EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000016667 (Gene tree)
Gene ID: 105928024
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 8172 bases
Position: chrKN811318.1:1616760-1624931
Accession: 105928024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000015077	zf-U1	PF06220.12	7.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000023076	-	1359	XM_012865091	ENSFHEP00000015077	112 (aa)	XP_012720545	UPI000644FFC8

Gene Model

Click here to download ENSFHEG00000016667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016667	snrpc	97	99.083	ENSAPOG00000013907	snrpc	74	99.083	Acanthochromis_polyacanthus
ENSFHEG00000016667	snrpc	91	98.039	ENSACIG00000010867	snrpc	72	98.039	Amphilophus_citrinellus
ENSFHEG00000016667	snrpc	97	99.083	ENSAOCG00000021151	snrpc	74	99.083	Amphiprion_ocellaris
ENSFHEG00000016667	snrpc	97	99.083	ENSAPEG00000023221	snrpc	74	99.083	Amphiprion_percula
ENSFHEG00000016667	snrpc	97	99.083	ENSATEG00000025133	snrpc	74	99.083	Anabas_testudineus
ENSFHEG00000016667	snrpc	76	80.000	ENSANAG00000019157	-	52	75.610	Aotus_nancymaae
ENSFHEG00000016667	snrpc	97	100.000	ENSACLG00000000843	snrpc	73	100.000	Astatotilapia_calliptera
ENSFHEG00000016667	snrpc	97	88.235	ENSAMXG00000032641	snrpc	65	88.235	Astyanax_mexicanus
ENSFHEG00000016667	snrpc	64	79.167	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSFHEG00000016667	snrpc	97	99.083	ENSCVAG00000014297	snrpc	73	99.083	Cyprinodon_variegatus
ENSFHEG00000016667	snrpc	97	88.235	ENSDARG00000009871	snrpc	75	88.235	Danio_rerio
ENSFHEG00000016667	snrpc	55	100.000	ENSDNOG00000042403	-	54	100.000	Dasypus_novemcinctus
ENSFHEG00000016667	snrpc	55	93.548	ENSETEG00000008756	-	59	96.667	Echinops_telfairi
ENSFHEG00000016667	snrpc	96	67.797	ENSEEUG00000014633	SNRPC	67	67.797	Erinaceus_europaeus
ENSFHEG00000016667	snrpc	97	96.330	ENSGMOG00000000090	snrpc	75	96.330	Gadus_morhua
ENSFHEG00000016667	snrpc	97	99.083	ENSGAFG00000016115	snrpc	73	99.083	Gambusia_affinis
ENSFHEG00000016667	snrpc	96	98.131	ENSGACG00000004899	snrpc	72	98.131	Gasterosteus_aculeatus
ENSFHEG00000016667	snrpc	97	100.000	ENSHBUG00000011637	snrpc	73	100.000	Haplochromis_burtoni
ENSFHEG00000016667	snrpc	58	100.000	ENSHCOG00000001596	snrpc	57	96.429	Hippocampus_comes
ENSFHEG00000016667	snrpc	97	88.235	ENSIPUG00000024851	snrpc	75	88.235	Ictalurus_punctatus
ENSFHEG00000016667	snrpc	97	100.000	ENSKMAG00000016356	snrpc	74	100.000	Kryptolebias_marmoratus
ENSFHEG00000016667	snrpc	97	99.083	ENSLBEG00000023881	snrpc	73	99.083	Labrus_bergylta
ENSFHEG00000016667	snrpc	97	99.083	ENSMAMG00000003857	snrpc	74	99.083	Mastacembelus_armatus
ENSFHEG00000016667	snrpc	97	100.000	ENSMZEG00005002199	snrpc	73	100.000	Maylandia_zebra
ENSFHEG00000016667	snrpc	95	98.113	ENSMMOG00000013149	snrpc	73	98.113	Mola_mola
ENSFHEG00000016667	snrpc	99	96.396	ENSMALG00000001197	snrpc	76	96.396	Monopterus_albus
ENSFHEG00000016667	snrpc	55	100.000	MGP_SPRETEiJ_G0022221	-	52	100.000	Mus_spretus
ENSFHEG00000016667	snrpc	97	100.000	ENSONIG00000014757	snrpc	73	100.000	Oreochromis_niloticus
ENSFHEG00000016667	snrpc	97	100.000	ENSORLG00000007308	snrpc	75	100.000	Oryzias_latipes
ENSFHEG00000016667	snrpc	96	100.000	ENSORLG00020012607	SNRPC	73	100.000	Oryzias_latipes_hni
ENSFHEG00000016667	snrpc	98	99.091	ENSOMEG00000012014	snrpc	68	99.091	Oryzias_melastigma
ENSFHEG00000016667	snrpc	97	87.395	ENSPKIG00000003136	snrpc	77	87.395	Paramormyrops_kingsleyae
ENSFHEG00000016667	snrpc	94	97.143	ENSPMGG00000022162	snrpc	73	97.143	Periophthalmus_magnuspinnatus
ENSFHEG00000016667	snrpc	97	99.083	ENSPFOG00000015174	snrpc	73	99.083	Poecilia_formosa
ENSFHEG00000016667	snrpc	97	99.083	ENSPLAG00000012311	snrpc	73	99.083	Poecilia_latipinna
ENSFHEG00000016667	snrpc	97	99.083	ENSPMEG00000010274	snrpc	73	99.083	Poecilia_mexicana
ENSFHEG00000016667	snrpc	55	100.000	ENSPPYG00000029902	-	63	100.000	Pongo_abelii
ENSFHEG00000016667	snrpc	75	76.190	ENSPNYG00000004900	snrpc	70	78.505	Pundamilia_nyererei
ENSFHEG00000016667	snrpc	97	88.235	ENSPNAG00000012799	snrpc	75	88.235	Pygocentrus_nattereri
ENSFHEG00000016667	snrpc	97	99.083	ENSSMAG00000008029	snrpc	74	99.083	Scophthalmus_maximus
ENSFHEG00000016667	snrpc	97	99.083	ENSSDUG00000018895	snrpc	60	99.083	Seriola_dumerili
ENSFHEG00000016667	snrpc	97	99.083	ENSSLDG00000005034	snrpc	74	99.083	Seriola_lalandi_dorsalis
ENSFHEG00000016667	snrpc	97	99.083	ENSSPAG00000000914	snrpc	74	99.083	Stegastes_partitus
ENSFHEG00000016667	snrpc	97	97.248	ENSTRUG00000021651	snrpc	73	97.248	Takifugu_rubripes
ENSFHEG00000016667	snrpc	97	86.777	ENSTNIG00000018307	snrpc	75	86.777	Tetraodon_nigroviridis
ENSFHEG00000016667	snrpc	94	95.238	ENSXCOG00000015871	-	74	95.238	Xiphophorus_couchianus
ENSFHEG00000016667	snrpc	97	99.083	ENSXMAG00000017935	snrpc	73	99.083	Xiphophorus_maculatus