	-	100	90.184	Oryzias_latipes
ENSFHEG00000015487	-	100	90.184	ENSORLG00020015515	-	100	90.184	Oryzias_latipes_hni
ENSFHEG00000015487	-	100	90.184	ENSORLG00015006764	-	100	90.184	Oryzias_latipes_hsok
ENSFHEG00000015487	-	96	83.475	ENSOMEG00000022326	-	99	83.475	Oryzias_melastigma
ENSFHEG00000015487	-	96	90.336	ENSPKIG00000024264	ddx61	98	89.813	Paramormyrops_kingsleyae
ENSFHEG00000015487	-	100	87.611	ENSPMGG00000013355	-	100	87.611	Periophthalmus_magnuspinnatus
ENSFHEG00000015487	-	100	96.473	ENSPFOG00000005750	-	100	96.473	Poecilia_formosa
ENSFHEG00000015487	-	100	96.473	ENSPLAG00000000403	-	100	96.473	Poecilia_latipinna
ENSFHEG00000015487	-	100	96.480	ENSPMEG00000023737	-	100	96.480	Poecilia_mexicana
ENSFHEG00000015487	-	100	93.252	ENSPNYG00000003986	-	100	93.252	Pundamilia_nyererei
ENSFHEG00000015487	-	98	80.268	ENSPNYG00000015045	ddx61	99	80.268	Pundamilia_nyererei
ENSFHEG00000015487	-	99	88.391	ENSPNAG00000008742	-	100	88.391	Pygocentrus_nattereri
ENSFHEG00000015487	-	97	85.833	ENSPNAG00000024072	ddx61	99	85.833	Pygocentrus_nattereri
ENSFHEG00000015487	-	96	89.831	ENSSFOG00015021404	ddx61	99	87.910	Scleropages_formosus
ENSFHEG00000015487	-	96	86.752	ENSSMAG00000006591	ddx61	97	86.076	Scophthalmus_maximus
ENSFHEG00000015487	-	100	92.025	ENSSMAG00000001793	-	100	92.025	Scophthalmus_maximus
ENSFHEG00000015487	-	96	89.103	ENSSDUG00000009713	ddx61	99	87.526	Seriola_dumerili
ENSFHEG00000015487	-	100	92.449	ENSSDUG00000007530	-	100	92.449	Seriola_dumerili
ENSFHEG00000015487	-	96	88.913	ENSSLDG00000000132	ddx61	99	87.344	Seriola_lalandi_dorsalis
ENSFHEG00000015487	-	100	92.449	ENSSLDG00000007608	-	100	92.449	Seriola_lalandi_dorsalis
ENSFHEG00000015487	-	100	93.252	ENSSPAG00000013878	-	100	93.252	Stegastes_partitus
ENSFHEG00000015487	-	96	88.248	ENSSPAG00000001578	ddx61	98	87.212	Stegastes_partitus
ENSFHEG00000015487	-	99	87.500	ENSTRUG00000012432	-	99	88.320	Takifugu_rubripes
ENSFHEG00000015487	-	98	89.167	ENSTNIG00000003560	-	100	89.167	Tetraodon_nigroviridis
ENSFHEG00000015487	-	100	86.335	ENSXCOG00000001406	-	100	86.335	Xiphophorus_couchianus
ENSFHEG00000015487	-	100	96.273	ENSXMAG00000016090	-	100	96.273	Xiphophorus_maculatus