EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000015550 (Gene tree)
Gene ID: 105918660
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: 28S ribosomal protein S18c%2C mitochondrial
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4461 bases
Position: chrKN805870.1:209039-213499
Accession: 105918660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000014024	Ribosomal_S18	PF01084.20	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000021716	-	1554	XM_012853789	ENSFHEP00000014024	135 (aa)	XP_012709243	-

Gene Model

Click here to download ENSFHEG00000015550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000015550	mrps18c	95	100.000	ENSFHEG00000018752	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015550	mrps18c	95	63.566	ENSAPOG00000019045	mrps18c	100	63.566	Acanthochromis_polyacanthus
ENSFHEG00000015550	mrps18c	65	76.136	ENSACIG00000020253	mrps18c	87	76.136	Amphilophus_citrinellus
ENSFHEG00000015550	mrps18c	95	63.566	ENSAOCG00000014338	mrps18c	100	63.566	Amphiprion_ocellaris
ENSFHEG00000015550	mrps18c	95	63.566	ENSAPEG00000022956	mrps18c	100	63.566	Amphiprion_percula
ENSFHEG00000015550	mrps18c	64	81.609	ENSAPEG00000023068	-	84	79.775	Amphiprion_percula
ENSFHEG00000015550	mrps18c	95	71.538	ENSATEG00000023417	mrps18c	100	71.538	Anabas_testudineus
ENSFHEG00000015550	mrps18c	78	62.857	ENSAPLG00000012544	-	98	62.857	Anas_platyrhynchos
ENSFHEG00000015550	mrps18c	67	82.418	ENSACLG00000010521	mrps18c	89	82.418	Astatotilapia_calliptera
ENSFHEG00000015550	mrps18c	68	73.913	ENSAMXG00000012238	mrps18c	93	73.913	Astyanax_mexicanus
ENSFHEG00000015550	mrps18c	89	56.452	ENSCPBG00000007783	-	76	56.452	Chrysemys_picta_bellii
ENSFHEG00000015550	mrps18c	76	70.588	ENSCSEG00000000711	mrps18c	99	57.265	Cynoglossus_semilaevis
ENSFHEG00000015550	mrps18c	95	82.031	ENSCVAG00000020169	mrps18c	100	82.031	Cyprinodon_variegatus
ENSFHEG00000015550	mrps18c	89	62.097	ENSDARG00000069624	mrps18c	91	62.097	Danio_rerio
ENSFHEG00000015550	mrps18c	79	66.667	ENSELUG00000024603	mrps18c	81	66.667	Esox_lucius
ENSFHEG00000015550	mrps18c	87	57.627	ENSGALG00000023191	MRPS18C	80	57.627	Gallus_gallus
ENSFHEG00000015550	mrps18c	99	80.451	ENSGAFG00000008048	mrps18c	86	80.451	Gambusia_affinis
ENSFHEG00000015550	mrps18c	70	69.149	ENSGAGG00000015144	-	66	69.149	Gopherus_agassizii
ENSFHEG00000015550	mrps18c	95	68.462	ENSHBUG00000002008	mrps18c	100	68.462	Haplochromis_burtoni
ENSFHEG00000015550	mrps18c	84	68.103	ENSHCOG00000013161	mrps18c	88	68.103	Hippocampus_comes
ENSFHEG00000015550	mrps18c	81	62.385	ENSIPUG00000003783	mrps18c	100	62.385	Ictalurus_punctatus
ENSFHEG00000015550	mrps18c	95	76.562	ENSKMAG00000016467	mrps18c	100	76.562	Kryptolebias_marmoratus
ENSFHEG00000015550	mrps18c	95	70.000	ENSLBEG00000021861	mrps18c	100	70.000	Labrus_bergylta
ENSFHEG00000015550	mrps18c	95	70.000	ENSLBEG00000019174	mrps18c	100	70.000	Labrus_bergylta
ENSFHEG00000015550	mrps18c	93	56.818	ENSLACG00000011243	mrps18c	100	56.818	Latimeria_chalumnae
ENSFHEG00000015550	mrps18c	88	59.200	ENSLOCG00000012115	mrps18c	93	59.200	Lepisosteus_oculatus
ENSFHEG00000015550	mrps18c	95	61.940	ENSMAMG00000012386	mrps18c	100	61.940	Mastacembelus_armatus
ENSFHEG00000015550	mrps18c	95	68.462	ENSMZEG00005023278	mrps18c	100	68.462	Maylandia_zebra
ENSFHEG00000015550	mrps18c	67	82.418	ENSMMOG00000011316	mrps18c	69	82.418	Mola_mola
ENSFHEG00000015550	mrps18c	95	68.462	ENSNBRG00000006182	mrps18c	100	68.462	Neolamprologus_brichardi
ENSFHEG00000015550	mrps18c	67	66.667	ENSMEUG00000010972	-	71	66.667	Notamacropus_eugenii
ENSFHEG00000015550	mrps18c	96	67.424	ENSONIG00000012527	mrps18c	99	76.000	Oreochromis_niloticus
ENSFHEG00000015550	mrps18c	95	65.116	ENSORLG00015006869	mrps18c	100	65.116	Oryzias_latipes_hsok
ENSFHEG00000015550	mrps18c	65	73.864	ENSOMEG00000005009	mrps18c	85	73.864	Oryzias_melastigma
ENSFHEG00000015550	mrps18c	76	66.019	ENSPKIG00000021736	mrps18c	75	66.019	Paramormyrops_kingsleyae
ENSFHEG00000015550	mrps18c	67	77.778	ENSPMGG00000002991	mrps18c	91	77.778	Periophthalmus_magnuspinnatus
ENSFHEG00000015550	mrps18c	99	78.195	ENSPFOG00000002351	mrps18c	86	78.195	Poecilia_formosa
ENSFHEG00000015550	mrps18c	95	78.906	ENSPLAG00000015187	mrps18c	100	78.906	Poecilia_latipinna
ENSFHEG00000015550	mrps18c	99	78.947	ENSPMEG00000014488	mrps18c	86	78.947	Poecilia_mexicana
ENSFHEG00000015550	mrps18c	63	84.706	ENSPREG00000012593	mrps18c	87	84.706	Poecilia_reticulata
ENSFHEG00000015550	mrps18c	95	67.692	ENSPNYG00000010654	mrps18c	100	67.692	Pundamilia_nyererei
ENSFHEG00000015550	mrps18c	75	65.347	ENSPNAG00000009350	mrps18c	94	65.347	Pygocentrus_nattereri
ENSFHEG00000015550	mrps18c	95	60.294	ENSSFOG00015019444	mrps18c	100	60.294	Scleropages_formosus
ENSFHEG00000015550	mrps18c	95	71.094	ENSSDUG00000015676	mrps18c	100	71.094	Seriola_dumerili
ENSFHEG00000015550	mrps18c	81	68.333	ENSSLDG00000002034	mrps18c	93	68.333	Seriola_lalandi_dorsalis
ENSFHEG00000015550	mrps18c	67	63.736	ENSSPUG00000013990	-	66	63.736	Sphenodon_punctatus
ENSFHEG00000015550	mrps18c	94	62.500	ENSSPAG00000008687	mrps18c	99	62.500	Stegastes_partitus
ENSFHEG00000015550	mrps18c	95	61.538	ENSTRUG00000024403	mrps18c	100	61.538	Takifugu_rubripes
ENSFHEG00000015550	mrps18c	95	66.923	ENSTNIG00000005674	mrps18c	100	66.923	Tetraodon_nigroviridis
ENSFHEG00000015550	mrps18c	79	56.897	ENSXETG00000027597	mrps18c	89	56.897	Xenopus_tropicalis
ENSFHEG00000015550	mrps18c	96	73.846	ENSXCOG00000016208	mrps18c	87	86.207	Xiphophorus_couchianus
ENSFHEG00000015550	mrps18c	96	82.308	ENSXMAG00000012555	mrps18c	84	82.308	Xiphophorus_maculatus