EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000015835 (Gene tree)
Gene ID: 105918637
Gene Symbol: -
Alias: -
Full Name: H/ACA ribonucleoprotein complex non-core subunit NAF1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 18319 bases
Position: chrKN805868.1:144309-162627
Accession: 105918637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000014293	Gar1	PF04410.14	8e-44	1	1
ENSFHEP00000014286	Gar1	PF04410.14	2.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000022048	-	1377	-	ENSFHEP00000014286	458 (aa)	-	-
ENSFHET00000022079	-	4288	XM_012853762	ENSFHEP00000014293	467 (aa)	XP_012709216	A0A146NUK0

Gene Model

Click here to download ENSFHEG00000015835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000015835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000015835	-	63	61.442	ENSAPOG00000007663	-	86	59.195	Acanthochromis_polyacanthus
ENSFHEG00000015835	-	62	63.608	ENSAOCG00000003518	-	84	62.798	Amphiprion_ocellaris
ENSFHEG00000015835	-	62	63.924	ENSAPEG00000004453	-	83	63.095	Amphiprion_percula
ENSFHEG00000015835	-	93	51.502	ENSATEG00000003514	-	77	50.585	Anabas_testudineus
ENSFHEG00000015835	-	54	41.577	ENSAPLG00000003210	NAF1	70	44.398	Anas_platyrhynchos
ENSFHEG00000015835	-	54	44.604	ENSANAG00000025253	NAF1	95	58.537	Aotus_nancymaae
ENSFHEG00000015835	-	76	57.796	ENSACLG00000017092	-	79	48.338	Astatotilapia_calliptera
ENSFHEG00000015835	-	54	43.772	ENSTSYG00000005946	NAF1	95	53.659	Carlito_syrichta
ENSFHEG00000015835	-	58	42.545	ENSCAPG00000017838	NAF1	62	47.186	Cavia_aperea
ENSFHEG00000015835	-	54	43.885	ENSCCAG00000030023	NAF1	98	58.537	Cebus_capucinus
ENSFHEG00000015835	-	54	44.643	ENSCLAG00000017209	NAF1	51	47.479	Chinchilla_lanigera
ENSFHEG00000015835	-	51	30.120	ENSCING00000023345	-	53	43.846	Ciona_intestinalis
ENSFHEG00000015835	-	59	44.027	ENSCGRG00001018484	Naf1	52	43.621	Cricetulus_griseus_chok1gshd
ENSFHEG00000015835	-	59	44.027	ENSCGRG00000001742	Naf1	57	53.769	Cricetulus_griseus_crigri
ENSFHEG00000015835	-	79	47.462	ENSCSEG00000010914	-	51	47.843	Cynoglossus_semilaevis
ENSFHEG00000015835	-	63	68.259	ENSCVAG00000003483	-	76	68.724	Cyprinodon_variegatus
ENSFHEG00000015835	-	59	43.098	ENSDORG00000011327	Naf1	54	45.528	Dipodomys_ordii
ENSFHEG00000015835	-	57	42.491	ENSFDAG00000007497	NAF1	52	48.319	Fukomys_damarensis
ENSFHEG00000015835	-	96	66.951	ENSGAFG00000017883	-	83	68.735	Gambusia_affinis
ENSFHEG00000015835	-	58	42.807	ENSHGLG00000014899	NAF1	54	46.816	Heterocephalus_glaber_female
ENSFHEG00000015835	-	58	42.807	ENSHGLG00100007507	NAF1	54	46.816	Heterocephalus_glaber_male
ENSFHEG00000015835	-	58	44.014	ENSJJAG00000012147	-	64	50.435	Jaculus_jaculus
ENSFHEG00000015835	-	95	51.440	ENSKMAG00000005434	-	88	53.394	Kryptolebias_marmoratus
ENSFHEG00000015835	-	61	63.245	ENSLBEG00000020414	-	55	68.376	Labrus_bergylta
ENSFHEG00000015835	-	63	63.455	ENSMAMG00000003269	-	98	65.636	Mastacembelus_armatus
ENSFHEG00000015835	-	76	58.108	ENSMZEG00005005830	-	83	48.338	Maylandia_zebra
ENSFHEG00000015835	-	56	40.484	ENSMICG00000038661	NAF1	95	51.220	Microcebus_murinus
ENSFHEG00000015835	-	57	45.333	ENSMMOG00000016895	-	52	48.729	Mola_mola
ENSFHEG00000015835	-	93	50.000	ENSMALG00000018482	-	89	51.025	Monopterus_albus
ENSFHEG00000015835	-	58	42.908	MGP_PahariEiJ_G0021563	-	51	47.012	Mus_pahari
ENSFHEG00000015835	-	56	42.808	ENSMLUG00000004627	NAF1	51	46.000	Myotis_lucifugus
ENSFHEG00000015835	-	54	45.035	ENSODEG00000006528	NAF1	53	48.739	Octodon_degus
ENSFHEG00000015835	-	63	61.333	ENSONIG00000001826	-	74	64.062	Oreochromis_niloticus
ENSFHEG00000015835	-	57	57.244	ENSOMEG00000021322	-	86	46.774	Oryzias_melastigma
ENSFHEG00000015835	-	58	42.553	ENSOARG00000013716	NAF1	50	45.887	Ovis_aries
ENSFHEG00000015835	-	56	44.444	ENSPANG00000015574	NAF1	98	58.537	Papio_anubis
ENSFHEG00000015835	-	69	53.927	ENSPSIG00000006545	NAF1	72	44.097	Pelodiscus_sinensis
ENSFHEG00000015835	-	59	44.068	ENSPEMG00000014321	Naf1	63	47.934	Peromyscus_maniculatus_bairdii
ENSFHEG00000015835	-	96	69.574	ENSPFOG00000010705	-	86	68.810	Poecilia_formosa
ENSFHEG00000015835	-	96	69.787	ENSPLAG00000002200	-	86	69.048	Poecilia_latipinna
ENSFHEG00000015835	-	96	71.247	ENSPMEG00000004437	-	86	69.267	Poecilia_mexicana
ENSFHEG00000015835	-	96	69.787	ENSPREG00000022551	-	86	69.048	Poecilia_reticulata
ENSFHEG00000015835	-	76	50.543	ENSPNYG00000021456	-	51	74.214	Pundamilia_nyererei
ENSFHEG00000015835	-	56	46.212	ENSPNAG00000001219	naf1	55	47.170	Pygocentrus_nattereri
ENSFHEG00000015835	-	57	44.170	ENSRNOG00000026403	Naf1	61	46.586	Rattus_norvegicus
ENSFHEG00000015835	-	57	44.521	ENSRBIG00000030027	NAF1	98	58.537	Rhinopithecus_bieti
ENSFHEG00000015835	-	56	44.444	ENSRROG00000040912	NAF1	98	58.537	Rhinopithecus_roxellana
ENSFHEG00000015835	-	56	43.103	ENSSBOG00000002085	NAF1	98	60.976	Saimiri_boliviensis_boliviensis
ENSFHEG00000015835	-	61	56.190	ENSSMAG00000015529	-	64	60.920	Scophthalmus_maximus
ENSFHEG00000015835	-	65	61.801	ENSSDUG00000005987	-	85	61.143	Seriola_dumerili
ENSFHEG00000015835	-	50	60.078	ENSSLDG00000019761	-	57	59.176	Seriola_lalandi_dorsalis
ENSFHEG00000015835	-	50	45.238	ENSSPUG00000004087	NAF1	56	60.366	Sphenodon_punctatus
ENSFHEG00000015835	-	54	44.404	ENSSSCG00000008887	NAF1	51	46.610	Sus_scrofa
ENSFHEG00000015835	-	61	59.170	ENSTRUG00000011908	-	67	63.525	Takifugu_rubripes
ENSFHEG00000015835	-	54	41.727	ENSTTRG00000010106	NAF1	52	44.681	Tursiops_truncatus
ENSFHEG00000015835	-	63	70.990	ENSXCOG00000013058	-	76	72.951	Xiphophorus_couchianus
ENSFHEG00000015835	-	96	67.797	ENSXMAG00000011494	-	87	69.668	Xiphophorus_maculatus