EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000016314 (Gene tree)
Gene ID: 105922342
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 52370 bases
Position: chrKN806595.1:687-53056
Accession: 105922342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000014717	Nop52	PF05997.12	4.6e-53	1	1
ENSFHEP00000030794	Nop52	PF05997.12	4.8e-53	1	1
ENSFHEP00000014738	Nop52	PF05997.12	5.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000022632	-	3750	-	ENSFHEP00000014717	817 (aa)	-	-
ENSFHET00000022624	-	4002	XM_021313992	ENSFHEP00000030794	838 (aa)	XP_021169667	-
ENSFHET00000022657	-	4170	XM_012858235	ENSFHEP00000014738	894 (aa)	XP_012713689	-

Gene Model

Click here to download ENSFHEG00000016314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016314	-	61	44.144	ENSG00000160208	RRP1B	64	44.144	Homo_sapiens
ENSFHEG00000016314	-	98	68.317	ENSAPOG00000007490	-	96	48.943	Acanthochromis_polyacanthus
ENSFHEG00000016314	-	51	51.579	ENSAMEG00000011401	RRP1B	56	52.632	Ailuropoda_melanoleuca
ENSFHEG00000016314	-	91	82.500	ENSAOCG00000017894	-	91	70.640	Amphiprion_ocellaris
ENSFHEG00000016314	-	98	48.837	ENSAPEG00000024150	-	96	49.257	Amphiprion_percula
ENSFHEG00000016314	-	61	69.822	ENSATEG00000005045	-	67	66.234	Anabas_testudineus
ENSFHEG00000016314	-	50	66.667	ENSAPLG00000004310	RRP1B	56	67.273	Anas_platyrhynchos
ENSFHEG00000016314	-	56	49.041	ENSACAG00000017851	RRP1B	59	49.041	Anolis_carolinensis
ENSFHEG00000016314	-	61	44.377	ENSANAG00000034889	RRP1B	64	44.377	Aotus_nancymaae
ENSFHEG00000016314	-	58	41.333	ENSBTAG00000017418	RRP1B	66	42.963	Bos_taurus
ENSFHEG00000016314	-	74	37.819	ENSCJAG00000017077	RRP1B	69	43.243	Callithrix_jacchus
ENSFHEG00000016314	-	51	51.579	ENSCAFG00000010621	RRP1B	58	50.526	Canis_familiaris
ENSFHEG00000016314	-	53	47.826	ENSCAFG00020018901	RRP1B	61	44.853	Canis_lupus_dingo
ENSFHEG00000016314	-	55	44.514	ENSCHIG00000021519	RRP1B	65	43.382	Capra_hircus
ENSFHEG00000016314	-	74	41.333	ENSCPOG00000002396	RRP1B	100	33.626	Cavia_porcellus
ENSFHEG00000016314	-	71	44.073	ENSCCAG00000029384	RRP1B	77	44.073	Cebus_capucinus
ENSFHEG00000016314	-	50	53.684	ENSCATG00000017423	RRP1B	59	45.588	Cercocebus_atys
ENSFHEG00000016314	-	61	51.613	ENSCLAG00000005622	RRP1B	70	51.613	Chinchilla_lanigera
ENSFHEG00000016314	-	50	56.842	ENSCSAG00000007961	RRP1B	59	47.794	Chlorocebus_sabaeus
ENSFHEG00000016314	-	51	49.697	ENSCPBG00000010310	RRP1B	62	48.725	Chrysemys_picta_bellii
ENSFHEG00000016314	-	50	54.737	ENSCANG00000040952	RRP1B	59	45.588	Colobus_angolensis_palliatus
ENSFHEG00000016314	-	50	54.082	ENSCGRG00001010889	-	58	52.041	Cricetulus_griseus_chok1gshd
ENSFHEG00000016314	-	50	54.082	ENSCGRG00001023882	-	58	52.041	Cricetulus_griseus_chok1gshd
ENSFHEG00000016314	-	50	54.082	ENSCGRG00000001553	Rrp1b	60	52.041	Cricetulus_griseus_crigri
ENSFHEG00000016314	-	61	60.263	ENSCSEG00000020711	-	84	61.619	Cynoglossus_semilaevis
ENSFHEG00000016314	-	50	49.474	ENSDNOG00000032774	RRP1B	59	43.636	Dasypus_novemcinctus
ENSFHEG00000016314	-	55	38.377	ENSDNOG00000019880	RRP1	84	41.058	Dasypus_novemcinctus
ENSFHEG00000016314	-	67	48.421	ENSETEG00000019489	RRP1B	71	50.526	Echinops_telfairi
ENSFHEG00000016314	-	66	44.545	ENSEASG00005001687	RRP1B	70	44.545	Equus_asinus_asinus
ENSFHEG00000016314	-	66	44.242	ENSECAG00000018018	RRP1B	70	44.242	Equus_caballus
ENSFHEG00000016314	-	62	59.947	ENSELUG00000015885	-	81	61.290	Esox_lucius
ENSFHEG00000016314	-	50	51.579	ENSFCAG00000010272	RRP1B	67	41.284	Felis_catus
ENSFHEG00000016314	-	68	38.217	ENSFDAG00000010899	RRP1B	68	48.421	Fukomys_damarensis
ENSFHEG00000016314	-	59	60.725	ENSGMOG00000001953	-	68	60.651	Gadus_morhua
ENSFHEG00000016314	-	61	63.099	ENSGACG00000001438	rrp1	73	65.266	Gasterosteus_aculeatus
ENSFHEG00000016314	-	51	51.064	ENSGAGG00000000375	RRP1B	60	50.284	Gopherus_agassizii
ENSFHEG00000016314	-	61	44.144	ENSGGOG00000012069	RRP1B	64	44.144	Gorilla_gorilla
ENSFHEG00000016314	-	52	48.421	ENSHGLG00000004968	RRP1B	56	48.421	Heterocephalus_glaber_female
ENSFHEG00000016314	-	50	42.029	ENSHGLG00100002232	RRP1B	53	48.421	Heterocephalus_glaber_male
ENSFHEG00000016314	-	61	59.200	ENSHCOG00000018388	-	63	59.200	Hippocampus_comes
ENSFHEG00000016314	-	50	44.118	ENSSTOG00000011790	RRP1B	53	51.579	Ictidomys_tridecemlineatus
ENSFHEG00000016314	-	50	41.722	ENSJJAG00000021279	Rrp1b	57	52.688	Jaculus_jaculus
ENSFHEG00000016314	-	66	69.133	ENSKMAG00000005539	rrp1	84	69.388	Kryptolebias_marmoratus
ENSFHEG00000016314	-	50	46.687	ENSLACG00000017332	-	53	60.656	Latimeria_chalumnae
ENSFHEG00000016314	-	55	54.255	ENSLOCG00000004064	-	74	52.601	Lepisosteus_oculatus
ENSFHEG00000016314	-	67	48.421	ENSLAFG00000000766	RRP1B	88	41.071	Loxodonta_africana
ENSFHEG00000016314	-	50	50.526	ENSMFAG00000039152	RRP1B	59	46.324	Macaca_fascicularis
ENSFHEG00000016314	-	50	49.474	ENSMMUG00000000104	RRP1B	54	49.474	Macaca_mulatta
ENSFHEG00000016314	-	50	48.421	ENSMNEG00000034269	RRP1B	59	44.853	Macaca_nemestrina
ENSFHEG00000016314	-	53	49.265	ENSMLEG00000040044	RRP1B	62	46.324	Mandrillus_leucophaeus
ENSFHEG00000016314	-	87	66.761	ENSMAMG00000007131	-	66	70.170	Mastacembelus_armatus
ENSFHEG00000016314	-	51	55.789	ENSMICG00000004686	RRP1B	55	52.632	Microcebus_murinus
ENSFHEG00000016314	-	50	45.255	ENSMOCG00000001117	Rrp1b	57	54.737	Microtus_ochrogaster
ENSFHEG00000016314	-	53	46.273	ENSMODG00000021033	RRP1B	75	51.579	Monodelphis_domestica
ENSFHEG00000016314	-	55	40.635	MGP_CAROLIEiJ_G0021376	Rrp1b	73	38.983	Mus_caroli
ENSFHEG00000016314	-	50	50.526	MGP_PahariEiJ_G0023695	Rrp1b	54	51.579	Mus_pahari
ENSFHEG00000016314	-	50	42.446	MGP_SPRETEiJ_G0022290	Rrp1b	59	51.579	Mus_spretus
ENSFHEG00000016314	-	51	52.632	ENSMLUG00000007738	RRP1B	59	46.667	Myotis_lucifugus
ENSFHEG00000016314	-	52	46.154	ENSNGAG00000021073	Rrp1b	52	52.688	Nannospalax_galili
ENSFHEG00000016314	-	61	43.844	ENSNLEG00000001490	RRP1B	67	43.844	Nomascus_leucogenys
ENSFHEG00000016314	-	68	63.836	ENSONIG00000004264	rrp1	78	64.754	Oreochromis_niloticus
ENSFHEG00000016314	-	56	42.813	ENSOANG00000006470	RRP1B	61	42.090	Ornithorhynchus_anatinus
ENSFHEG00000016314	-	60	63.144	ENSORLG00020007199	-	61	63.686	Oryzias_latipes_hni
ENSFHEG00000016314	-	50	43.533	ENSOARG00000011314	RRP1B	65	47.368	Ovis_aries
ENSFHEG00000016314	-	66	43.149	ENSPPAG00000035319	RRP1B	67	44.109	Pan_paniscus
ENSFHEG00000016314	-	50	52.632	ENSPPRG00000010356	RRP1B	82	41.692	Panthera_pardus
ENSFHEG00000016314	-	50	52.632	ENSPTIG00000016894	RRP1B	74	44.526	Panthera_tigris_altaica
ENSFHEG00000016314	-	60	44.144	ENSPTRG00000013958	RRP1B	65	44.144	Pan_troglodytes
ENSFHEG00000016314	-	50	50.526	ENSPANG00000011090	RRP1B	59	46.324	Papio_anubis
ENSFHEG00000016314	-	55	57.270	ENSPKIG00000003422	-	63	53.500	Paramormyrops_kingsleyae
ENSFHEG00000016314	-	52	52.410	ENSPSIG00000008152	RRP1B	57	51.289	Pelodiscus_sinensis
ENSFHEG00000016314	-	50	46.763	ENSPEMG00000022490	Rrp1b	84	46.763	Peromyscus_maniculatus_bairdii
ENSFHEG00000016314	-	51	51.961	ENSPCIG00000015513	RRP1B	58	50.980	Phascolarctos_cinereus
ENSFHEG00000016314	-	78	66.094	ENSPFOG00000007424	-	86	65.979	Poecilia_formosa
ENSFHEG00000016314	-	77	64.130	ENSPLAG00000016684	-	89	65.225	Poecilia_latipinna
ENSFHEG00000016314	-	99	63.347	ENSPMEG00000007042	-	91	65.162	Poecilia_mexicana
ENSFHEG00000016314	-	99	56.127	ENSPREG00000015673	-	96	57.540	Poecilia_reticulata
ENSFHEG00000016314	-	61	44.144	ENSPPYG00000011470	RRP1B	64	44.144	Pongo_abelii
ENSFHEG00000016314	-	50	55.789	ENSPCOG00000017927	RRP1B	55	55.789	Propithecus_coquereli
ENSFHEG00000016314	-	66	38.554	ENSPVAG00000001436	RRP1B	71	38.554	Pteropus_vampyrus
ENSFHEG00000016314	-	50	43.382	ENSRNOG00000001194	Rrp1b	70	53.684	Rattus_norvegicus
ENSFHEG00000016314	-	50	55.789	ENSRBIG00000041689	RRP1B	58	46.324	Rhinopithecus_bieti
ENSFHEG00000016314	-	50	55.789	ENSRROG00000031499	RRP1B	59	46.324	Rhinopithecus_roxellana
ENSFHEG00000016314	-	62	40.526	ENSSBOG00000034727	RRP1B	76	43.066	Saimiri_boliviensis_boliviensis
ENSFHEG00000016314	-	50	52.941	ENSSHAG00000017789	RRP1B	55	51.961	Sarcophilus_harrisii
ENSFHEG00000016314	-	58	50.392	ENSSFOG00015003932	-	85	51.323	Scleropages_formosus
ENSFHEG00000016314	-	53	73.276	ENSSMAG00000016847	-	84	69.468	Scophthalmus_maximus
ENSFHEG00000016314	-	51	71.594	ENSSLDG00000002538	-	71	68.766	Seriola_lalandi_dorsalis
ENSFHEG00000016314	-	57	37.370	ENSSARG00000003108	-	67	37.370	Sorex_araneus
ENSFHEG00000016314	-	54	47.664	ENSSPUG00000002834	RRP1B	63	48.387	Sphenodon_punctatus
ENSFHEG00000016314	-	98	49.424	ENSSPAG00000005370	-	97	50.675	Stegastes_partitus
ENSFHEG00000016314	-	53	49.474	ENSSSCG00000021698	RRP1B	67	43.704	Sus_scrofa
ENSFHEG00000016314	-	56	50.000	ENSTBEG00000000422	RRP1B	80	43.575	Tupaia_belangeri
ENSFHEG00000016314	-	52	45.161	ENSTTRG00000000723	RRP1B	63	42.609	Tursiops_truncatus
ENSFHEG00000016314	-	51	52.632	ENSUAMG00000026765	RRP1B	67	43.202	Ursus_americanus
ENSFHEG00000016314	-	54	52.632	ENSUMAG00000025510	RRP1B	93	50.526	Ursus_maritimus
ENSFHEG00000016314	-	50	51.579	ENSVVUG00000024509	RRP1B	63	44.853	Vulpes_vulpes
ENSFHEG00000016314	-	82	70.299	ENSXMAG00000023123	-	94	63.685	Xiphophorus_maculatus