EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000016276 (Gene tree)
Gene ID: 105938296
Gene Symbol: -
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: regulator of nonsense transcripts 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 18511 bases
Position: chrKN811540.1:773455-791965
Accession: 105938296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000030731	UPF1_Zn_bind	PF09416.10	2.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000022525	-	2976	XM_021307284	ENSFHEP00000030731	991 (aa)	XP_021162959	-

Gene Model

Click here to download ENSFHEG00000016276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000016276	-	96	92.519	ENSFHEG00000006428	upf1	86	92.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016276	-	96	95.477	ENSG00000005007	UPF1	85	95.477	Homo_sapiens
ENSFHEG00000016276	-	96	94.763	ENSAPOG00000023773	upf1	87	94.763	Acanthochromis_polyacanthus
ENSFHEG00000016276	-	96	99.093	ENSAPOG00000010916	-	86	99.093	Acanthochromis_polyacanthus
ENSFHEG00000016276	-	96	94.011	ENSAMEG00000011474	UPF1	85	93.829	Ailuropoda_melanoleuca
ENSFHEG00000016276	-	96	94.514	ENSACIG00000019949	upf1	86	94.514	Amphilophus_citrinellus
ENSFHEG00000016276	-	94	97.650	ENSACIG00000010985	-	91	97.650	Amphilophus_citrinellus
ENSFHEG00000016276	-	96	99.274	ENSAOCG00000006352	-	91	99.274	Amphiprion_ocellaris
ENSFHEG00000016276	-	96	94.763	ENSAOCG00000018519	upf1	87	94.763	Amphiprion_ocellaris
ENSFHEG00000016276	-	96	94.763	ENSAPEG00000016344	upf1	87	94.763	Amphiprion_percula
ENSFHEG00000016276	-	96	99.093	ENSAPEG00000006292	-	91	99.093	Amphiprion_percula
ENSFHEG00000016276	-	96	94.514	ENSATEG00000017867	upf1	87	94.514	Anabas_testudineus
ENSFHEG00000016276	-	96	98.548	ENSATEG00000016606	-	86	98.548	Anabas_testudineus
ENSFHEG00000016276	-	96	94.192	ENSAPLG00000009175	UPF1	91	94.011	Anas_platyrhynchos
ENSFHEG00000016276	-	97	93.829	ENSANAG00000024107	UPF1	87	93.648	Aotus_nancymaae
ENSFHEG00000016276	-	96	98.185	ENSACLG00000022630	-	86	98.185	Astatotilapia_calliptera
ENSFHEG00000016276	-	96	94.514	ENSACLG00000007181	upf1	86	94.514	Astatotilapia_calliptera
ENSFHEG00000016276	-	96	94.203	ENSAMXG00000042187	upf1	86	94.565	Astyanax_mexicanus
ENSFHEG00000016276	-	96	94.011	ENSBTAG00000020922	UPF1	85	93.829	Bos_taurus
ENSFHEG00000016276	-	92	49.817	WBGene00004880	smg-2	85	49.817	Caenorhabditis_elegans
ENSFHEG00000016276	-	96	93.829	ENSCJAG00000019627	UPF1	85	93.648	Callithrix_jacchus
ENSFHEG00000016276	-	96	94.011	ENSCAFG00000014578	UPF1	85	93.829	Canis_familiaris
ENSFHEG00000016276	-	96	94.763	ENSCAFG00020012347	UPF1	85	94.763	Canis_lupus_dingo
ENSFHEG00000016276	-	96	94.763	ENSCHIG00000011018	UPF1	85	94.763	Capra_hircus
ENSFHEG00000016276	-	96	93.648	ENSTSYG00000008877	UPF1	89	93.466	Carlito_syrichta
ENSFHEG00000016276	-	96	93.466	ENSCAPG00000005758	UPF1	87	93.285	Cavia_aperea
ENSFHEG00000016276	-	95	93.466	ENSCPOG00000025463	UPF1	86	93.317	Cavia_porcellus
ENSFHEG00000016276	-	96	95.477	ENSCCAG00000032175	UPF1	85	95.477	Cebus_capucinus
ENSFHEG00000016276	-	95	93.829	ENSCATG00000040306	UPF1	89	93.648	Cercocebus_atys
ENSFHEG00000016276	-	96	93.829	ENSCLAG00000004037	UPF1	91	93.648	Chinchilla_lanigera
ENSFHEG00000016276	-	96	95.477	ENSCSAG00000005276	UPF1	85	95.477	Chlorocebus_sabaeus
ENSFHEG00000016276	-	96	94.059	ENSCPBG00000012513	UPF1	86	94.059	Chrysemys_picta_bellii
ENSFHEG00000016276	-	68	87.625	ENSCING00000021399	-	80	87.625	Ciona_intestinalis
ENSFHEG00000016276	-	95	76.215	ENSCSAVG00000006533	-	85	76.215	Ciona_savignyi
ENSFHEG00000016276	-	96	93.829	ENSCANG00000029819	UPF1	89	93.648	Colobus_angolensis_palliatus
ENSFHEG00000016276	-	96	94.975	ENSCGRG00001021067	Upf1	85	94.975	Cricetulus_griseus_chok1gshd
ENSFHEG00000016276	-	96	92.922	ENSCGRG00000013480	Upf1	90	92.740	Cricetulus_griseus_crigri
ENSFHEG00000016276	-	96	97.278	ENSCSEG00000016159	-	86	97.278	Cynoglossus_semilaevis
ENSFHEG00000016276	-	96	94.514	ENSCSEG00000017239	upf1	86	94.514	Cynoglossus_semilaevis
ENSFHEG00000016276	-	96	99.252	ENSCVAG00000010561	upf1	86	99.252	Cyprinodon_variegatus
ENSFHEG00000016276	-	96	94.030	ENSDARG00000016302	upf1	86	94.030	Danio_rerio
ENSFHEG00000016276	-	96	92.494	ENSDORG00000009984	Upf1	87	92.494	Dipodomys_ordii
ENSFHEG00000016276	-	79	78.261	FBgn0030354	Upf1	68	76.980	Drosophila_melanogaster
ENSFHEG00000016276	-	96	94.763	ENSEASG00005006549	UPF1	85	94.763	Equus_asinus_asinus
ENSFHEG00000016276	-	96	94.763	ENSECAG00000010639	UPF1	85	94.763	Equus_caballus
ENSFHEG00000016276	-	96	94.279	ENSELUG00000020917	upf1	87	94.279	Esox_lucius
ENSFHEG00000016276	-	96	94.349	ENSELUG00000012916	-	87	94.349	Esox_lucius
ENSFHEG00000016276	-	96	94.011	ENSFCAG00000009757	UPF1	85	93.829	Felis_catus
ENSFHEG00000016276	-	96	94.074	ENSFALG00000009312	UPF1	88	93.842	Ficedula_albicollis
ENSFHEG00000016276	-	96	93.648	ENSFDAG00000014816	UPF1	91	93.466	Fukomys_damarensis
ENSFHEG00000016276	-	96	95.644	ENSGMOG00000007541	upf1	87	95.644	Gadus_morhua
ENSFHEG00000016276	-	96	95.012	ENSGALG00000003220	UPF1	85	95.012	Gallus_gallus
ENSFHEG00000016276	-	62	94.660	ENSGAFG00000015443	-	74	94.684	Gambusia_affinis
ENSFHEG00000016276	-	96	99.002	ENSGAFG00000004831	upf1	86	99.002	Gambusia_affinis
ENSFHEG00000016276	-	96	95.012	ENSGAGG00000022217	UPF1	86	95.012	Gopherus_agassizii
ENSFHEG00000016276	-	96	95.025	ENSGGOG00000002608	UPF1	90	95.025	Gorilla_gorilla
ENSFHEG00000016276	-	81	97.727	ENSHBUG00000014694	upf1	80	97.727	Haplochromis_burtoni
ENSFHEG00000016276	-	81	100.000	ENSHBUG00000008939	upf1	80	100.000	Haplochromis_burtoni
ENSFHEG00000016276	-	96	93.285	ENSHGLG00000010900	UPF1	85	93.103	Heterocephalus_glaber_female
ENSFHEG00000016276	-	96	92.910	ENSHGLG00100005904	UPF1	89	92.910	Heterocephalus_glaber_male
ENSFHEG00000016276	-	96	96.739	ENSHCOG00000008918	upf1	90	97.135	Hippocampus_comes
ENSFHEG00000016276	-	96	94.279	ENSIPUG00000005108	UPF1	86	94.384	Ictalurus_punctatus
ENSFHEG00000016276	-	96	95.489	ENSSTOG00000009196	UPF1	85	95.477	Ictidomys_tridecemlineatus
ENSFHEG00000016276	-	96	92.559	ENSJJAG00000023151	Upf1	85	92.421	Jaculus_jaculus
ENSFHEG00000016276	-	96	98.556	ENSKMAG00000004962	upf1	87	98.556	Kryptolebias_marmoratus
ENSFHEG00000016276	-	96	94.264	ENSLBEG00000014862	upf1	87	94.264	Labrus_bergylta
ENSFHEG00000016276	-	96	98.367	ENSLBEG00000027848	-	86	98.367	Labrus_bergylta
ENSFHEG00000016276	-	61	94.555	ENSLACG00000008482	UPF1	87	94.555	Latimeria_chalumnae
ENSFHEG00000016276	-	96	95.281	ENSLOCG00000002072	upf1	95	88.447	Lepisosteus_oculatus
ENSFHEG00000016276	-	96	92.740	ENSLAFG00000014963	UPF1	85	92.559	Loxodonta_africana
ENSFHEG00000016276	-	96	93.829	ENSMFAG00000037748	UPF1	85	93.648	Macaca_fascicularis
ENSFHEG00000016276	-	96	93.829	ENSMMUG00000023286	UPF1	85	93.648	Macaca_mulatta
ENSFHEG00000016276	-	96	93.829	ENSMNEG00000000046	UPF1	85	93.648	Macaca_nemestrina
ENSFHEG00000016276	-	96	93.829	ENSMLEG00000028404	UPF1	91	93.648	Mandrillus_leucophaeus
ENSFHEG00000016276	-	96	98.367	ENSMAMG00000006231	-	86	98.367	Mastacembelus_armatus
ENSFHEG00000016276	-	96	95.012	ENSMAMG00000006229	upf1	87	95.012	Mastacembelus_armatus
ENSFHEG00000016276	-	96	94.514	ENSMZEG00005003489	upf1	87	94.514	Maylandia_zebra
ENSFHEG00000016276	-	96	98.185	ENSMZEG00005016386	-	86	98.185	Maylandia_zebra
ENSFHEG00000016276	-	96	93.297	ENSMGAG00000004745	UPF1	91	93.116	Meleagris_gallopavo
ENSFHEG00000016276	-	96	92.922	ENSMAUG00000011398	Upf1	86	92.740	Mesocricetus_auratus
ENSFHEG00000016276	-	96	95.477	ENSMICG00000001659	UPF1	85	95.477	Microcebus_murinus
ENSFHEG00000016276	-	96	92.922	ENSMOCG00000005699	Upf1	85	92.740	Microtus_ochrogaster
ENSFHEG00000016276	-	96	97.015	ENSMMOG00000007537	-	91	97.015	Mola_mola
ENSFHEG00000016276	-	95	94.911	ENSMMOG00000007881	upf1	86	94.911	Mola_mola
ENSFHEG00000016276	-	96	95.250	ENSMODG00000003689	UPF1	86	95.250	Monodelphis_domestica
ENSFHEG00000016276	-	96	94.514	ENSMALG00000000144	upf1	86	94.514	Monopterus_albus
ENSFHEG00000016276	-	96	95.856	ENSMALG00000018100	-	87	95.856	Monopterus_albus
ENSFHEG00000016276	-	96	94.975	MGP_CAROLIEiJ_G0031142	Upf1	85	94.975	Mus_caroli
ENSFHEG00000016276	-	96	94.975	ENSMUSG00000058301	Upf1	85	94.975	Mus_musculus
ENSFHEG00000016276	-	96	94.975	MGP_PahariEiJ_G0021607	Upf1	85	94.975	Mus_pahari
ENSFHEG00000016276	-	96	94.975	MGP_SPRETEiJ_G0032260	Upf1	85	94.975	Mus_spretus
ENSFHEG00000016276	-	96	94.763	ENSMPUG00000015516	UPF1	85	94.763	Mustela_putorius_furo
ENSFHEG00000016276	-	96	94.527	ENSMLUG00000012122	UPF1	85	94.527	Myotis_lucifugus
ENSFHEG00000016276	-	96	92.665	ENSNGAG00000024107	Upf1	85	92.665	Nannospalax_galili
ENSFHEG00000016276	-	96	94.514	ENSNBRG00000000670	upf1	86	94.514	Neolamprologus_brichardi
ENSFHEG00000016276	-	96	98.185	ENSNBRG00000022069	-	91	98.185	Neolamprologus_brichardi
ENSFHEG00000016276	-	96	93.829	ENSNLEG00000006062	UPF1	91	93.648	Nomascus_leucogenys
ENSFHEG00000016276	-	87	89.258	ENSMEUG00000014146	-	77	89.062	Notamacropus_eugenii
ENSFHEG00000016276	-	96	90.381	ENSOPRG00000014018	UPF1	91	89.292	Ochotona_princeps
ENSFHEG00000016276	-	95	93.648	ENSODEG00000012426	UPF1	86	93.466	Octodon_degus
ENSFHEG00000016276	-	96	94.514	ENSONIG00000010452	upf1	87	94.514	Oreochromis_niloticus
ENSFHEG00000016276	-	96	98.367	ENSONIG00000012729	-	86	98.367	Oreochromis_niloticus
ENSFHEG00000016276	-	96	92.948	ENSOANG00000004568	UPF1	85	92.405	Ornithorhynchus_anatinus
ENSFHEG00000016276	-	96	97.822	ENSORLG00000008453	upf1	86	97.822	Oryzias_latipes
ENSFHEG00000016276	-	96	97.822	ENSORLG00020014758	upf1	87	97.822	Oryzias_latipes_hni
ENSFHEG00000016276	-	96	97.822	ENSORLG00015010165	upf1	100	87.638	Oryzias_latipes_hsok
ENSFHEG00000016276	-	96	98.185	ENSOMEG00000003665	upf1	86	98.185	Oryzias_melastigma
ENSFHEG00000016276	-	96	95.477	ENSOGAG00000012866	UPF1	85	95.477	Otolemur_garnettii
ENSFHEG00000016276	-	93	93.191	ENSOARG00000010739	UPF1	86	92.996	Ovis_aries
ENSFHEG00000016276	-	96	93.829	ENSPPAG00000043884	UPF1	87	93.648	Pan_paniscus
ENSFHEG00000016276	-	96	94.011	ENSPPRG00000023470	UPF1	85	93.829	Panthera_pardus
ENSFHEG00000016276	-	96	94.500	ENSPTIG00000010159	UPF1	91	94.500	Panthera_tigris_altaica
ENSFHEG00000016276	-	96	93.829	ENSPTRG00000010721	UPF1	85	93.648	Pan_troglodytes
ENSFHEG00000016276	-	96	93.829	ENSPANG00000008847	UPF1	85	93.648	Papio_anubis
ENSFHEG00000016276	-	87	95.274	ENSPKIG00000006069	upf1	81	96.154	Paramormyrops_kingsleyae
ENSFHEG00000016276	-	68	95.122	ENSPSIG00000009491	UPF1	88	95.122	Pelodiscus_sinensis
ENSFHEG00000016276	-	96	93.516	ENSPMGG00000017327	upf1	86	93.516	Periophthalmus_magnuspinnatus
ENSFHEG00000016276	-	96	92.922	ENSPEMG00000001085	Upf1	85	92.740	Peromyscus_maniculatus_bairdii
ENSFHEG00000016276	-	96	88.889	ENSPMAG00000001206	upf1	86	88.889	Petromyzon_marinus
ENSFHEG00000016276	-	96	95.262	ENSPCIG00000006156	UPF1	85	95.262	Phascolarctos_cinereus
ENSFHEG00000016276	-	96	93.267	ENSPLAG00000018155	-	87	93.267	Poecilia_latipinna
ENSFHEG00000016276	-	96	99.002	ENSPLAG00000016232	-	86	99.002	Poecilia_latipinna
ENSFHEG00000016276	-	96	98.756	ENSPMEG00000016319	-	86	98.756	Poecilia_mexicana
ENSFHEG00000016276	-	96	93.267	ENSPMEG00000011443	-	86	93.267	Poecilia_mexicana
ENSFHEG00000016276	-	96	93.267	ENSPREG00000009940	upf1	86	93.267	Poecilia_reticulata
ENSFHEG00000016276	-	96	99.002	ENSPREG00000011247	-	86	99.002	Poecilia_reticulata
ENSFHEG00000016276	-	96	92.665	ENSPPYG00000009752	UPF1	84	92.665	Pongo_abelii
ENSFHEG00000016276	-	73	98.653	ENSPCAG00000012962	UPF1	65	98.653	Procavia_capensis
ENSFHEG00000016276	-	96	93.829	ENSPCOG00000023813	UPF1	85	93.648	Propithecus_coquereli
ENSFHEG00000016276	-	60	100.000	ENSPVAG00000003183	UPF1	53	100.000	Pteropus_vampyrus
ENSFHEG00000016276	-	96	94.514	ENSPNYG00000003694	upf1	87	94.514	Pundamilia_nyererei
ENSFHEG00000016276	-	96	98.367	ENSPNYG00000016731	-	86	98.367	Pundamilia_nyererei
ENSFHEG00000016276	-	96	93.841	ENSPNAG00000025614	upf1	86	94.203	Pygocentrus_nattereri
ENSFHEG00000016276	-	96	94.975	ENSRNOG00000020134	Upf1	85	94.975	Rattus_norvegicus
ENSFHEG00000016276	-	96	93.829	ENSRBIG00000013894	UPF1	88	96.310	Rhinopithecus_bieti
ENSFHEG00000016276	-	96	93.829	ENSRROG00000040935	UPF1	88	96.310	Rhinopithecus_roxellana
ENSFHEG00000016276	-	74	62.899	YMR080C	NAM7	77	62.899	Saccharomyces_cerevisiae
ENSFHEG00000016276	-	95	93.829	ENSSBOG00000023632	UPF1	87	93.648	Saimiri_boliviensis_boliviensis
ENSFHEG00000016276	-	96	93.490	ENSSHAG00000010499	UPF1	91	93.309	Sarcophilus_harrisii
ENSFHEG00000016276	-	96	95.274	ENSSFOG00015021095	upf1	91	95.025	Scleropages_formosus
ENSFHEG00000016276	-	96	94.514	ENSSMAG00000005055	upf1	87	94.514	Scophthalmus_maximus
ENSFHEG00000016276	-	96	98.548	ENSSMAG00000021018	-	86	98.548	Scophthalmus_maximus
ENSFHEG00000016276	-	96	94.763	ENSSDUG00000013320	upf1	87	94.763	Seriola_dumerili
ENSFHEG00000016276	-	96	99.093	ENSSDUG00000009629	-	86	99.093	Seriola_dumerili
ENSFHEG00000016276	-	96	99.093	ENSSLDG00000006878	-	86	99.093	Seriola_lalandi_dorsalis
ENSFHEG00000016276	-	96	94.763	ENSSLDG00000020868	upf1	87	94.763	Seriola_lalandi_dorsalis
ENSFHEG00000016276	-	96	94.763	ENSSPUG00000010538	UPF1	86	94.763	Sphenodon_punctatus
ENSFHEG00000016276	-	96	98.548	ENSSPAG00000011521	-	86	98.548	Stegastes_partitus
ENSFHEG00000016276	-	96	91.336	ENSSPAG00000000003	upf1	86	91.289	Stegastes_partitus
ENSFHEG00000016276	-	96	94.763	ENSSSCG00000039301	UPF1	91	94.750	Sus_scrofa
ENSFHEG00000016276	-	76	90.843	ENSTGUG00000001057	UPF1	75	100.000	Taeniopygia_guttata
ENSFHEG00000016276	-	96	96.758	ENSTRUG00000005131	-	86	96.758	Takifugu_rubripes
ENSFHEG00000016276	-	96	94.015	ENSTRUG00000000150	upf1	87	94.015	Takifugu_rubripes
ENSFHEG00000016276	-	96	94.011	ENSTTRG00000011544	UPF1	85	93.829	Tursiops_truncatus
ENSFHEG00000016276	-	96	94.514	ENSUAMG00000007093	UPF1	85	94.514	Ursus_americanus
ENSFHEG00000016276	-	96	94.500	ENSUMAG00000006652	UPF1	90	97.205	Ursus_maritimus
ENSFHEG00000016276	-	96	94.763	ENSVVUG00000007797	UPF1	85	94.763	Vulpes_vulpes
ENSFHEG00000016276	-	96	92.233	ENSXETG00000013602	upf1	84	92.233	Xenopus_tropicalis
ENSFHEG00000016276	-	92	92.768	ENSXCOG00000015275	-	83	92.768	Xiphophorus_couchianus
ENSFHEG00000016276	-	95	98.711	ENSXCOG00000005764	-	91	98.711	Xiphophorus_couchianus
ENSFHEG00000016276	-	96	93.017	ENSXMAG00000001703	-	86	93.017	Xiphophorus_maculatus
ENSFHEG00000016276	-	96	98.548	ENSXMAG00000002540	-	86	98.548	Xiphophorus_maculatus