EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000016801 (Gene tree)
Gene ID: 105935388
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 20682 bases
Position: chrKN811452.1:1221738-1242419
Accession: 105935388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031047	CPSF_A	PF03178.15	2.8e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000033062	-	4311	XM_021323189	ENSFHEP00000031047	1436 (aa)	XP_021178864	-

Gene Model

Click here to download ENSFHEG00000016801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016801	cpsf1	100	76.738	ENSG00000071894	CPSF1	100	76.875	Homo_sapiens
ENSFHEG00000016801	cpsf1	100	87.382	ENSAPOG00000019621	cpsf1	100	87.584	Acanthochromis_polyacanthus
ENSFHEG00000016801	cpsf1	97	75.923	ENSAMEG00000005557	CPSF1	99	75.852	Ailuropoda_melanoleuca
ENSFHEG00000016801	cpsf1	100	87.958	ENSACIG00000006112	cpsf1	100	87.751	Amphilophus_citrinellus
ENSFHEG00000016801	cpsf1	100	88.316	ENSAOCG00000007120	cpsf1	100	88.316	Amphiprion_ocellaris
ENSFHEG00000016801	cpsf1	100	89.011	ENSAPEG00000005755	cpsf1	100	89.011	Amphiprion_percula
ENSFHEG00000016801	cpsf1	100	86.995	ENSATEG00000011097	cpsf1	100	87.062	Anabas_testudineus
ENSFHEG00000016801	cpsf1	93	73.781	ENSACAG00000009655	CPSF1	100	73.560	Anolis_carolinensis
ENSFHEG00000016801	cpsf1	100	76.722	ENSANAG00000036514	CPSF1	100	76.860	Aotus_nancymaae
ENSFHEG00000016801	cpsf1	99	87.125	ENSACLG00000012231	cpsf1	100	85.943	Astatotilapia_calliptera
ENSFHEG00000016801	cpsf1	100	77.863	ENSAMXG00000008485	cpsf1	100	77.793	Astyanax_mexicanus
ENSFHEG00000016801	cpsf1	100	75.727	ENSBTAG00000008355	CPSF1	100	76.538	Bos_taurus
ENSFHEG00000016801	cpsf1	100	32.824	WBGene00022301	cpsf-1	99	41.243	Caenorhabditis_elegans
ENSFHEG00000016801	cpsf1	100	76.860	ENSCJAG00000021421	CPSF1	100	76.791	Callithrix_jacchus
ENSFHEG00000016801	cpsf1	96	77.477	ENSCAFG00000001600	CPSF1	100	76.813	Canis_familiaris
ENSFHEG00000016801	cpsf1	100	76.960	ENSCAFG00020020821	CPSF1	100	77.098	Canis_lupus_dingo
ENSFHEG00000016801	cpsf1	100	73.535	ENSCHIG00000015833	CPSF1	100	73.329	Capra_hircus
ENSFHEG00000016801	cpsf1	100	77.342	ENSTSYG00000028560	CPSF1	100	77.273	Carlito_syrichta
ENSFHEG00000016801	cpsf1	97	76.228	ENSCAPG00000014921	CPSF1	99	76.157	Cavia_aperea
ENSFHEG00000016801	cpsf1	100	75.620	ENSCPOG00000011448	CPSF1	100	75.551	Cavia_porcellus
ENSFHEG00000016801	cpsf1	100	76.928	ENSCCAG00000037658	CPSF1	100	76.860	Cebus_capucinus
ENSFHEG00000016801	cpsf1	100	76.584	ENSCATG00000037234	CPSF1	99	78.806	Cercocebus_atys
ENSFHEG00000016801	cpsf1	100	77.066	ENSCLAG00000012166	CPSF1	100	76.997	Chinchilla_lanigera
ENSFHEG00000016801	cpsf1	100	76.928	ENSCSAG00000008502	CPSF1	100	76.860	Chlorocebus_sabaeus
ENSFHEG00000016801	cpsf1	99	79.624	ENSCPBG00000018910	CPSF1	96	79.624	Chrysemys_picta_bellii
ENSFHEG00000016801	cpsf1	96	48.851	ENSCING00000000514	-	100	48.452	Ciona_intestinalis
ENSFHEG00000016801	cpsf1	99	49.037	ENSCSAVG00000002293	-	99	50.463	Ciona_savignyi
ENSFHEG00000016801	cpsf1	98	74.278	ENSCANG00000032760	CPSF1	100	75.926	Colobus_angolensis_palliatus
ENSFHEG00000016801	cpsf1	100	76.912	ENSCGRG00001016344	Cpsf1	100	76.844	Cricetulus_griseus_chok1gshd
ENSFHEG00000016801	cpsf1	100	75.121	ENSCGRG00000003118	Cpsf1	100	74.914	Cricetulus_griseus_crigri
ENSFHEG00000016801	cpsf1	100	86.639	ENSCSEG00000013464	cpsf1	100	86.848	Cynoglossus_semilaevis
ENSFHEG00000016801	cpsf1	85	91.667	ENSCVAG00000014059	cpsf1	100	87.500	Cyprinodon_variegatus
ENSFHEG00000016801	cpsf1	100	84.753	ENSDARG00000034178	cpsf1	100	84.684	Danio_rerio
ENSFHEG00000016801	cpsf1	56	79.480	ENSDNOG00000043654	CPSF1	94	79.191	Dasypus_novemcinctus
ENSFHEG00000016801	cpsf1	97	77.461	ENSDORG00000006278	Cpsf1	99	77.603	Dipodomys_ordii
ENSFHEG00000016801	cpsf1	100	44.258	FBgn0024698	Cpsf160	100	44.295	Drosophila_melanogaster
ENSFHEG00000016801	cpsf1	80	79.195	ENSETEG00000006022	CPSF1	83	79.195	Echinops_telfairi
ENSFHEG00000016801	cpsf1	100	77.029	ENSEASG00005010774	CPSF1	100	77.166	Equus_asinus_asinus
ENSFHEG00000016801	cpsf1	100	76.891	ENSECAG00000022209	CPSF1	100	77.029	Equus_caballus
ENSFHEG00000016801	cpsf1	100	76.495	ENSEEUG00000000471	CPSF1	100	76.426	Erinaceus_europaeus
ENSFHEG00000016801	cpsf1	100	83.563	ENSELUG00000012271	cpsf1	100	84.080	Esox_lucius
ENSFHEG00000016801	cpsf1	100	77.135	ENSFDAG00000016060	CPSF1	100	77.066	Fukomys_damarensis
ENSFHEG00000016801	cpsf1	100	85.045	ENSGMOG00000000796	cpsf1	100	85.114	Gadus_morhua
ENSFHEG00000016801	cpsf1	96	90.337	ENSGAFG00000018890	cpsf1	100	90.562	Gambusia_affinis
ENSFHEG00000016801	cpsf1	100	88.759	ENSGACG00000008703	cpsf1	100	88.577	Gasterosteus_aculeatus
ENSFHEG00000016801	cpsf1	100	77.135	ENSGAGG00000004276	CPSF1	98	81.182	Gopherus_agassizii
ENSFHEG00000016801	cpsf1	100	76.775	ENSGGOG00000016185	CPSF1	100	76.912	Gorilla_gorilla
ENSFHEG00000016801	cpsf1	100	89.694	ENSHBUG00000018900	cpsf1	100	89.701	Haplochromis_burtoni
ENSFHEG00000016801	cpsf1	100	77.050	ENSHGLG00000016139	CPSF1	100	76.981	Heterocephalus_glaber_female
ENSFHEG00000016801	cpsf1	100	76.981	ENSHGLG00100009750	CPSF1	100	76.912	Heterocephalus_glaber_male
ENSFHEG00000016801	cpsf1	100	86.391	ENSHCOG00000018509	cpsf1	100	86.391	Hippocampus_comes
ENSFHEG00000016801	cpsf1	100	80.027	ENSIPUG00000011259	cpsf1	100	79.891	Ictalurus_punctatus
ENSFHEG00000016801	cpsf1	97	76.596	ENSSTOG00000009957	CPSF1	99	76.483	Ictidomys_tridecemlineatus
ENSFHEG00000016801	cpsf1	100	77.188	ENSJJAG00000023002	Cpsf1	100	77.119	Jaculus_jaculus
ENSFHEG00000016801	cpsf1	91	94.044	ENSKMAG00000001940	cpsf1	99	94.044	Kryptolebias_marmoratus
ENSFHEG00000016801	cpsf1	100	86.477	ENSLBEG00000003601	cpsf1	100	86.137	Labrus_bergylta
ENSFHEG00000016801	cpsf1	91	72.870	ENSLACG00000000233	CPSF1	100	65.984	Latimeria_chalumnae
ENSFHEG00000016801	cpsf1	100	80.275	ENSLOCG00000008484	cpsf1	100	80.550	Lepisosteus_oculatus
ENSFHEG00000016801	cpsf1	97	77.043	ENSLAFG00000022601	CPSF1	100	76.972	Loxodonta_africana
ENSFHEG00000016801	cpsf1	100	76.584	ENSMFAG00000037013	CPSF1	99	78.806	Macaca_fascicularis
ENSFHEG00000016801	cpsf1	100	76.838	ENSMMUG00000007380	CPSF1	98	79.233	Macaca_mulatta
ENSFHEG00000016801	cpsf1	97	77.104	ENSMNEG00000043564	CPSF1	99	77.247	Macaca_nemestrina
ENSFHEG00000016801	cpsf1	100	76.584	ENSMLEG00000043010	CPSF1	99	78.806	Mandrillus_leucophaeus
ENSFHEG00000016801	cpsf1	100	87.390	ENSMAMG00000003803	cpsf1	100	87.449	Mastacembelus_armatus
ENSFHEG00000016801	cpsf1	100	85.933	ENSMZEG00005001168	cpsf1	100	86.013	Maylandia_zebra
ENSFHEG00000016801	cpsf1	100	77.135	ENSMAUG00000003601	Cpsf1	100	77.066	Mesocricetus_auratus
ENSFHEG00000016801	cpsf1	100	77.119	ENSMICG00000015767	CPSF1	100	77.050	Microcebus_murinus
ENSFHEG00000016801	cpsf1	100	77.050	ENSMOCG00000022758	Cpsf1	100	76.981	Microtus_ochrogaster
ENSFHEG00000016801	cpsf1	100	89.521	ENSMMOG00000021245	cpsf1	100	89.521	Mola_mola
ENSFHEG00000016801	cpsf1	100	77.313	ENSMODG00000010755	CPSF1	100	77.450	Monodelphis_domestica
ENSFHEG00000016801	cpsf1	100	87.635	ENSMALG00000020545	cpsf1	100	87.365	Monopterus_albus
ENSFHEG00000016801	cpsf1	100	77.188	MGP_CAROLIEiJ_G0019936	Cpsf1	100	77.119	Mus_caroli
ENSFHEG00000016801	cpsf1	100	77.119	ENSMUSG00000034022	Cpsf1	100	77.050	Mus_musculus
ENSFHEG00000016801	cpsf1	100	77.188	MGP_PahariEiJ_G0019946	Cpsf1	100	77.119	Mus_pahari
ENSFHEG00000016801	cpsf1	100	77.188	MGP_SPRETEiJ_G0020839	Cpsf1	100	77.119	Mus_spretus
ENSFHEG00000016801	cpsf1	94	77.761	ENSMPUG00000006419	CPSF1	93	77.909	Mustela_putorius_furo
ENSFHEG00000016801	cpsf1	100	77.119	ENSNGAG00000022460	Cpsf1	100	76.981	Nannospalax_galili
ENSFHEG00000016801	cpsf1	100	83.635	ENSNBRG00000000813	cpsf1	100	83.635	Neolamprologus_brichardi
ENSFHEG00000016801	cpsf1	86	65.315	ENSNLEG00000010633	-	100	75.463	Nomascus_leucogenys
ENSFHEG00000016801	cpsf1	82	81.395	ENSMEUG00000014922	CPSF1	85	81.395	Notamacropus_eugenii
ENSFHEG00000016801	cpsf1	60	86.316	ENSOPRG00000004693	-	70	86.316	Ochotona_princeps
ENSFHEG00000016801	cpsf1	100	77.151	ENSODEG00000013995	CPSF1	100	77.082	Octodon_degus
ENSFHEG00000016801	cpsf1	100	88.751	ENSONIG00000007676	cpsf1	100	88.751	Oreochromis_niloticus
ENSFHEG00000016801	cpsf1	58	77.143	ENSOANG00000010716	CPSF1	89	77.143	Ornithorhynchus_anatinus
ENSFHEG00000016801	cpsf1	100	88.618	ENSORLG00000013544	cpsf1	100	88.730	Oryzias_latipes
ENSFHEG00000016801	cpsf1	100	88.618	ENSORLG00020021693	cpsf1	100	88.730	Oryzias_latipes_hni
ENSFHEG00000016801	cpsf1	100	88.821	ENSORLG00015009979	cpsf1	100	88.798	Oryzias_latipes_hsok
ENSFHEG00000016801	cpsf1	100	88.103	ENSOMEG00000011849	cpsf1	100	88.179	Oryzias_melastigma
ENSFHEG00000016801	cpsf1	100	77.273	ENSOGAG00000000315	CPSF1	100	77.204	Otolemur_garnettii
ENSFHEG00000016801	cpsf1	100	76.860	ENSPPAG00000019280	CPSF1	100	76.997	Pan_paniscus
ENSFHEG00000016801	cpsf1	100	75.559	ENSPTRG00000051253	-	100	76.471	Pan_troglodytes
ENSFHEG00000016801	cpsf1	100	76.860	ENSPTRG00000049288	-	100	76.997	Pan_troglodytes
ENSFHEG00000016801	cpsf1	97	77.104	ENSPANG00000015005	CPSF1	99	77.247	Papio_anubis
ENSFHEG00000016801	cpsf1	100	84.091	ENSPKIG00000002582	cpsf1	100	84.159	Paramormyrops_kingsleyae
ENSFHEG00000016801	cpsf1	100	77.519	ENSPCIG00000009035	CPSF1	100	77.656	Phascolarctos_cinereus
ENSFHEG00000016801	cpsf1	100	92.230	ENSPFOG00000012870	cpsf1	100	92.297	Poecilia_formosa
ENSFHEG00000016801	cpsf1	100	91.762	ENSPREG00000016307	cpsf1	100	91.830	Poecilia_reticulata
ENSFHEG00000016801	cpsf1	100	69.855	ENSPPYG00000018973	CPSF1	100	69.649	Pongo_abelii
ENSFHEG00000016801	cpsf1	91	82.102	ENSPCAG00000011541	CPSF1	94	82.102	Procavia_capensis
ENSFHEG00000016801	cpsf1	100	73.862	ENSPCOG00000020001	CPSF1	100	75.463	Propithecus_coquereli
ENSFHEG00000016801	cpsf1	90	84.571	ENSPVAG00000006761	CPSF1	91	84.571	Pteropus_vampyrus
ENSFHEG00000016801	cpsf1	100	88.179	ENSPNYG00000004906	cpsf1	100	88.187	Pundamilia_nyererei
ENSFHEG00000016801	cpsf1	100	80.222	ENSPNAG00000024395	cpsf1	100	80.083	Pygocentrus_nattereri
ENSFHEG00000016801	cpsf1	100	77.019	ENSRNOG00000030705	Cpsf1	100	76.950	Rattus_norvegicus
ENSFHEG00000016801	cpsf1	100	76.653	ENSRBIG00000044907	CPSF1	99	78.571	Rhinopithecus_bieti
ENSFHEG00000016801	cpsf1	100	76.722	ENSRROG00000044861	CPSF1	99	78.571	Rhinopithecus_roxellana
ENSFHEG00000016801	cpsf1	97	77.461	ENSSBOG00000027177	CPSF1	99	77.389	Saimiri_boliviensis_boliviensis
ENSFHEG00000016801	cpsf1	100	77.450	ENSSHAG00000006500	CPSF1	100	77.587	Sarcophilus_harrisii
ENSFHEG00000016801	cpsf1	100	81.881	ENSSFOG00015004606	cpsf1	100	84.627	Scleropages_formosus
ENSFHEG00000016801	cpsf1	100	87.635	ENSSMAG00000020547	cpsf1	100	87.846	Scophthalmus_maximus
ENSFHEG00000016801	cpsf1	100	89.159	ENSSDUG00000001100	cpsf1	100	89.090	Seriola_dumerili
ENSFHEG00000016801	cpsf1	100	89.229	ENSSLDG00000003619	cpsf1	100	89.236	Seriola_lalandi_dorsalis
ENSFHEG00000016801	cpsf1	89	73.958	ENSSARG00000003643	CPSF1	92	73.878	Sorex_araneus
ENSFHEG00000016801	cpsf1	96	80.530	ENSSPUG00000014396	CPSF1	100	80.458	Sphenodon_punctatus
ENSFHEG00000016801	cpsf1	100	87.441	ENSSPAG00000005349	cpsf1	100	87.779	Stegastes_partitus
ENSFHEG00000016801	cpsf1	100	76.341	ENSSSCG00000005906	CPSF1	100	76.272	Sus_scrofa
ENSFHEG00000016801	cpsf1	96	85.385	ENSTRUG00000013134	cpsf1	99	85.315	Takifugu_rubripes
ENSFHEG00000016801	cpsf1	100	87.201	ENSTNIG00000014027	cpsf1	100	87.201	Tetraodon_nigroviridis
ENSFHEG00000016801	cpsf1	77	73.368	ENSTBEG00000001756	CPSF1	91	73.368	Tupaia_belangeri
ENSFHEG00000016801	cpsf1	89	81.771	ENSTTRG00000001937	CPSF1	89	81.597	Tursiops_truncatus
ENSFHEG00000016801	cpsf1	97	77.541	ENSUAMG00000006476	CPSF1	98	77.470	Ursus_americanus
ENSFHEG00000016801	cpsf1	100	92.659	ENSXCOG00000003608	cpsf1	100	92.867	Xiphophorus_couchianus
ENSFHEG00000016801	cpsf1	100	92.318	ENSXMAG00000005798	cpsf1	100	92.318	Xiphophorus_maculatus