EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000017452 (Gene tree)
Gene ID: 105915819
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 3258 bases
Position: chrKN805670.1:150909-154166
Accession: 105915819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000015793	GTP_EFTU	PF00009.27	1.3e-53	1	1
ENSFHEP00000015793	MMR_HSR1	PF01926.23	2.2e-07	1	1
ENSFHEP00000015793	GTP_EFTU_D2	PF03144.25	3.9e-12	1	1
ENSFHEP00000015793	GTP_EFTU_D3	PF03143.17	2.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024006	-	2783	XM_012850046	ENSFHEP00000015793	457 (aa)	XP_012705500	A0A147B0H9

Gene Model

Click here to download ENSFHEG00000017452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000017452	si:dkey-37o8.1	100	69.048	ENSFHEG00000011259	eef1a1b	100	69.048
ENSFHEG00000017452	si:dkey-37o8.1	96	30.112	ENSFHEG00000020646	tufm	85	30.112
ENSFHEG00000017452	si:dkey-37o8.1	96	37.923	ENSFHEG00000009090	gspt1l	76	37.923
ENSFHEG00000017452	si:dkey-37o8.1	99	69.956	ENSFHEG00000015054	-	99	69.956
ENSFHEG00000017452	si:dkey-37o8.1	96	38.636	ENSFHEG00000006942	hbs1l	66	38.636
ENSFHEG00000017452	si:dkey-37o8.1	100	68.831	ENSFHEG00000005331	EEF1A1	100	68.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017452	si:dkey-37o8.1	98	90.625	ENSAPOG00000016459	si:dkey-37o8.1	98	90.625	Acanthochromis_polyacanthus
ENSFHEG00000017452	si:dkey-37o8.1	96	87.643	ENSACIG00000020985	si:dkey-37o8.1	82	87.643	Amphilophus_citrinellus
ENSFHEG00000017452	si:dkey-37o8.1	100	89.716	ENSAOCG00000002663	si:dkey-37o8.1	100	89.716	Amphiprion_ocellaris
ENSFHEG00000017452	si:dkey-37o8.1	100	89.716	ENSAPEG00000012670	si:dkey-37o8.1	100	89.716	Amphiprion_percula
ENSFHEG00000017452	si:dkey-37o8.1	92	90.047	ENSATEG00000002217	si:dkey-37o8.1	99	90.047	Anabas_testudineus
ENSFHEG00000017452	si:dkey-37o8.1	98	89.509	ENSACLG00000003519	si:dkey-37o8.1	98	89.509	Astatotilapia_calliptera
ENSFHEG00000017452	si:dkey-37o8.1	100	84.279	ENSAMXG00000002728	si:dkey-37o8.1	100	84.279	Astyanax_mexicanus
ENSFHEG00000017452	si:dkey-37o8.1	98	72.444	ENSCPBG00000020570	-	89	72.444	Chrysemys_picta_bellii
ENSFHEG00000017452	si:dkey-37o8.1	98	84.071	ENSCSEG00000019807	si:dkey-37o8.1	98	83.370	Cynoglossus_semilaevis
ENSFHEG00000017452	si:dkey-37o8.1	99	92.967	ENSCVAG00000009828	si:dkey-37o8.1	99	92.967	Cyprinodon_variegatus
ENSFHEG00000017452	si:dkey-37o8.1	100	79.913	ENSDARG00000071727	si:dkey-37o8.1	95	79.913	Danio_rerio
ENSFHEG00000017452	si:dkey-37o8.1	100	83.624	ENSELUG00000007495	si:dkey-37o8.1	100	83.624	Esox_lucius
ENSFHEG00000017452	si:dkey-37o8.1	99	77.974	ENSGMOG00000006122	si:dkey-37o8.1	100	77.974	Gadus_morhua
ENSFHEG00000017452	si:dkey-37o8.1	98	87.500	ENSGAFG00000000367	si:dkey-37o8.1	99	87.500	Gambusia_affinis
ENSFHEG00000017452	si:dkey-37o8.1	100	86.652	ENSGACG00000004505	si:dkey-37o8.1	100	86.652	Gasterosteus_aculeatus
ENSFHEG00000017452	si:dkey-37o8.1	96	74.715	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSFHEG00000017452	si:dkey-37o8.1	98	89.286	ENSHBUG00000015515	si:dkey-37o8.1	98	89.286	Haplochromis_burtoni
ENSFHEG00000017452	si:dkey-37o8.1	99	80.710	ENSHCOG00000001215	si:dkey-37o8.1	100	80.710	Hippocampus_comes
ENSFHEG00000017452	si:dkey-37o8.1	100	83.188	ENSIPUG00000004067	si:dkey-37o8.1	100	83.188	Ictalurus_punctatus
ENSFHEG00000017452	si:dkey-37o8.1	100	91.904	ENSKMAG00000015910	si:dkey-37o8.1	100	91.904	Kryptolebias_marmoratus
ENSFHEG00000017452	si:dkey-37o8.1	99	88.987	ENSLBEG00000021334	si:dkey-37o8.1	90	88.987	Labrus_bergylta
ENSFHEG00000017452	si:dkey-37o8.1	99	75.991	ENSLACG00000003948	si:dkey-37o8.1	99	75.991	Latimeria_chalumnae
ENSFHEG00000017452	si:dkey-37o8.1	100	80.392	ENSLOCG00000011245	si:dkey-37o8.1	100	80.392	Lepisosteus_oculatus
ENSFHEG00000017452	si:dkey-37o8.1	99	75.330	ENSMAMG00000009907	si:dkey-37o8.1	95	75.330	Mastacembelus_armatus
ENSFHEG00000017452	si:dkey-37o8.1	98	89.509	ENSMZEG00005018358	si:dkey-37o8.1	98	89.509	Maylandia_zebra
ENSFHEG00000017452	si:dkey-37o8.1	99	87.445	ENSMMOG00000004111	si:dkey-37o8.1	99	87.445	Mola_mola
ENSFHEG00000017452	si:dkey-37o8.1	96	81.050	ENSMALG00000017152	si:dkey-37o8.1	99	81.050	Monopterus_albus
ENSFHEG00000017452	si:dkey-37o8.1	98	89.286	ENSNBRG00000013552	si:dkey-37o8.1	98	89.286	Neolamprologus_brichardi
ENSFHEG00000017452	si:dkey-37o8.1	98	89.509	ENSONIG00000006165	si:dkey-37o8.1	98	89.509	Oreochromis_niloticus
ENSFHEG00000017452	si:dkey-37o8.1	99	89.579	ENSORLG00000019066	si:dkey-37o8.1	99	89.579	Oryzias_latipes
ENSFHEG00000017452	si:dkey-37o8.1	99	89.579	ENSORLG00020008094	si:dkey-37o8.1	99	89.579	Oryzias_latipes_hni
ENSFHEG00000017452	si:dkey-37o8.1	99	89.579	ENSORLG00015008410	si:dkey-37o8.1	99	89.579	Oryzias_latipes_hsok
ENSFHEG00000017452	si:dkey-37o8.1	100	89.278	ENSOMEG00000001868	si:dkey-37o8.1	100	89.278	Oryzias_melastigma
ENSFHEG00000017452	si:dkey-37o8.1	100	81.917	ENSPKIG00000017246	si:dkey-37o8.1	100	81.917	Paramormyrops_kingsleyae
ENSFHEG00000017452	si:dkey-37o8.1	59	67.883	ENSPSIG00000008080	-	96	67.883	Pelodiscus_sinensis
ENSFHEG00000017452	si:dkey-37o8.1	100	93.435	ENSPFOG00000013173	si:dkey-37o8.1	100	93.435	Poecilia_formosa
ENSFHEG00000017452	si:dkey-37o8.1	100	91.904	ENSPLAG00000010405	si:dkey-37o8.1	100	91.904	Poecilia_latipinna
ENSFHEG00000017452	si:dkey-37o8.1	100	93.873	ENSPMEG00000015233	si:dkey-37o8.1	100	93.873	Poecilia_mexicana
ENSFHEG00000017452	si:dkey-37o8.1	99	93.172	ENSPREG00000006280	si:dkey-37o8.1	100	93.172	Poecilia_reticulata
ENSFHEG00000017452	si:dkey-37o8.1	98	89.062	ENSPNYG00000002059	si:dkey-37o8.1	98	89.062	Pundamilia_nyererei
ENSFHEG00000017452	si:dkey-37o8.1	100	83.188	ENSPNAG00000009990	si:dkey-37o8.1	100	83.188	Pygocentrus_nattereri
ENSFHEG00000017452	si:dkey-37o8.1	99	81.898	ENSSFOG00015019070	si:dkey-37o8.1	99	81.898	Scleropages_formosus
ENSFHEG00000017452	si:dkey-37o8.1	99	89.800	ENSSMAG00000016143	si:dkey-37o8.1	99	89.800	Scophthalmus_maximus
ENSFHEG00000017452	si:dkey-37o8.1	100	89.934	ENSSDUG00000009163	si:dkey-37o8.1	100	89.934	Seriola_dumerili
ENSFHEG00000017452	si:dkey-37o8.1	100	90.153	ENSSLDG00000023761	si:dkey-37o8.1	100	90.153	Seriola_lalandi_dorsalis
ENSFHEG00000017452	si:dkey-37o8.1	99	70.199	ENSSPUG00000007467	-	99	70.199	Sphenodon_punctatus
ENSFHEG00000017452	si:dkey-37o8.1	99	90.287	ENSSPAG00000013856	si:dkey-37o8.1	99	90.287	Stegastes_partitus
ENSFHEG00000017452	si:dkey-37o8.1	97	88.989	ENSTRUG00000009006	si:dkey-37o8.1	99	88.989	Takifugu_rubripes
ENSFHEG00000017452	si:dkey-37o8.1	98	88.839	ENSTNIG00000017138	si:dkey-37o8.1	97	88.839	Tetraodon_nigroviridis
ENSFHEG00000017452	si:dkey-37o8.1	96	75.854	ENSXETG00000017744	42Sp50	97	74.501	Xenopus_tropicalis
ENSFHEG00000017452	si:dkey-37o8.1	99	93.612	ENSXCOG00000012296	si:dkey-37o8.1	100	98.901	Xiphophorus_couchianus
ENSFHEG00000017452	si:dkey-37o8.1	100	94.092	ENSXMAG00000001998	si:dkey-37o8.1	100	94.092	Xiphophorus_maculatus