EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000017264 (Gene tree)
Gene ID: 105929758
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 12318 bases
Position: chrKN811341.1:123565-135882
Accession: 105929758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031366	zf-C2H2	PF00096.26	4.8e-18	1	2
ENSFHEP00000031366	zf-C2H2	PF00096.26	4.8e-18	2	2
ENSFHEP00000015606	zf-C2H2	PF00096.26	7.3e-18	1	2
ENSFHEP00000015606	zf-C2H2	PF00096.26	7.3e-18	2	2
ENSFHEP00000031380	zf-C2H2	PF00096.26	7.3e-18	1	2
ENSFHEP00000031380	zf-C2H2	PF00096.26	7.3e-18	2	2
ENSFHEP00000031366	zf-met	PF12874.7	8.8e-11	1	2
ENSFHEP00000031366	zf-met	PF12874.7	8.8e-11	2	2
ENSFHEP00000015606	zf-met	PF12874.7	1.3e-10	1	2
ENSFHEP00000015606	zf-met	PF12874.7	1.3e-10	2	2
ENSFHEP00000031380	zf-met	PF12874.7	1.3e-10	1	2
ENSFHEP00000031380	zf-met	PF12874.7	1.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000033268	-	3396	-	ENSFHEP00000031366	1131 (aa)	-	-
ENSFHET00000023769	-	5354	XM_012867657	ENSFHEP00000015606	1207 (aa)	XP_012723111	UPI000644910F
ENSFHET00000023751	-	5166	XM_021319057	ENSFHEP00000031380	1207 (aa)	XP_021174732	UPI000644910F

Gene Model

Click here to download ENSFHEG00000017264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017264's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000017264	si:ch211-212k18.5	55	45.573	ENSFHEG00000017550	sall2	59	44.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017264	si:ch211-212k18.5	99	75.183	ENSAPOG00000013387	si:ch211-212k18.5	99	75.915	Acanthochromis_polyacanthus
ENSFHEG00000017264	si:ch211-212k18.5	92	43.430	ENSAPOG00000015347	sall2	64	43.402	Acanthochromis_polyacanthus
ENSFHEG00000017264	si:ch211-212k18.5	80	80.742	ENSACIG00000019922	si:ch211-212k18.5	99	81.546	Amphilophus_citrinellus
ENSFHEG00000017264	si:ch211-212k18.5	99	73.474	ENSAOCG00000010737	si:ch211-212k18.5	99	73.800	Amphiprion_ocellaris
ENSFHEG00000017264	si:ch211-212k18.5	77	54.386	ENSAOCG00000016559	sall2	54	46.461	Amphiprion_ocellaris
ENSFHEG00000017264	si:ch211-212k18.5	54	46.931	ENSAPEG00000020215	sall2	84	46.341	Amphiprion_percula
ENSFHEG00000017264	si:ch211-212k18.5	99	73.718	ENSAPEG00000006751	si:ch211-212k18.5	99	74.044	Amphiprion_percula
ENSFHEG00000017264	si:ch211-212k18.5	77	80.765	ENSATEG00000001254	si:ch211-212k18.5	99	81.112	Anabas_testudineus
ENSFHEG00000017264	si:ch211-212k18.5	99	72.765	ENSACLG00000009709	si:ch211-212k18.5	99	72.386	Astatotilapia_calliptera
ENSFHEG00000017264	si:ch211-212k18.5	63	70.588	ENSACLG00000019867	sall2	71	44.125	Astatotilapia_calliptera
ENSFHEG00000017264	si:ch211-212k18.5	99	56.533	ENSAMXG00000010979	si:ch211-212k18.5	99	56.371	Astyanax_mexicanus
ENSFHEG00000017264	si:ch211-212k18.5	69	48.006	ENSAMXG00000020956	sall2	61	60.000	Astyanax_mexicanus
ENSFHEG00000017264	si:ch211-212k18.5	68	67.647	ENSCSEG00000021148	sall2	53	43.325	Cynoglossus_semilaevis
ENSFHEG00000017264	si:ch211-212k18.5	100	67.423	ENSCSEG00000004426	si:ch211-212k18.5	100	67.666	Cynoglossus_semilaevis
ENSFHEG00000017264	si:ch211-212k18.5	58	65.789	ENSCVAG00000006032	sall2	62	75.862	Cyprinodon_variegatus
ENSFHEG00000017264	si:ch211-212k18.5	100	87.273	ENSCVAG00000007475	si:ch211-212k18.5	100	87.273	Cyprinodon_variegatus
ENSFHEG00000017264	si:ch211-212k18.5	63	50.000	ENSDARG00000075116	sall2	66	53.061	Danio_rerio
ENSFHEG00000017264	si:ch211-212k18.5	98	54.962	ENSDARG00000103316	si:ch211-212k18.5	99	53.905	Danio_rerio
ENSFHEG00000017264	si:ch211-212k18.5	83	47.492	ENSELUG00000004389	sall2	96	41.486	Esox_lucius
ENSFHEG00000017264	si:ch211-212k18.5	98	56.373	ENSELUG00000024534	si:ch211-212k18.5	97	57.658	Esox_lucius
ENSFHEG00000017264	si:ch211-212k18.5	99	86.600	ENSGAFG00000003746	si:ch211-212k18.5	99	85.856	Gambusia_affinis
ENSFHEG00000017264	si:ch211-212k18.5	58	67.647	ENSGAFG00000015194	sall2	64	48.438	Gambusia_affinis
ENSFHEG00000017264	si:ch211-212k18.5	99	72.765	ENSHBUG00000019672	si:ch211-212k18.5	99	73.328	Haplochromis_burtoni
ENSFHEG00000017264	si:ch211-212k18.5	80	70.588	ENSHBUG00000002882	sall2	64	44.245	Haplochromis_burtoni
ENSFHEG00000017264	si:ch211-212k18.5	98	59.600	ENSHCOG00000002842	si:ch211-212k18.5	99	58.793	Hippocampus_comes
ENSFHEG00000017264	si:ch211-212k18.5	96	55.035	ENSIPUG00000002559	sall2	96	55.074	Ictalurus_punctatus
ENSFHEG00000017264	si:ch211-212k18.5	99	74.101	ENSKMAG00000019657	si:ch211-212k18.5	99	74.755	Kryptolebias_marmoratus
ENSFHEG00000017264	si:ch211-212k18.5	99	69.821	ENSLBEG00000020887	si:ch211-212k18.5	99	69.413	Labrus_bergylta
ENSFHEG00000017264	si:ch211-212k18.5	70	84.579	ENSMAMG00000015887	si:ch211-212k18.5	99	83.995	Mastacembelus_armatus
ENSFHEG00000017264	si:ch211-212k18.5	80	70.588	ENSMZEG00005012103	sall2	64	44.245	Maylandia_zebra
ENSFHEG00000017264	si:ch211-212k18.5	99	72.847	ENSMZEG00005021214	si:ch211-212k18.5	99	72.467	Maylandia_zebra
ENSFHEG00000017264	si:ch211-212k18.5	91	80.160	ENSMMOG00000012726	si:ch211-212k18.5	98	80.337	Mola_mola
ENSFHEG00000017264	si:ch211-212k18.5	91	77.511	ENSMALG00000000979	si:ch211-212k18.5	97	73.345	Monopterus_albus
ENSFHEG00000017264	si:ch211-212k18.5	94	70.551	ENSNBRG00000023948	si:ch211-212k18.5	96	70.732	Neolamprologus_brichardi
ENSFHEG00000017264	si:ch211-212k18.5	73	46.034	ENSNBRG00000017645	sall2	78	45.383	Neolamprologus_brichardi
ENSFHEG00000017264	si:ch211-212k18.5	99	69.779	ENSORLG00000030429	si:ch211-212k18.5	99	69.092	Oryzias_latipes
ENSFHEG00000017264	si:ch211-212k18.5	60	48.387	ENSORLG00000026871	sall2	59	46.021	Oryzias_latipes
ENSFHEG00000017264	si:ch211-212k18.5	99	69.615	ENSORLG00020008145	si:ch211-212k18.5	99	69.011	Oryzias_latipes_hni
ENSFHEG00000017264	si:ch211-212k18.5	60	48.387	ENSORLG00020007873	sall2	55	47.595	Oryzias_latipes_hni
ENSFHEG00000017264	si:ch211-212k18.5	99	68.878	ENSORLG00015004982	si:ch211-212k18.5	99	69.256	Oryzias_latipes_hsok
ENSFHEG00000017264	si:ch211-212k18.5	60	56.604	ENSOMEG00000012904	sall2	59	46.377	Oryzias_melastigma
ENSFHEG00000017264	si:ch211-212k18.5	98	69.769	ENSOMEG00000013949	si:ch211-212k18.5	99	70.331	Oryzias_melastigma
ENSFHEG00000017264	si:ch211-212k18.5	77	65.789	ENSPKIG00000009207	sall2	67	50.807	Paramormyrops_kingsleyae
ENSFHEG00000017264	si:ch211-212k18.5	94	65.240	ENSPMGG00000018714	si:ch211-212k18.5	99	64.105	Periophthalmus_magnuspinnatus
ENSFHEG00000017264	si:ch211-212k18.5	58	67.647	ENSPFOG00000016504	sall2	64	50.000	Poecilia_formosa
ENSFHEG00000017264	si:ch211-212k18.5	99	87.760	ENSPFOG00000023705	si:ch211-212k18.5	99	87.786	Poecilia_formosa
ENSFHEG00000017264	si:ch211-212k18.5	57	67.647	ENSPLAG00000018320	sall2	64	50.000	Poecilia_latipinna
ENSFHEG00000017264	si:ch211-212k18.5	99	87.677	ENSPLAG00000002577	si:ch211-212k18.5	99	87.593	Poecilia_latipinna
ENSFHEG00000017264	si:ch211-212k18.5	58	67.647	ENSPMEG00000006335	sall2	59	44.914	Poecilia_mexicana
ENSFHEG00000017264	si:ch211-212k18.5	99	87.760	ENSPMEG00000016395	si:ch211-212k18.5	99	87.786	Poecilia_mexicana
ENSFHEG00000017264	si:ch211-212k18.5	67	63.158	ENSPREG00000021908	sall2	67	50.000	Poecilia_reticulata
ENSFHEG00000017264	si:ch211-212k18.5	99	88.089	ENSPREG00000005292	si:ch211-212k18.5	99	88.089	Poecilia_reticulata
ENSFHEG00000017264	si:ch211-212k18.5	99	70.798	ENSPNYG00000021576	si:ch211-212k18.5	99	70.414	Pundamilia_nyererei
ENSFHEG00000017264	si:ch211-212k18.5	93	67.328	ENSPNAG00000006123	si:ch211-212k18.5	99	55.860	Pygocentrus_nattereri
ENSFHEG00000017264	si:ch211-212k18.5	65	47.887	ENSPNAG00000021463	sall2	61	60.000	Pygocentrus_nattereri
ENSFHEG00000017264	si:ch211-212k18.5	99	71.254	ENSSMAG00000006241	si:ch211-212k18.5	99	71.417	Scophthalmus_maximus
ENSFHEG00000017264	si:ch211-212k18.5	85	44.330	ENSSMAG00000014157	sall2	81	43.935	Scophthalmus_maximus
ENSFHEG00000017264	si:ch211-212k18.5	77	54.386	ENSSDUG00000012274	sall2	54	46.253	Seriola_dumerili
ENSFHEG00000017264	si:ch211-212k18.5	99	75.325	ENSSDUG00000006164	si:ch211-212k18.5	99	74.838	Seriola_dumerili
ENSFHEG00000017264	si:ch211-212k18.5	99	77.310	ENSSLDG00000003393	si:ch211-212k18.5	99	76.823	Seriola_lalandi_dorsalis
ENSFHEG00000017264	si:ch211-212k18.5	77	54.386	ENSSLDG00000001653	sall2	54	45.925	Seriola_lalandi_dorsalis
ENSFHEG00000017264	si:ch211-212k18.5	97	73.154	ENSSPAG00000013435	si:ch211-212k18.5	97	75.087	Stegastes_partitus
ENSFHEG00000017264	si:ch211-212k18.5	74	43.834	ENSSPAG00000023009	sall2	61	43.673	Stegastes_partitus
ENSFHEG00000017264	si:ch211-212k18.5	86	75.576	ENSTRUG00000025082	si:ch211-212k18.5	98	75.376	Takifugu_rubripes
ENSFHEG00000017264	si:ch211-212k18.5	99	84.641	ENSXCOG00000000762	si:ch211-212k18.5	99	85.099	Xiphophorus_couchianus
ENSFHEG00000017264	si:ch211-212k18.5	67	63.158	ENSXMAG00000000902	sall2	64	48.438	Xiphophorus_maculatus
ENSFHEG00000017264	si:ch211-212k18.5	99	86.583	ENSXMAG00000001461	si:ch211-212k18.5	99	86.529	Xiphophorus_maculatus