EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000016353 (Gene tree)
Gene ID: -
Gene Symbol: lsm4
Alias: zgc:73057|zgc:77848
Full Name: LSM4 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 530 bases
Position: chrKN811540.1:758957-759486
Accession: ZDB-GENE-040426-1652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000014760	LSM	PF01423.22	8.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000022673	-	180	-	ENSFHEP00000014760	59 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000016353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016353	lsm4	98	91.379	ENSG00000130520	LSM4	81	91.379	Homo_sapiens
ENSFHEG00000016353	lsm4	100	88.136	ENSCATG00000029311	LSM4	83	88.136	Cercocebus_atys
ENSFHEG00000016353	lsm4	100	89.831	ENSCANG00000043686	LSM4	83	89.831	Colobus_angolensis_palliatus
ENSFHEG00000016353	lsm4	100	91.525	ENSGGOG00000012914	-	83	91.525	Gorilla_gorilla
ENSFHEG00000016353	lsm4	80	100.000	ENSHGLG00100007894	LSM4	51	100.000	Heterocephalus_glaber_male
ENSFHEG00000016353	lsm4	100	91.525	ENSMFAG00000031194	LSM4	83	91.525	Macaca_fascicularis
ENSFHEG00000016353	lsm4	100	91.525	ENSMNEG00000042899	LSM4	83	91.525	Macaca_nemestrina
ENSFHEG00000016353	lsm4	100	88.136	ENSMLEG00000027948	LSM4	83	88.136	Mandrillus_leucophaeus
ENSFHEG00000016353	lsm4	100	88.136	ENSPANG00000014399	LSM4	83	88.136	Papio_anubis
ENSFHEG00000016353	lsm4	100	89.831	ENSRBIG00000024717	LSM4	83	89.831	Rhinopithecus_bieti
ENSFHEG00000016353	lsm4	100	89.831	ENSRROG00000045706	LSM4	83	89.831	Rhinopithecus_roxellana