EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000017552 (Gene tree)
Gene ID: 105934460
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 64673 bases
Position: chrKN805603.1:1708238-1772910
Accession: 105934460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000015903	SHQ1	PF04925.15	5.3e-65	1	1
ENSFHEP00000015906	SHQ1	PF04925.15	5.8e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000033375	-	5101	XM_012874445	ENSFHEP00000015903	586 (aa)	XP_012729899	UPI000644CC93
ENSFHET00000024153	-	5507	XM_012874462	ENSFHEP00000015906	617 (aa)	XP_012729916	UPI000B39518F

Gene Model

Click here to download ENSFHEG00000017552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017552	shq1	94	53.125	ENSG00000144736	SHQ1	100	78.000	Homo_sapiens
ENSFHEG00000017552	shq1	100	71.333	ENSAPOG00000000397	shq1	98	71.667	Acanthochromis_polyacanthus
ENSFHEG00000017552	shq1	93	52.857	ENSAMEG00000015140	SHQ1	76	60.959	Ailuropoda_melanoleuca
ENSFHEG00000017552	shq1	100	71.309	ENSACIG00000021249	shq1	98	70.470	Amphilophus_citrinellus
ENSFHEG00000017552	shq1	100	72.139	ENSAOCG00000023311	shq1	98	71.973	Amphiprion_ocellaris
ENSFHEG00000017552	shq1	100	71.906	ENSAPEG00000021686	shq1	98	71.906	Amphiprion_percula
ENSFHEG00000017552	shq1	100	69.333	ENSATEG00000008475	shq1	98	69.000	Anabas_testudineus
ENSFHEG00000017552	shq1	74	59.410	ENSAPLG00000013926	SHQ1	86	59.637	Anas_platyrhynchos
ENSFHEG00000017552	shq1	99	48.052	ENSACAG00000014809	SHQ1	83	53.180	Anolis_carolinensis
ENSFHEG00000017552	shq1	80	44.136	ENSANAG00000030500	-	72	45.131	Aotus_nancymaae
ENSFHEG00000017552	shq1	94	54.404	ENSANAG00000029241	SHQ1	75	62.329	Aotus_nancymaae
ENSFHEG00000017552	shq1	100	70.370	ENSACLG00000023077	shq1	95	70.284	Astatotilapia_calliptera
ENSFHEG00000017552	shq1	73	62.763	ENSAMXG00000043822	shq1	75	63.194	Astyanax_mexicanus
ENSFHEG00000017552	shq1	95	52.797	ENSBTAG00000005436	SHQ1	75	61.416	Bos_taurus
ENSFHEG00000017552	shq1	72	30.805	WBGene00021655	Y48A5A.1	92	30.456	Caenorhabditis_elegans
ENSFHEG00000017552	shq1	94	51.973	ENSCJAG00000015131	SHQ1	75	61.644	Callithrix_jacchus
ENSFHEG00000017552	shq1	94	53.076	ENSCAFG00000006434	SHQ1	75	61.187	Canis_familiaris
ENSFHEG00000017552	shq1	94	53.076	ENSCAFG00020016743	SHQ1	75	61.187	Canis_lupus_dingo
ENSFHEG00000017552	shq1	95	52.890	ENSCHIG00000012271	SHQ1	92	50.573	Capra_hircus
ENSFHEG00000017552	shq1	70	57.729	ENSTSYG00000014439	SHQ1	75	58.391	Carlito_syrichta
ENSFHEG00000017552	shq1	85	47.600	ENSCAPG00000009343	SHQ1	91	54.777	Cavia_aperea
ENSFHEG00000017552	shq1	93	52.650	ENSCPOG00000011443	SHQ1	96	53.004	Cavia_porcellus
ENSFHEG00000017552	shq1	70	54.676	ENSCCAG00000027080	SHQ1	73	55.023	Cebus_capucinus
ENSFHEG00000017552	shq1	94	42.004	ENSCCAG00000036087	-	73	46.370	Cebus_capucinus
ENSFHEG00000017552	shq1	94	53.819	ENSCATG00000041238	SHQ1	75	62.100	Cercocebus_atys
ENSFHEG00000017552	shq1	93	52.398	ENSCLAG00000004206	SHQ1	75	60.731	Chinchilla_lanigera
ENSFHEG00000017552	shq1	78	51.148	ENSCSAG00000011514	SHQ1	70	59.312	Chlorocebus_sabaeus
ENSFHEG00000017552	shq1	99	50.493	ENSCPBG00000006441	SHQ1	90	53.737	Chrysemys_picta_bellii
ENSFHEG00000017552	shq1	67	43.284	ENSCING00000008013	-	95	42.793	Ciona_intestinalis
ENSFHEG00000017552	shq1	67	40.000	ENSCSAVG00000002332	-	98	40.000	Ciona_savignyi
ENSFHEG00000017552	shq1	94	54.231	ENSCANG00000039295	SHQ1	98	53.819	Colobus_angolensis_palliatus
ENSFHEG00000017552	shq1	93	52.575	ENSCGRG00001012583	Shq1	77	60.137	Cricetulus_griseus_chok1gshd
ENSFHEG00000017552	shq1	93	52.575	ENSCGRG00000009849	Shq1	77	60.137	Cricetulus_griseus_crigri
ENSFHEG00000017552	shq1	99	64.309	ENSCSEG00000007829	shq1	98	66.393	Cynoglossus_semilaevis
ENSFHEG00000017552	shq1	100	82.935	ENSCVAG00000020049	shq1	99	83.106	Cyprinodon_variegatus
ENSFHEG00000017552	shq1	99	54.395	ENSDARG00000058522	shq1	88	56.071	Danio_rerio
ENSFHEG00000017552	shq1	70	52.758	ENSETEG00000005766	SHQ1	76	53.653	Echinops_telfairi
ENSFHEG00000017552	shq1	63	46.419	ENSEBUG00000005445	shq1	73	48.485	Eptatretus_burgeri
ENSFHEG00000017552	shq1	95	53.152	ENSEASG00005002237	SHQ1	75	63.014	Equus_asinus_asinus
ENSFHEG00000017552	shq1	94	53.754	ENSECAG00000015673	SHQ1	74	63.470	Equus_caballus
ENSFHEG00000017552	shq1	76	60.486	ENSEEUG00000010568	SHQ1	97	53.125	Erinaceus_europaeus
ENSFHEG00000017552	shq1	99	57.496	ENSELUG00000003476	shq1	98	58.557	Esox_lucius
ENSFHEG00000017552	shq1	94	52.220	ENSFCAG00000012781	SHQ1	76	61.187	Felis_catus
ENSFHEG00000017552	shq1	99	50.894	ENSFALG00000013428	SHQ1	71	62.443	Ficedula_albicollis
ENSFHEG00000017552	shq1	70	60.526	ENSFDAG00000005595	SHQ1	67	60.227	Fukomys_damarensis
ENSFHEG00000017552	shq1	67	72.051	ENSGMOG00000007350	shq1	100	72.564	Gadus_morhua
ENSFHEG00000017552	shq1	99	51.882	ENSGALG00000007798	SHQ1	90	55.000	Gallus_gallus
ENSFHEG00000017552	shq1	67	75.385	ENSGACG00000011797	shq1	100	76.154	Gasterosteus_aculeatus
ENSFHEG00000017552	shq1	94	53.646	ENSGGOG00000034818	SHQ1	75	61.872	Gorilla_gorilla
ENSFHEG00000017552	shq1	100	69.865	ENSHBUG00000010857	shq1	98	70.034	Haplochromis_burtoni
ENSFHEG00000017552	shq1	93	53.158	ENSHGLG00000003637	SHQ1	68	59.589	Heterocephalus_glaber_female
ENSFHEG00000017552	shq1	93	53.345	ENSHGLG00100011957	SHQ1	68	59.589	Heterocephalus_glaber_male
ENSFHEG00000017552	shq1	99	61.565	ENSHCOG00000010799	shq1	98	60.684	Hippocampus_comes
ENSFHEG00000017552	shq1	94	52.043	ENSSTOG00000010043	SHQ1	79	59.589	Ictidomys_tridecemlineatus
ENSFHEG00000017552	shq1	94	51.115	ENSJJAG00000017611	Shq1	81	57.849	Jaculus_jaculus
ENSFHEG00000017552	shq1	100	71.088	ENSKMAG00000004457	shq1	98	71.066	Kryptolebias_marmoratus
ENSFHEG00000017552	shq1	74	61.224	ENSLACG00000014243	SHQ1	66	61.224	Latimeria_chalumnae
ENSFHEG00000017552	shq1	99	53.440	ENSLOCG00000009970	shq1	95	56.989	Lepisosteus_oculatus
ENSFHEG00000017552	shq1	94	53.993	ENSMFAG00000039148	SHQ1	97	53.646	Macaca_fascicularis
ENSFHEG00000017552	shq1	93	39.344	ENSMFAG00000037396	-	73	42.227	Macaca_fascicularis
ENSFHEG00000017552	shq1	93	39.344	ENSMMUG00000021761	-	73	42.227	Macaca_mulatta
ENSFHEG00000017552	shq1	86	51.705	ENSMMUG00000009571	SHQ1	70	60.000	Macaca_mulatta
ENSFHEG00000017552	shq1	94	53.993	ENSMNEG00000032667	SHQ1	97	53.646	Macaca_nemestrina
ENSFHEG00000017552	shq1	70	61.631	ENSMLEG00000038493	SHQ1	75	61.644	Mandrillus_leucophaeus
ENSFHEG00000017552	shq1	100	71.078	ENSMAMG00000023432	shq1	95	71.799	Mastacembelus_armatus
ENSFHEG00000017552	shq1	100	70.202	ENSMZEG00005008649	shq1	98	70.370	Maylandia_zebra
ENSFHEG00000017552	shq1	99	51.736	ENSMGAG00000009640	SHQ1	90	54.513	Meleagris_gallopavo
ENSFHEG00000017552	shq1	73	59.909	ENSMAUG00000022030	Shq1	77	60.137	Mesocricetus_auratus
ENSFHEG00000017552	shq1	94	51.020	ENSMICG00000009224	SHQ1	75	60.046	Microcebus_murinus
ENSFHEG00000017552	shq1	73	60.137	ENSMOCG00000017836	Shq1	77	60.137	Microtus_ochrogaster
ENSFHEG00000017552	shq1	99	67.340	ENSMMOG00000010569	shq1	99	66.330	Mola_mola
ENSFHEG00000017552	shq1	80	55.487	ENSMODG00000003926	SHQ1	78	57.955	Monodelphis_domestica
ENSFHEG00000017552	shq1	100	70.202	ENSMALG00000008870	shq1	98	70.202	Monopterus_albus
ENSFHEG00000017552	shq1	93	51.761	MGP_CAROLIEiJ_G0028689	Shq1	76	60.364	Mus_caroli
ENSFHEG00000017552	shq1	93	52.465	ENSMUSG00000035378	Shq1	76	60.592	Mus_musculus
ENSFHEG00000017552	shq1	76	57.802	MGP_PahariEiJ_G0022440	Shq1	76	61.048	Mus_pahari
ENSFHEG00000017552	shq1	79	58.246	MGP_SPRETEiJ_G0029717	Shq1	76	60.137	Mus_spretus
ENSFHEG00000017552	shq1	94	52.548	ENSMPUG00000017006	SHQ1	95	52.724	Mustela_putorius_furo
ENSFHEG00000017552	shq1	89	48.889	ENSMLUG00000013539	SHQ1	74	58.376	Myotis_lucifugus
ENSFHEG00000017552	shq1	94	46.585	ENSNGAG00000023317	Shq1	76	53.613	Nannospalax_galili
ENSFHEG00000017552	shq1	85	67.061	ENSNBRG00000024004	shq1	98	67.921	Neolamprologus_brichardi
ENSFHEG00000017552	shq1	93	54.291	ENSNLEG00000002731	SHQ1	75	61.959	Nomascus_leucogenys
ENSFHEG00000017552	shq1	71	56.481	ENSMEUG00000009350	-	70	56.481	Notamacropus_eugenii
ENSFHEG00000017552	shq1	94	50.446	ENSODEG00000009192	SHQ1	93	55.274	Octodon_degus
ENSFHEG00000017552	shq1	100	70.539	ENSONIG00000020264	shq1	98	70.707	Oreochromis_niloticus
ENSFHEG00000017552	shq1	93	51.142	ENSOCUG00000016695	SHQ1	74	61.416	Oryctolagus_cuniculus
ENSFHEG00000017552	shq1	99	66.263	ENSORLG00000023538	shq1	96	67.800	Oryzias_latipes
ENSFHEG00000017552	shq1	99	66.838	ENSORLG00020003697	shq1	96	67.673	Oryzias_latipes_hni
ENSFHEG00000017552	shq1	99	65.641	ENSORLG00015021040	shq1	96	67.621	Oryzias_latipes_hsok
ENSFHEG00000017552	shq1	99	66.323	ENSOMEG00000001225	shq1	95	68.659	Oryzias_melastigma
ENSFHEG00000017552	shq1	81	58.537	ENSOGAG00000003898	SHQ1	77	60.998	Otolemur_garnettii
ENSFHEG00000017552	shq1	95	52.539	ENSOARG00000009547	SHQ1	75	60.544	Ovis_aries
ENSFHEG00000017552	shq1	94	53.646	ENSPPAG00000027714	SHQ1	75	62.557	Pan_paniscus
ENSFHEG00000017552	shq1	93	40.575	ENSPPAG00000043263	-	73	44.368	Pan_paniscus
ENSFHEG00000017552	shq1	94	53.086	ENSPPRG00000004769	SHQ1	76	61.187	Panthera_pardus
ENSFHEG00000017552	shq1	94	50.890	ENSPTIG00000011478	SHQ1	75	58.430	Panthera_tigris_altaica
ENSFHEG00000017552	shq1	93	39.568	ENSPTRG00000048303	-	73	43.088	Pan_troglodytes
ENSFHEG00000017552	shq1	94	53.646	ENSPTRG00000015106	SHQ1	75	62.557	Pan_troglodytes
ENSFHEG00000017552	shq1	94	52.778	ENSPANG00000002881	SHQ1	75	62.329	Papio_anubis
ENSFHEG00000017552	shq1	99	54.592	ENSPKIG00000021517	shq1	98	53.523	Paramormyrops_kingsleyae
ENSFHEG00000017552	shq1	99	50.739	ENSPSIG00000005536	SHQ1	91	53.584	Pelodiscus_sinensis
ENSFHEG00000017552	shq1	99	60.473	ENSPMGG00000008838	shq1	98	61.591	Periophthalmus_magnuspinnatus
ENSFHEG00000017552	shq1	93	52.724	ENSPEMG00000000251	Shq1	76	61.048	Peromyscus_maniculatus_bairdii
ENSFHEG00000017552	shq1	73	57.991	ENSPMAG00000005372	shq1	94	59.712	Petromyzon_marinus
ENSFHEG00000017552	shq1	94	77.798	ENSPFOG00000003118	shq1	99	78.559	Poecilia_formosa
ENSFHEG00000017552	shq1	79	75.647	ENSPMEG00000011076	shq1	98	76.559	Poecilia_mexicana
ENSFHEG00000017552	shq1	86	74.405	ENSPREG00000000591	shq1	93	75.050	Poecilia_reticulata
ENSFHEG00000017552	shq1	94	52.560	ENSPPYG00000013717	SHQ1	75	62.557	Pongo_abelii
ENSFHEG00000017552	shq1	70	61.429	ENSPCAG00000009035	SHQ1	76	62.100	Procavia_capensis
ENSFHEG00000017552	shq1	70	59.952	ENSPCOG00000008415	SHQ1	75	61.276	Propithecus_coquereli
ENSFHEG00000017552	shq1	94	52.668	ENSPVAG00000017392	SHQ1	76	60.959	Pteropus_vampyrus
ENSFHEG00000017552	shq1	100	70.370	ENSPNYG00000003878	shq1	98	70.370	Pundamilia_nyererei
ENSFHEG00000017552	shq1	99	56.585	ENSPNAG00000026840	shq1	98	56.766	Pygocentrus_nattereri
ENSFHEG00000017552	shq1	73	59.132	ENSRNOG00000005433	Shq1	72	60.820	Rattus_norvegicus
ENSFHEG00000017552	shq1	94	52.539	ENSRBIG00000026280	SHQ1	98	51.761	Rhinopithecus_bieti
ENSFHEG00000017552	shq1	94	54.577	ENSRROG00000034126	SHQ1	98	53.819	Rhinopithecus_roxellana
ENSFHEG00000017552	shq1	70	55.875	ENSSBOG00000021038	SHQ1	73	56.849	Saimiri_boliviensis_boliviensis
ENSFHEG00000017552	shq1	73	59.453	ENSSHAG00000015077	SHQ1	78	59.864	Sarcophilus_harrisii
ENSFHEG00000017552	shq1	99	54.746	ENSSFOG00015016241	shq1	78	66.820	Scleropages_formosus
ENSFHEG00000017552	shq1	99	71.309	ENSSMAG00000016151	shq1	98	71.309	Scophthalmus_maximus
ENSFHEG00000017552	shq1	100	72.231	ENSSDUG00000011986	shq1	98	71.026	Seriola_dumerili
ENSFHEG00000017552	shq1	100	72.213	ENSSLDG00000013908	shq1	98	70.549	Seriola_lalandi_dorsalis
ENSFHEG00000017552	shq1	93	47.133	ENSSARG00000007119	SHQ1	60	59.767	Sorex_araneus
ENSFHEG00000017552	shq1	78	51.496	ENSSPUG00000011526	-	87	51.797	Sphenodon_punctatus
ENSFHEG00000017552	shq1	95	51.795	ENSSSCG00000011518	SHQ1	75	61.416	Sus_scrofa
ENSFHEG00000017552	shq1	70	62.291	ENSTGUG00000009933	SHQ1	76	62.358	Taeniopygia_guttata
ENSFHEG00000017552	shq1	100	64.116	ENSTRUG00000009446	shq1	99	63.158	Takifugu_rubripes
ENSFHEG00000017552	shq1	73	68.837	ENSTNIG00000007354	shq1	96	69.355	Tetraodon_nigroviridis
ENSFHEG00000017552	shq1	62	76.596	ENSTBEG00000011295	SHQ1	55	76.596	Tupaia_belangeri
ENSFHEG00000017552	shq1	94	53.065	ENSTTRG00000005320	SHQ1	98	53.415	Tursiops_truncatus
ENSFHEG00000017552	shq1	93	51.499	ENSUMAG00000024031	SHQ1	74	61.072	Ursus_maritimus
ENSFHEG00000017552	shq1	74	49.779	ENSVPAG00000004880	SHQ1	73	54.359	Vicugna_pacos
ENSFHEG00000017552	shq1	94	52.900	ENSVVUG00000013906	SHQ1	75	61.187	Vulpes_vulpes
ENSFHEG00000017552	shq1	74	61.327	ENSXETG00000032215	shq1	71	61.468	Xenopus_tropicalis