EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000017265 (Gene tree)
Gene ID: 105925239
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 12280 bases
Position: chrKN811283.1:360076-372355
Accession: 105925239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031427	RRM_1	PF00076.22	7.9e-41	1	4
ENSFHEP00000031427	RRM_1	PF00076.22	7.9e-41	2	4
ENSFHEP00000031427	RRM_1	PF00076.22	7.9e-41	3	4
ENSFHEP00000031427	RRM_1	PF00076.22	7.9e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000023795	-	2559	XM_012860973	ENSFHEP00000031427	463 (aa)	XP_012716427	UPI000644F268

Gene Model

Click here to download ENSFHEG00000017265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000017265	-	82	41.470	ENSFHEG00000018000	ncl	70	40.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017265	-	85	48.475	ENSACIG00000021941	-	95	48.639	Amphilophus_citrinellus
ENSFHEG00000017265	-	88	47.317	ENSACLG00000009613	-	97	47.317	Astatotilapia_calliptera
ENSFHEG00000017265	-	92	47.717	ENSCSEG00000017388	-	83	47.392	Cynoglossus_semilaevis
ENSFHEG00000017265	-	81	41.316	ENSGMOG00000017831	-	96	41.885	Gadus_morhua
ENSFHEG00000017265	-	96	64.549	ENSGAFG00000018408	-	100	64.549	Gambusia_affinis
ENSFHEG00000017265	-	88	47.073	ENSHBUG00000006683	-	97	47.073	Haplochromis_burtoni
ENSFHEG00000017265	-	91	48.712	ENSHCOG00000020361	-	96	48.712	Hippocampus_comes
ENSFHEG00000017265	-	84	64.987	ENSKMAG00000003154	-	86	64.987	Kryptolebias_marmoratus
ENSFHEG00000017265	-	88	46.829	ENSMZEG00005005300	-	97	46.829	Maylandia_zebra
ENSFHEG00000017265	-	84	51.680	ENSMMOG00000018095	-	89	51.680	Mola_mola
ENSFHEG00000017265	-	88	50.167	ENSMALG00000006207	-	82	50.167	Monopterus_albus
ENSFHEG00000017265	-	81	46.543	ENSPMGG00000013705	-	89	48.138	Periophthalmus_magnuspinnatus
ENSFHEG00000017265	-	91	63.347	ENSPFOG00000016767	-	100	62.424	Poecilia_formosa
ENSFHEG00000017265	-	96	62.828	ENSPLAG00000000597	-	100	62.828	Poecilia_latipinna
ENSFHEG00000017265	-	96	63.265	ENSPMEG00000004046	-	100	63.265	Poecilia_mexicana
ENSFHEG00000017265	-	85	69.077	ENSPREG00000007170	-	94	63.103	Poecilia_reticulata
ENSFHEG00000017265	-	88	48.537	ENSPNYG00000000391	-	97	48.537	Pundamilia_nyererei
ENSFHEG00000017265	-	88	49.272	ENSTRUG00000023880	-	82	49.272	Takifugu_rubripes
ENSFHEG00000017265	-	96	64.959	ENSXMAG00000004403	-	100	64.959	Xiphophorus_maculatus