EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000017689 (Gene tree)
Gene ID: 105922817
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 38092 bases
Position: chrKN805549.1:526347-564438
Accession: 105922817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000016027	Exo_endo_phos	PF03372.23	7.2e-14	1	1
ENSFHEP00000016036	Exo_endo_phos	PF03372.23	7.4e-14	1	1
ENSFHEP00000016020	Exo_endo_phos	PF03372.23	7.8e-14	1	1
ENSFHEP00000016027	DUF1866	PF08952.11	2e-55	1	1
ENSFHEP00000016036	DUF1866	PF08952.11	2e-55	1	1
ENSFHEP00000016020	DUF1866	PF08952.11	2.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024279	-	5142	XM_012858770	ENSFHEP00000016020	1638 (aa)	XP_012714224	-
ENSFHET00000024302	-	5249	-	ENSFHEP00000016027	1585 (aa)	-	-
ENSFHET00000024312	-	5273	-	ENSFHEP00000016036	1593 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000017689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017689	synj1	89	64.040	ENSG00000159082	SYNJ1	100	81.844	Homo_sapiens
ENSFHEG00000017689	synj1	74	90.956	ENSAPOG00000002809	synj1	100	84.587	Acanthochromis_polyacanthus
ENSFHEG00000017689	synj1	97	59.352	ENSAMEG00000015028	SYNJ1	93	59.988	Ailuropoda_melanoleuca
ENSFHEG00000017689	synj1	99	79.243	ENSACIG00000008857	synj1	99	86.737	Amphilophus_citrinellus
ENSFHEG00000017689	synj1	99	81.813	ENSAOCG00000009835	synj1	100	86.006	Amphiprion_ocellaris
ENSFHEG00000017689	synj1	99	81.846	ENSAPEG00000021010	synj1	99	80.930	Amphiprion_percula
ENSFHEG00000017689	synj1	99	80.629	ENSATEG00000002306	synj1	99	80.179	Anabas_testudineus
ENSFHEG00000017689	synj1	98	59.737	ENSAPLG00000011832	SYNJ1	68	76.454	Anas_platyrhynchos
ENSFHEG00000017689	synj1	80	67.150	ENSACAG00000003006	-	84	76.481	Anolis_carolinensis
ENSFHEG00000017689	synj1	97	59.729	ENSANAG00000027325	SYNJ1	97	68.098	Aotus_nancymaae
ENSFHEG00000017689	synj1	99	82.555	ENSACLG00000002255	synj1	100	86.232	Astatotilapia_calliptera
ENSFHEG00000017689	synj1	99	74.568	ENSAMXG00000008208	synj1	99	73.106	Astyanax_mexicanus
ENSFHEG00000017689	synj1	98	61.633	ENSBTAG00000003063	SYNJ1	99	65.893	Bos_taurus
ENSFHEG00000017689	synj1	97	60.345	ENSCJAG00000009187	SYNJ1	99	67.616	Callithrix_jacchus
ENSFHEG00000017689	synj1	96	59.461	ENSCAFG00000009041	SYNJ1	100	66.372	Canis_familiaris
ENSFHEG00000017689	synj1	96	61.863	ENSCAFG00020025776	SYNJ1	85	74.776	Canis_lupus_dingo
ENSFHEG00000017689	synj1	85	75.093	ENSCHIG00000005095	SYNJ1	76	73.733	Capra_hircus
ENSFHEG00000017689	synj1	97	61.190	ENSTSYG00000014541	SYNJ1	92	70.501	Carlito_syrichta
ENSFHEG00000017689	synj1	76	61.026	ENSCAPG00000014483	SYNJ1	75	66.635	Cavia_aperea
ENSFHEG00000017689	synj1	96	61.746	ENSCPOG00000012182	SYNJ1	83	75.450	Cavia_porcellus
ENSFHEG00000017689	synj1	90	64.745	ENSCCAG00000020825	SYNJ1	99	65.365	Cebus_capucinus
ENSFHEG00000017689	synj1	89	63.938	ENSCATG00000033891	SYNJ1	92	74.368	Cercocebus_atys
ENSFHEG00000017689	synj1	97	58.733	ENSCLAG00000009796	SYNJ1	100	81.366	Chinchilla_lanigera
ENSFHEG00000017689	synj1	79	67.212	ENSCSAG00000009654	SYNJ1	83	75.247	Chlorocebus_sabaeus
ENSFHEG00000017689	synj1	81	71.753	ENSCHOG00000012390	SYNJ1	54	71.933	Choloepus_hoffmanni
ENSFHEG00000017689	synj1	74	70.040	ENSCPBG00000006402	SYNJ1	96	69.576	Chrysemys_picta_bellii
ENSFHEG00000017689	synj1	96	60.741	ENSCANG00000031359	SYNJ1	92	70.656	Colobus_angolensis_palliatus
ENSFHEG00000017689	synj1	96	61.336	ENSCGRG00001010861	Synj1	99	68.276	Cricetulus_griseus_chok1gshd
ENSFHEG00000017689	synj1	76	67.463	ENSCGRG00000015749	Synj1	100	80.797	Cricetulus_griseus_crigri
ENSFHEG00000017689	synj1	77	86.967	ENSCSEG00000019614	synj1	98	88.471	Cynoglossus_semilaevis
ENSFHEG00000017689	synj1	97	86.904	ENSCVAG00000019250	synj1	99	89.605	Cyprinodon_variegatus
ENSFHEG00000017689	synj1	80	83.100	ENSDARG00000025011	synj1	99	83.158	Danio_rerio
ENSFHEG00000017689	synj1	89	61.661	ENSDNOG00000010732	SYNJ1	68	73.481	Dasypus_novemcinctus
ENSFHEG00000017689	synj1	68	76.923	ENSETEG00000018674	SYNJ1	59	76.923	Echinops_telfairi
ENSFHEG00000017689	synj1	98	61.718	ENSEASG00005006287	SYNJ1	98	77.105	Equus_asinus_asinus
ENSFHEG00000017689	synj1	89	65.680	ENSECAG00000004829	SYNJ1	99	66.494	Equus_caballus
ENSFHEG00000017689	synj1	63	70.632	ENSEEUG00000005150	SYNJ1	62	70.632	Erinaceus_europaeus
ENSFHEG00000017689	synj1	99	70.173	ENSELUG00000009731	synj1	99	68.314	Esox_lucius
ENSFHEG00000017689	synj1	98	60.787	ENSFCAG00000012498	SYNJ1	99	65.287	Felis_catus
ENSFHEG00000017689	synj1	80	50.980	ENSFALG00000004680	SYNJ1	61	69.987	Ficedula_albicollis
ENSFHEG00000017689	synj1	64	84.631	ENSGMOG00000014852	synj1	82	85.113	Gadus_morhua
ENSFHEG00000017689	synj1	96	61.053	ENSGALG00000034317	SYNJ1	84	65.584	Gallus_gallus
ENSFHEG00000017689	synj1	84	90.796	ENSGAFG00000019466	synj1	99	86.267	Gambusia_affinis
ENSFHEG00000017689	synj1	81	81.730	ENSGACG00000020575	synj1	99	83.098	Gasterosteus_aculeatus
ENSFHEG00000017689	synj1	98	60.936	ENSGAGG00000022523	SYNJ1	83	75.605	Gopherus_agassizii
ENSFHEG00000017689	synj1	89	63.655	ENSGGOG00000015945	SYNJ1	99	69.030	Gorilla_gorilla
ENSFHEG00000017689	synj1	99	81.484	ENSHBUG00000007774	synj1	100	86.307	Haplochromis_burtoni
ENSFHEG00000017689	synj1	96	60.127	ENSHGLG00000006420	SYNJ1	100	81.081	Heterocephalus_glaber_female
ENSFHEG00000017689	synj1	97	60.050	ENSHGLG00100012591	SYNJ1	100	81.081	Heterocephalus_glaber_male
ENSFHEG00000017689	synj1	77	93.587	ENSHCOG00000012774	synj1	96	93.587	Hippocampus_comes
ENSFHEG00000017689	synj1	83	82.966	ENSIPUG00000010691	SYNJ1	86	82.062	Ictalurus_punctatus
ENSFHEG00000017689	synj1	96	60.345	ENSSTOG00000015806	SYNJ1	99	65.337	Ictidomys_tridecemlineatus
ENSFHEG00000017689	synj1	97	57.079	ENSJJAG00000020168	Synj1	84	59.859	Jaculus_jaculus
ENSFHEG00000017689	synj1	99	81.012	ENSKMAG00000004221	synj1	87	92.165	Kryptolebias_marmoratus
ENSFHEG00000017689	synj1	92	82.187	ENSLBEG00000015081	synj1	99	82.044	Labrus_bergylta
ENSFHEG00000017689	synj1	68	74.686	ENSLACG00000005928	SYNJ1	70	75.000	Latimeria_chalumnae
ENSFHEG00000017689	synj1	92	67.389	ENSLOCG00000009230	synj1	74	80.889	Lepisosteus_oculatus
ENSFHEG00000017689	synj1	97	59.138	ENSLAFG00000011806	SYNJ1	69	75.453	Loxodonta_africana
ENSFHEG00000017689	synj1	89	64.500	ENSMFAG00000018883	SYNJ1	91	69.412	Macaca_fascicularis
ENSFHEG00000017689	synj1	89	62.851	ENSMMUG00000004624	SYNJ1	83	75.426	Macaca_mulatta
ENSFHEG00000017689	synj1	89	64.575	ENSMNEG00000040077	SYNJ1	79	75.247	Macaca_nemestrina
ENSFHEG00000017689	synj1	89	64.560	ENSMLEG00000037029	SYNJ1	92	70.540	Mandrillus_leucophaeus
ENSFHEG00000017689	synj1	99	81.846	ENSMAMG00000013404	synj1	99	81.317	Mastacembelus_armatus
ENSFHEG00000017689	synj1	99	82.579	ENSMZEG00005024358	synj1	100	88.714	Maylandia_zebra
ENSFHEG00000017689	synj1	95	60.104	ENSMGAG00000014522	SYNJ1	84	63.239	Meleagris_gallopavo
ENSFHEG00000017689	synj1	75	68.093	ENSMAUG00000009743	Synj1	100	80.654	Mesocricetus_auratus
ENSFHEG00000017689	synj1	97	61.849	ENSMICG00000034953	SYNJ1	99	68.801	Microcebus_murinus
ENSFHEG00000017689	synj1	80	83.801	ENSMMOG00000010203	synj1	99	83.597	Mola_mola
ENSFHEG00000017689	synj1	66	71.985	ENSMODG00000021073	SYNJ1	83	71.985	Monodelphis_domestica
ENSFHEG00000017689	synj1	99	80.653	ENSMALG00000014015	synj1	99	78.851	Monopterus_albus
ENSFHEG00000017689	synj1	96	58.745	MGP_CAROLIEiJ_G0020951	Synj1	100	80.939	Mus_caroli
ENSFHEG00000017689	synj1	97	60.429	ENSMUSG00000022973	Synj1	100	81.081	Mus_musculus
ENSFHEG00000017689	synj1	95	60.432	MGP_PahariEiJ_G0016656	Synj1	100	81.081	Mus_pahari
ENSFHEG00000017689	synj1	96	60.905	MGP_SPRETEiJ_G0021857	Synj1	100	81.223	Mus_spretus
ENSFHEG00000017689	synj1	97	58.912	ENSMPUG00000001153	SYNJ1	77	70.656	Mustela_putorius_furo
ENSFHEG00000017689	synj1	59	56.623	ENSMLUG00000005764	-	55	71.235	Myotis_lucifugus
ENSFHEG00000017689	synj1	77	67.244	ENSNGAG00000000453	Synj1	100	81.366	Nannospalax_galili
ENSFHEG00000017689	synj1	99	78.503	ENSNBRG00000011936	synj1	99	80.546	Neolamprologus_brichardi
ENSFHEG00000017689	synj1	84	56.307	ENSNLEG00000003734	SYNJ1	99	63.299	Nomascus_leucogenys
ENSFHEG00000017689	synj1	59	72.727	ENSMEUG00000004158	-	61	72.727	Notamacropus_eugenii
ENSFHEG00000017689	synj1	89	77.576	ENSOPRG00000013602	SYNJ1	82	77.576	Ochotona_princeps
ENSFHEG00000017689	synj1	89	79.076	ENSONIG00000004667	synj1	78	91.300	Oreochromis_niloticus
ENSFHEG00000017689	synj1	80	66.743	ENSOANG00000006929	SYNJ1	83	65.056	Ornithorhynchus_anatinus
ENSFHEG00000017689	synj1	96	59.294	ENSOCUG00000001420	SYNJ1	89	61.483	Oryctolagus_cuniculus
ENSFHEG00000017689	synj1	99	81.344	ENSORLG00000004320	synj1	100	84.837	Oryzias_latipes
ENSFHEG00000017689	synj1	81	84.598	ENSORLG00020011994	synj1	98	83.670	Oryzias_latipes_hni
ENSFHEG00000017689	synj1	98	81.503	ENSORLG00015018077	synj1	95	80.935	Oryzias_latipes_hsok
ENSFHEG00000017689	synj1	98	79.899	ENSOMEG00000014322	synj1	99	84.967	Oryzias_melastigma
ENSFHEG00000017689	synj1	89	60.066	ENSOGAG00000006010	SYNJ1	68	71.850	Otolemur_garnettii
ENSFHEG00000017689	synj1	96	59.963	ENSOARG00000013414	SYNJ1	75	70.497	Ovis_aries
ENSFHEG00000017689	synj1	89	64.040	ENSPPAG00000026784	SYNJ1	99	65.797	Pan_paniscus
ENSFHEG00000017689	synj1	97	61.333	ENSPPRG00000023469	SYNJ1	99	65.287	Panthera_pardus
ENSFHEG00000017689	synj1	97	61.333	ENSPTIG00000007930	SYNJ1	99	65.359	Panthera_tigris_altaica
ENSFHEG00000017689	synj1	89	64.040	ENSPTRG00000048135	-	99	68.945	Pan_troglodytes
ENSFHEG00000017689	synj1	89	63.473	ENSPTRG00000023787	SYNJ1	99	68.945	Pan_troglodytes
ENSFHEG00000017689	synj1	89	64.560	ENSPANG00000022531	SYNJ1	92	70.656	Papio_anubis
ENSFHEG00000017689	synj1	68	83.764	ENSPKIG00000022603	synj1	89	83.764	Paramormyrops_kingsleyae
ENSFHEG00000017689	synj1	99	88.422	ENSPMGG00000016831	synj1	99	86.700	Periophthalmus_magnuspinnatus
ENSFHEG00000017689	synj1	78	67.006	ENSPEMG00000018767	Synj1	100	81.366	Peromyscus_maniculatus_bairdii
ENSFHEG00000017689	synj1	79	51.238	ENSPMAG00000002887	synj1	80	58.534	Petromyzon_marinus
ENSFHEG00000017689	synj1	89	63.183	ENSPCIG00000016372	SYNJ1	81	75.185	Phascolarctos_cinereus
ENSFHEG00000017689	synj1	80	93.182	ENSPFOG00000016886	synj1	100	92.107	Poecilia_formosa
ENSFHEG00000017689	synj1	99	88.128	ENSPLAG00000017559	synj1	100	91.826	Poecilia_latipinna
ENSFHEG00000017689	synj1	99	87.523	ENSPMEG00000007643	synj1	99	87.280	Poecilia_mexicana
ENSFHEG00000017689	synj1	99	87.462	ENSPREG00000012412	synj1	100	90.639	Poecilia_reticulata
ENSFHEG00000017689	synj1	82	66.184	ENSPPYG00000011365	SYNJ1	78	75.067	Pongo_abelii
ENSFHEG00000017689	synj1	52	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSFHEG00000017689	synj1	83	75.123	ENSPCOG00000024841	SYNJ1	94	75.123	Propithecus_coquereli
ENSFHEG00000017689	synj1	77	64.509	ENSPVAG00000000892	SYNJ1	77	67.102	Pteropus_vampyrus
ENSFHEG00000017689	synj1	99	79.455	ENSPNYG00000022989	synj1	100	86.732	Pundamilia_nyererei
ENSFHEG00000017689	synj1	68	86.875	ENSPNAG00000021119	synj1	91	86.875	Pygocentrus_nattereri
ENSFHEG00000017689	synj1	96	60.102	ENSRNOG00000002051	Synj1	85	75.202	Rattus_norvegicus
ENSFHEG00000017689	synj1	89	63.820	ENSRBIG00000034477	SYNJ1	92	70.574	Rhinopithecus_bieti
ENSFHEG00000017689	synj1	89	63.643	ENSRROG00000039256	SYNJ1	92	70.656	Rhinopithecus_roxellana
ENSFHEG00000017689	synj1	96	60.574	ENSSBOG00000021001	SYNJ1	99	65.221	Saimiri_boliviensis_boliviensis
ENSFHEG00000017689	synj1	89	60.870	ENSSHAG00000008538	SYNJ1	83	68.599	Sarcophilus_harrisii
ENSFHEG00000017689	synj1	100	72.939	ENSSFOG00015006095	synj1	99	71.720	Scleropages_formosus
ENSFHEG00000017689	synj1	99	78.723	ENSSMAG00000018066	synj1	98	85.240	Scophthalmus_maximus
ENSFHEG00000017689	synj1	99	82.415	ENSSDUG00000013058	synj1	99	81.655	Seriola_dumerili
ENSFHEG00000017689	synj1	99	82.009	ENSSLDG00000021406	synj1	100	88.306	Seriola_lalandi_dorsalis
ENSFHEG00000017689	synj1	89	64.738	ENSSPUG00000012552	SYNJ1	84	66.351	Sphenodon_punctatus
ENSFHEG00000017689	synj1	97	82.752	ENSSPAG00000006812	SYNJ1	99	82.193	Stegastes_partitus
ENSFHEG00000017689	synj1	99	80.803	ENSSPAG00000017029	synj1	99	85.818	Stegastes_partitus
ENSFHEG00000017689	synj1	96	60.994	ENSSSCG00000012035	SYNJ1	99	66.791	Sus_scrofa
ENSFHEG00000017689	synj1	99	58.195	ENSTGUG00000013445	SYNJ1	85	65.636	Taeniopygia_guttata
ENSFHEG00000017689	synj1	99	76.511	ENSTRUG00000006907	synj1	97	82.543	Takifugu_rubripes
ENSFHEG00000017689	synj1	88	72.691	ENSTNIG00000009940	synj1	99	77.770	Tetraodon_nigroviridis
ENSFHEG00000017689	synj1	88	82.911	ENSTBEG00000016298	SYNJ1	61	82.911	Tupaia_belangeri
ENSFHEG00000017689	synj1	92	76.943	ENSTTRG00000002222	SYNJ1	82	60.379	Tursiops_truncatus
ENSFHEG00000017689	synj1	90	76.710	ENSUAMG00000018606	SYNJ1	99	78.535	Ursus_americanus
ENSFHEG00000017689	synj1	93	76.710	ENSUMAG00000018419	SYNJ1	99	78.535	Ursus_maritimus
ENSFHEG00000017689	synj1	86	81.429	ENSVPAG00000001241	SYNJ1	80	81.429	Vicugna_pacos
ENSFHEG00000017689	synj1	92	63.624	ENSVVUG00000023125	SYNJ1	99	65.407	Vulpes_vulpes
ENSFHEG00000017689	synj1	96	58.090	ENSXETG00000009899	synj1	86	62.561	Xenopus_tropicalis
ENSFHEG00000017689	synj1	80	91.568	ENSXCOG00000011896	synj1	99	90.752	Xiphophorus_couchianus
ENSFHEG00000017689	synj1	99	85.137	ENSXMAG00000017524	synj1	100	90.267	Xiphophorus_maculatus