EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000016833 (Gene tree)
Gene ID: 105930858
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 11026 bases
Position: chrKN811360.1:1959635-1970660
Accession: 105930858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031140	SAP	PF02037.27	4.1e-10	1	1
ENSFHEP00000031142	SAP	PF02037.27	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000033114	-	2095	-	ENSFHEP00000015224	572 (aa)	-	-
ENSFHET00000033116	-	3557	XM_021319830	ENSFHEP00000031142	610 (aa)	XP_021175505	UPI0006451FBB
ENSFHET00000023283	-	3150	XM_012869249	ENSFHEP00000031140	610 (aa)	XP_012724703	UPI0006451FBB

Gene Model

Click here to download ENSFHEG00000016833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000016833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000016833	xrcc6	99	57.026	ENSG00000196419	XRCC6	99	57.190	Homo_sapiens
ENSFHEG00000016833	xrcc6	99	86.700	ENSAPOG00000012704	xrcc6	100	86.700	Acanthochromis_polyacanthus
ENSFHEG00000016833	xrcc6	100	85.738	ENSACIG00000021277	xrcc6	100	85.738	Amphilophus_citrinellus
ENSFHEG00000016833	xrcc6	100	86.721	ENSAOCG00000021344	xrcc6	100	86.721	Amphiprion_ocellaris
ENSFHEG00000016833	xrcc6	100	86.885	ENSAPEG00000020712	xrcc6	100	86.885	Amphiprion_percula
ENSFHEG00000016833	xrcc6	100	85.410	ENSATEG00000007119	xrcc6	100	85.410	Anabas_testudineus
ENSFHEG00000016833	xrcc6	90	61.426	ENSAPLG00000004469	XRCC6	98	61.426	Anas_platyrhynchos
ENSFHEG00000016833	xrcc6	99	50.411	ENSANAG00000020017	-	99	50.411	Aotus_nancymaae
ENSFHEG00000016833	xrcc6	99	50.490	ENSANAG00000035230	-	99	50.490	Aotus_nancymaae
ENSFHEG00000016833	xrcc6	99	56.863	ENSANAG00000018684	XRCC6	98	58.059	Aotus_nancymaae
ENSFHEG00000016833	xrcc6	99	47.883	ENSANAG00000023445	-	97	51.584	Aotus_nancymaae
ENSFHEG00000016833	xrcc6	100	87.049	ENSACLG00000018608	xrcc6	100	87.049	Astatotilapia_calliptera
ENSFHEG00000016833	xrcc6	99	76.645	ENSAMXG00000007545	xrcc6	99	77.152	Astyanax_mexicanus
ENSFHEG00000016833	xrcc6	99	56.863	ENSCJAG00000045512	XRCC6	99	56.863	Callithrix_jacchus
ENSFHEG00000016833	xrcc6	99	56.699	ENSTSYG00000011348	XRCC6	99	56.699	Carlito_syrichta
ENSFHEG00000016833	xrcc6	99	47.619	ENSCCAG00000037663	-	97	47.619	Cebus_capucinus
ENSFHEG00000016833	xrcc6	99	54.085	ENSCCAG00000030041	-	95	53.595	Cebus_capucinus
ENSFHEG00000016833	xrcc6	93	54.762	ENSCCAG00000030468	-	99	54.762	Cebus_capucinus
ENSFHEG00000016833	xrcc6	99	45.305	ENSCCAG00000035711	-	99	45.799	Cebus_capucinus
ENSFHEG00000016833	xrcc6	99	57.190	ENSCATG00000042366	XRCC6	99	57.353	Cercocebus_atys
ENSFHEG00000016833	xrcc6	99	57.119	ENSCLAG00000016669	XRCC6	99	57.119	Chinchilla_lanigera
ENSFHEG00000016833	xrcc6	99	57.190	ENSCSAG00000005784	XRCC6	99	57.353	Chlorocebus_sabaeus
ENSFHEG00000016833	xrcc6	99	59.934	ENSCPBG00000020535	XRCC6	99	59.934	Chrysemys_picta_bellii
ENSFHEG00000016833	xrcc6	99	34.154	ENSCING00000000633	-	95	34.655	Ciona_intestinalis
ENSFHEG00000016833	xrcc6	99	57.190	ENSCANG00000031032	XRCC6	99	57.353	Colobus_angolensis_palliatus
ENSFHEG00000016833	xrcc6	99	52.883	ENSCGRG00001019029	Xrcc6	99	52.883	Cricetulus_griseus_chok1gshd
ENSFHEG00000016833	xrcc6	99	57.496	ENSCGRG00000001528	Xrcc6	99	57.496	Cricetulus_griseus_crigri
ENSFHEG00000016833	xrcc6	100	79.508	ENSCSEG00000020434	xrcc6	100	79.508	Cynoglossus_semilaevis
ENSFHEG00000016833	xrcc6	100	89.672	ENSCVAG00000002189	xrcc6	100	89.672	Cyprinodon_variegatus
ENSFHEG00000016833	xrcc6	99	75.041	ENSDARG00000071551	xrcc6	99	75.698	Danio_rerio
ENSFHEG00000016833	xrcc6	78	53.528	ENSETEG00000015333	-	77	53.528	Echinops_telfairi
ENSFHEG00000016833	xrcc6	99	55.974	ENSEASG00005001514	XRCC6	99	56.792	Equus_asinus_asinus
ENSFHEG00000016833	xrcc6	99	56.137	ENSECAG00000017563	XRCC6	99	56.460	Equus_caballus
ENSFHEG00000016833	xrcc6	100	73.607	ENSELUG00000020301	xrcc6	100	73.607	Esox_lucius
ENSFHEG00000016833	xrcc6	99	58.891	ENSFALG00000011908	XRCC6	96	59.217	Ficedula_albicollis
ENSFHEG00000016833	xrcc6	99	67.264	ENSGMOG00000013524	xrcc6	100	67.264	Gadus_morhua
ENSFHEG00000016833	xrcc6	99	59.609	ENSGALG00000011932	XRCC6	99	59.772	Gallus_gallus
ENSFHEG00000016833	xrcc6	100	89.672	ENSGAFG00000008130	xrcc6	100	89.672	Gambusia_affinis
ENSFHEG00000016833	xrcc6	99	82.085	ENSGACG00000004868	xrcc6	99	82.085	Gasterosteus_aculeatus
ENSFHEG00000016833	xrcc6	99	59.770	ENSGAGG00000017518	XRCC6	99	59.770	Gopherus_agassizii
ENSFHEG00000016833	xrcc6	99	57.026	ENSGGOG00000015885	XRCC6	99	57.190	Gorilla_gorilla
ENSFHEG00000016833	xrcc6	93	87.102	ENSHBUG00000023281	xrcc6	100	87.102	Haplochromis_burtoni
ENSFHEG00000016833	xrcc6	99	56.066	ENSHGLG00000018078	XRCC6	99	55.738	Heterocephalus_glaber_female
ENSFHEG00000016833	xrcc6	99	56.066	ENSHGLG00100011264	XRCC6	99	55.738	Heterocephalus_glaber_male
ENSFHEG00000016833	xrcc6	100	78.852	ENSHCOG00000009821	xrcc6	100	78.852	Hippocampus_comes
ENSFHEG00000016833	xrcc6	99	75.658	ENSIPUG00000000767	xrcc6	99	75.000	Ictalurus_punctatus
ENSFHEG00000016833	xrcc6	99	56.792	ENSSTOG00000009490	XRCC6	99	56.792	Ictidomys_tridecemlineatus
ENSFHEG00000016833	xrcc6	99	52.961	ENSJJAG00000017136	Xrcc6	99	53.707	Jaculus_jaculus
ENSFHEG00000016833	xrcc6	99	89.163	ENSKMAG00000002141	xrcc6	99	89.163	Kryptolebias_marmoratus
ENSFHEG00000016833	xrcc6	99	85.362	ENSLBEG00000002691	xrcc6	99	85.362	Labrus_bergylta
ENSFHEG00000016833	xrcc6	87	65.347	ENSLOCG00000011533	xrcc6	99	65.347	Lepisosteus_oculatus
ENSFHEG00000016833	xrcc6	99	57.190	ENSMFAG00000003352	XRCC6	99	57.353	Macaca_fascicularis
ENSFHEG00000016833	xrcc6	99	57.190	ENSMMUG00000001856	XRCC6	99	57.353	Macaca_mulatta
ENSFHEG00000016833	xrcc6	99	57.190	ENSMNEG00000035076	XRCC6	99	57.353	Macaca_nemestrina
ENSFHEG00000016833	xrcc6	99	57.190	ENSMLEG00000019869	XRCC6	99	57.353	Mandrillus_leucophaeus
ENSFHEG00000016833	xrcc6	96	83.816	ENSMAMG00000003405	xrcc6	97	83.816	Mastacembelus_armatus
ENSFHEG00000016833	xrcc6	100	84.288	ENSMAMG00000003368	xrcc6	100	84.288	Mastacembelus_armatus
ENSFHEG00000016833	xrcc6	100	86.885	ENSMZEG00005028080	xrcc6	100	86.885	Maylandia_zebra
ENSFHEG00000016833	xrcc6	99	59.675	ENSMGAG00000012146	XRCC6	99	59.283	Meleagris_gallopavo
ENSFHEG00000016833	xrcc6	99	57.661	ENSMAUG00000017340	Xrcc6	99	57.661	Mesocricetus_auratus
ENSFHEG00000016833	xrcc6	99	56.837	ENSMOCG00000015717	Xrcc6	99	57.002	Microtus_ochrogaster
ENSFHEG00000016833	xrcc6	100	82.787	ENSMMOG00000003536	xrcc6	99	82.787	Mola_mola
ENSFHEG00000016833	xrcc6	100	85.410	ENSMALG00000013912	xrcc6	95	85.410	Monopterus_albus
ENSFHEG00000016833	xrcc6	99	54.290	MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.290	Mus_caroli
ENSFHEG00000016833	xrcc6	99	58.251	ENSMUSG00000022471	Xrcc6	99	58.251	Mus_musculus
ENSFHEG00000016833	xrcc6	99	58.416	MGP_PahariEiJ_G0020069	Xrcc6	99	58.416	Mus_pahari
ENSFHEG00000016833	xrcc6	95	58.966	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.966	Mus_spretus
ENSFHEG00000016833	xrcc6	99	57.496	ENSNGAG00000013750	Xrcc6	99	57.496	Nannospalax_galili
ENSFHEG00000016833	xrcc6	100	87.049	ENSNBRG00000004125	xrcc6	100	87.049	Neolamprologus_brichardi
ENSFHEG00000016833	xrcc6	95	58.003	ENSOPRG00000002386	XRCC6	99	58.003	Ochotona_princeps
ENSFHEG00000016833	xrcc6	99	56.628	ENSODEG00000015847	XRCC6	99	56.628	Octodon_degus
ENSFHEG00000016833	xrcc6	100	86.393	ENSONIG00000019715	xrcc6	100	86.393	Oreochromis_niloticus
ENSFHEG00000016833	xrcc6	68	59.080	ENSOANG00000011328	XRCC6	99	59.080	Ornithorhynchus_anatinus
ENSFHEG00000016833	xrcc6	99	56.743	ENSOCUG00000006948	XRCC6	99	57.237	Oryctolagus_cuniculus
ENSFHEG00000016833	xrcc6	100	84.779	ENSORLG00020007820	xrcc6	100	84.779	Oryzias_latipes_hni
ENSFHEG00000016833	xrcc6	100	84.288	ENSORLG00015006406	xrcc6	100	84.288	Oryzias_latipes_hsok
ENSFHEG00000016833	xrcc6	100	84.779	ENSOMEG00000008998	xrcc6	100	84.779	Oryzias_melastigma
ENSFHEG00000016833	xrcc6	99	56.628	ENSOGAG00000008821	XRCC6	99	56.792	Otolemur_garnettii
ENSFHEG00000016833	xrcc6	92	56.604	ENSPPAG00000037167	XRCC6	99	56.604	Pan_paniscus
ENSFHEG00000016833	xrcc6	99	57.026	ENSPTRG00000022548	XRCC6	99	57.949	Pan_troglodytes
ENSFHEG00000016833	xrcc6	99	57.026	ENSPTRG00000045824	XRCC6	99	57.949	Pan_troglodytes
ENSFHEG00000016833	xrcc6	99	57.026	ENSPANG00000001252	XRCC6	99	60.345	Papio_anubis
ENSFHEG00000016833	xrcc6	99	72.020	ENSPKIG00000003974	xrcc6	99	72.020	Paramormyrops_kingsleyae
ENSFHEG00000016833	xrcc6	99	79.900	ENSPMGG00000014220	xrcc6	100	79.900	Periophthalmus_magnuspinnatus
ENSFHEG00000016833	xrcc6	99	56.837	ENSPEMG00000023446	Xrcc6	99	56.837	Peromyscus_maniculatus_bairdii
ENSFHEG00000016833	xrcc6	99	58.265	ENSPCIG00000026409	XRCC6	99	58.265	Phascolarctos_cinereus
ENSFHEG00000016833	xrcc6	100	92.295	ENSPFOG00000017173	xrcc6	100	92.295	Poecilia_formosa
ENSFHEG00000016833	xrcc6	100	91.967	ENSPLAG00000000562	xrcc6	100	91.967	Poecilia_latipinna
ENSFHEG00000016833	xrcc6	100	92.131	ENSPMEG00000018478	xrcc6	100	92.131	Poecilia_mexicana
ENSFHEG00000016833	xrcc6	100	91.176	ENSPREG00000020957	xrcc6	93	91.176	Poecilia_reticulata
ENSFHEG00000016833	xrcc6	99	50.817	ENSPPYG00000011876	XRCC6	99	50.980	Pongo_abelii
ENSFHEG00000016833	xrcc6	99	57.049	ENSPVAG00000001168	XRCC6	99	57.237	Pteropus_vampyrus
ENSFHEG00000016833	xrcc6	100	86.721	ENSPNYG00000003815	xrcc6	100	82.527	Pundamilia_nyererei
ENSFHEG00000016833	xrcc6	99	57.377	ENSRNOG00000006392	Xrcc6	99	57.541	Rattus_norvegicus
ENSFHEG00000016833	xrcc6	99	52.941	ENSRBIG00000039794	XRCC6	99	53.846	Rhinopithecus_bieti
ENSFHEG00000016833	xrcc6	99	57.190	ENSRROG00000030297	XRCC6	99	57.353	Rhinopithecus_roxellana
ENSFHEG00000016833	xrcc6	67	51.843	ENSSBOG00000024724	-	99	51.843	Saimiri_boliviensis_boliviensis
ENSFHEG00000016833	xrcc6	99	57.680	ENSSHAG00000010790	XRCC6	99	57.680	Sarcophilus_harrisii
ENSFHEG00000016833	xrcc6	99	74.671	ENSSFOG00015014409	xrcc6	99	74.671	Scleropages_formosus
ENSFHEG00000016833	xrcc6	100	86.230	ENSSMAG00000006496	xrcc6	100	86.230	Scophthalmus_maximus
ENSFHEG00000016833	xrcc6	100	86.721	ENSSDUG00000007542	xrcc6	100	86.721	Seriola_dumerili
ENSFHEG00000016833	xrcc6	100	86.230	ENSSLDG00000009974	xrcc6	100	86.230	Seriola_lalandi_dorsalis
ENSFHEG00000016833	xrcc6	99	58.660	ENSSPUG00000012086	XRCC6	99	58.824	Sphenodon_punctatus
ENSFHEG00000016833	xrcc6	100	86.393	ENSSPAG00000015199	xrcc6	100	86.393	Stegastes_partitus
ENSFHEG00000016833	xrcc6	96	60.410	ENSTGUG00000009852	-	95	60.410	Taeniopygia_guttata
ENSFHEG00000016833	xrcc6	99	79.310	ENSTRUG00000017070	xrcc6	99	79.310	Takifugu_rubripes
ENSFHEG00000016833	xrcc6	96	78.511	ENSTNIG00000012947	xrcc6	99	78.511	Tetraodon_nigroviridis
ENSFHEG00000016833	xrcc6	96	53.425	ENSTBEG00000011736	XRCC6	99	53.425	Tupaia_belangeri
ENSFHEG00000016833	xrcc6	99	46.972	ENSTTRG00000006749	XRCC6	99	47.791	Tursiops_truncatus
ENSFHEG00000016833	xrcc6	100	91.639	ENSXMAG00000009691	xrcc6	100	91.639	Xiphophorus_maculatus