EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000016746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 95315 bases
Position: chrKN805733.1:312527-407841
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031070	RRM_1	PF00076.22	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000023152	-	411	-	ENSFHEP00000031070	136 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000016746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000016746	-	71	38.947	ENSFHEG00000010307	ELAVL2	59	38.462
ENSFHEG00000016746	-	59	80.000	ENSFHEG00000005662	rbms1a	74	74.713
ENSFHEG00000016746	-	78	35.526	ENSFHEG00000014715	-	70	36.000
ENSFHEG00000016746	-	59	39.474	ENSFHEG00000004530	elavl4	53	39.474
ENSFHEG00000016746	-	60	36.145	ENSFHEG00000015979	elavl1a	66	36.145
ENSFHEG00000016746	-	79	33.871	ENSFHEG00000001675	elavl3	63	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016746	-	93	87.121	ENSG00000144642	RBMS3	50	77.444	Homo_sapiens
ENSFHEG00000016746	-	93	89.844	ENSAMXG00000043770	-	69	89.062	Astyanax_mexicanus
ENSFHEG00000016746	-	99	85.612	ENSCAFG00020024980	RBMS3	93	85.612	Canis_lupus_dingo
ENSFHEG00000016746	-	93	99.219	ENSCSEG00000014677	-	50	99.219	Cynoglossus_semilaevis
ENSFHEG00000016746	-	93	100.000	ENSCVAG00000022814	-	78	100.000	Cyprinodon_variegatus
ENSFHEG00000016746	-	93	92.969	ENSDARG00000044574	rbms3	60	93.103	Danio_rerio
ENSFHEG00000016746	-	93	97.656	ENSELUG00000006905	-	51	97.656	Esox_lucius
ENSFHEG00000016746	-	71	88.119	ENSGAGG00000023515	-	61	88.119	Gopherus_agassizii
ENSFHEG00000016746	-	93	86.614	MGP_CAROLIEiJ_G0032783	Rbms3	62	86.614	Mus_caroli
ENSFHEG00000016746	-	93	88.976	ENSMUSG00000039607	Rbms3	62	88.976	Mus_musculus
ENSFHEG00000016746	-	93	88.976	MGP_PahariEiJ_G0015650	Rbms3	62	88.976	Mus_pahari
ENSFHEG00000016746	-	93	88.976	MGP_SPRETEiJ_G0033930	Rbms3	62	88.976	Mus_spretus
ENSFHEG00000016746	-	93	78.947	ENSORLG00020022674	RBMS3	54	78.947	Oryzias_latipes_hni
ENSFHEG00000016746	-	93	77.444	ENSORLG00015005509	rbms3	54	79.699	Oryzias_latipes_hsok
ENSFHEG00000016746	-	93	76.866	ENSPCIG00000006106	RBMS3	56	76.866	Phascolarctos_cinereus
ENSFHEG00000016746	-	71	85.149	ENSPLAG00000002862	-	52	93.976	Poecilia_latipinna
ENSFHEG00000016746	-	99	97.761	ENSPLAG00000005161	-	82	97.761	Poecilia_latipinna
ENSFHEG00000016746	-	71	85.149	ENSPMEG00000013853	-	67	93.976	Poecilia_mexicana