EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000017748 (Gene tree)
Gene ID: 105928591
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 30487 bases
Position: chrKN811325.1:329072-359558
Accession: 105928591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000016089	RRM_1	PF00076.22	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024389	-	4435	XM_012865928	ENSFHEP00000016089	251 (aa)	XP_012721382	UPI00064513B0

Gene Model

Click here to download ENSFHEG00000017748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000017748	rbm38	86	39.683	ENSFHEG00000021947	celf3b	59	39.683
ENSFHEG00000017748	rbm38	81	31.250	ENSFHEG00000022446	MSI1	87	31.250
ENSFHEG00000017748	rbm38	72	36.620	ENSFHEG00000016786	dazap1	82	36.620
ENSFHEG00000017748	rbm38	98	61.355	ENSFHEG00000006160	-	100	61.024
ENSFHEG00000017748	rbm38	69	31.522	ENSFHEG00000003560	-	88	34.568
ENSFHEG00000017748	rbm38	72	61.458	ENSFHEG00000013449	rbm24a	99	54.435
ENSFHEG00000017748	rbm38	59	45.161	ENSFHEG00000015627	rbm24b	98	41.633
ENSFHEG00000017748	rbm38	86	38.095	ENSFHEG00000012530	celf3a	59	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017748	rbm38	91	57.082	ENSG00000132819	RBM38	91	83.036	Homo_sapiens
ENSFHEG00000017748	rbm38	100	88.048	ENSAPOG00000003301	rbm38	100	88.048	Acanthochromis_polyacanthus
ENSFHEG00000017748	rbm38	98	61.508	ENSAPOG00000009939	-	100	61.569	Acanthochromis_polyacanthus
ENSFHEG00000017748	rbm38	100	85.259	ENSACIG00000000010	rbm38	100	85.259	Amphilophus_citrinellus
ENSFHEG00000017748	rbm38	98	61.753	ENSACIG00000012502	-	100	80.342	Amphilophus_citrinellus
ENSFHEG00000017748	rbm38	100	88.446	ENSAOCG00000013497	-	100	88.446	Amphiprion_ocellaris
ENSFHEG00000017748	rbm38	95	61.667	ENSAOCG00000012559	RBM38	98	62.500	Amphiprion_ocellaris
ENSFHEG00000017748	rbm38	98	60.714	ENSAPEG00000023581	-	100	61.508	Amphiprion_percula
ENSFHEG00000017748	rbm38	100	88.446	ENSAPEG00000013137	rbm38	100	88.446	Amphiprion_percula
ENSFHEG00000017748	rbm38	98	61.508	ENSATEG00000016710	-	100	63.095	Anabas_testudineus
ENSFHEG00000017748	rbm38	100	84.462	ENSATEG00000016366	rbm38	100	84.462	Anabas_testudineus
ENSFHEG00000017748	rbm38	91	57.082	ENSACAG00000016238	RBM38	88	57.082	Anolis_carolinensis
ENSFHEG00000017748	rbm38	91	57.511	ENSANAG00000031959	RBM38	77	91.398	Aotus_nancymaae
ENSFHEG00000017748	rbm38	98	61.417	ENSACLG00000019514	-	100	61.417	Astatotilapia_calliptera
ENSFHEG00000017748	rbm38	95	56.067	ENSAMXG00000038120	rbm38	96	56.067	Astyanax_mexicanus
ENSFHEG00000017748	rbm38	98	59.363	ENSAMXG00000015601	-	100	59.363	Astyanax_mexicanus
ENSFHEG00000017748	rbm38	91	57.940	ENSBTAG00000008105	RBM38	89	57.940	Bos_taurus
ENSFHEG00000017748	rbm38	60	59.333	WBGene00006321	sup-12	78	70.339	Caenorhabditis_elegans
ENSFHEG00000017748	rbm38	91	57.082	ENSCJAG00000019139	RBM38	77	91.398	Callithrix_jacchus
ENSFHEG00000017748	rbm38	91	57.511	ENSCAFG00020021943	RBM38	89	57.511	Canis_lupus_dingo
ENSFHEG00000017748	rbm38	91	57.511	ENSCHIG00000002609	RBM38	89	57.511	Capra_hircus
ENSFHEG00000017748	rbm38	91	57.940	ENSCPOG00000012781	RBM38	89	57.940	Cavia_porcellus
ENSFHEG00000017748	rbm38	91	57.082	ENSCCAG00000036872	RBM38	77	91.398	Cebus_capucinus
ENSFHEG00000017748	rbm38	91	57.940	ENSCATG00000032133	RBM38	77	91.398	Cercocebus_atys
ENSFHEG00000017748	rbm38	91	57.511	ENSCLAG00000005906	RBM38	92	57.511	Chinchilla_lanigera
ENSFHEG00000017748	rbm38	91	57.940	ENSCSAG00000015503	RBM38	89	57.940	Chlorocebus_sabaeus
ENSFHEG00000017748	rbm38	92	55.932	ENSCPBG00000024059	RBM38	99	55.932	Chrysemys_picta_bellii
ENSFHEG00000017748	rbm38	61	62.581	ENSCSAVG00000001132	-	58	62.581	Ciona_savignyi
ENSFHEG00000017748	rbm38	91	45.690	ENSCANG00000030105	-	78	45.690	Colobus_angolensis_palliatus
ENSFHEG00000017748	rbm38	72	64.481	ENSCGRG00001012928	Rbm38	89	57.511	Cricetulus_griseus_chok1gshd
ENSFHEG00000017748	rbm38	84	65.714	ENSCSEG00000020943	rbm38	73	63.393	Cynoglossus_semilaevis
ENSFHEG00000017748	rbm38	98	63.347	ENSCSEG00000004701	-	100	63.889	Cynoglossus_semilaevis
ENSFHEG00000017748	rbm38	100	91.633	ENSCVAG00000015952	rbm38	100	91.633	Cyprinodon_variegatus
ENSFHEG00000017748	rbm38	98	62.948	ENSCVAG00000005472	-	100	61.961	Cyprinodon_variegatus
ENSFHEG00000017748	rbm38	98	63.710	ENSDARG00000058818	rbm38	100	63.710	Danio_rerio
ENSFHEG00000017748	rbm38	91	56.277	ENSDNOG00000032004	RBM38	98	56.277	Dasypus_novemcinctus
ENSFHEG00000017748	rbm38	91	57.511	ENSECAG00000007700	RBM38	89	57.511	Equus_caballus
ENSFHEG00000017748	rbm38	91	55.556	ENSEEUG00000013489	RBM38	89	56.410	Erinaceus_europaeus
ENSFHEG00000017748	rbm38	98	60.547	ENSELUG00000005849	-	100	60.547	Esox_lucius
ENSFHEG00000017748	rbm38	92	68.831	ENSELUG00000000585	-	100	68.831	Esox_lucius
ENSFHEG00000017748	rbm38	75	63.492	ENSFCAG00000042916	RBM38	77	90.323	Felis_catus
ENSFHEG00000017748	rbm38	69	68.391	ENSFALG00000010805	RBM38	88	67.630	Ficedula_albicollis
ENSFHEG00000017748	rbm38	75	65.445	ENSGMOG00000016655	-	100	68.586	Gadus_morhua
ENSFHEG00000017748	rbm38	92	56.780	ENSGALG00000026081	RBM38	99	58.403	Gallus_gallus
ENSFHEG00000017748	rbm38	93	74.359	ENSGACG00000015224	rbm38	100	74.359	Gasterosteus_aculeatus
ENSFHEG00000017748	rbm38	93	59.414	ENSGACG00000009873	-	100	59.414	Gasterosteus_aculeatus
ENSFHEG00000017748	rbm38	92	56.356	ENSGAGG00000001187	RBM38	99	56.356	Gopherus_agassizii
ENSFHEG00000017748	rbm38	100	85.259	ENSHBUG00000012058	rbm38	100	85.259	Haplochromis_burtoni
ENSFHEG00000017748	rbm38	98	61.417	ENSHBUG00000011778	-	100	61.417	Haplochromis_burtoni
ENSFHEG00000017748	rbm38	91	57.511	ENSHGLG00000015077	RBM38	89	57.511	Heterocephalus_glaber_female
ENSFHEG00000017748	rbm38	100	61.508	ENSHCOG00000019040	rbm38	100	61.508	Hippocampus_comes
ENSFHEG00000017748	rbm38	81	65.686	ENSHCOG00000005622	-	57	66.667	Hippocampus_comes
ENSFHEG00000017748	rbm38	98	57.371	ENSIPUG00000019349	-	100	57.371	Ictalurus_punctatus
ENSFHEG00000017748	rbm38	91	74.153	ENSKMAG00000012402	rbm38	99	74.153	Kryptolebias_marmoratus
ENSFHEG00000017748	rbm38	98	61.868	ENSLBEG00000016163	RBM38	100	61.868	Labrus_bergylta
ENSFHEG00000017748	rbm38	100	84.462	ENSLBEG00000018878	rbm38	100	84.462	Labrus_bergylta
ENSFHEG00000017748	rbm38	98	61.446	ENSLOCG00000003456	rbm38	100	61.446	Lepisosteus_oculatus
ENSFHEG00000017748	rbm38	91	57.940	ENSMFAG00000043808	RBM38	77	91.398	Macaca_fascicularis
ENSFHEG00000017748	rbm38	91	57.940	ENSMMUG00000031391	RBM38	77	91.398	Macaca_mulatta
ENSFHEG00000017748	rbm38	91	57.940	ENSMNEG00000034683	RBM38	77	91.398	Macaca_nemestrina
ENSFHEG00000017748	rbm38	100	86.853	ENSMAMG00000024135	rbm38	100	86.853	Mastacembelus_armatus
ENSFHEG00000017748	rbm38	98	62.948	ENSMAMG00000020499	RBM38	100	64.542	Mastacembelus_armatus
ENSFHEG00000017748	rbm38	100	85.259	ENSMZEG00005026036	rbm38	100	85.259	Maylandia_zebra
ENSFHEG00000017748	rbm38	98	61.417	ENSMZEG00005000849	-	100	61.417	Maylandia_zebra
ENSFHEG00000017748	rbm38	72	64.481	ENSMAUG00000021211	Rbm38	89	57.940	Mesocricetus_auratus
ENSFHEG00000017748	rbm38	91	57.082	ENSMICG00000038011	RBM38	98	57.082	Microcebus_murinus
ENSFHEG00000017748	rbm38	72	64.481	ENSMOCG00000008715	Rbm38	89	57.940	Microtus_ochrogaster
ENSFHEG00000017748	rbm38	98	60.317	ENSMMOG00000020051	-	100	62.302	Mola_mola
ENSFHEG00000017748	rbm38	92	56.170	ENSMODG00000016458	RBM38	91	56.170	Monodelphis_domestica
ENSFHEG00000017748	rbm38	100	70.120	ENSMALG00000022327	rbm38	100	70.916	Monopterus_albus
ENSFHEG00000017748	rbm38	75	70.000	ENSMALG00000004680	RBM38	86	62.771	Monopterus_albus
ENSFHEG00000017748	rbm38	91	57.082	MGP_CAROLIEiJ_G0024745	Rbm38	89	57.082	Mus_caroli
ENSFHEG00000017748	rbm38	91	57.082	ENSMUSG00000027510	Rbm38	89	57.082	Mus_musculus
ENSFHEG00000017748	rbm38	91	57.082	MGP_PahariEiJ_G0026186	Rbm38	89	57.082	Mus_pahari
ENSFHEG00000017748	rbm38	91	57.082	MGP_SPRETEiJ_G0025665	Rbm38	89	57.082	Mus_spretus
ENSFHEG00000017748	rbm38	72	64.481	ENSMPUG00000006518	RBM38	89	64.481	Mustela_putorius_furo
ENSFHEG00000017748	rbm38	91	57.265	ENSMLUG00000011140	RBM38	98	57.265	Myotis_lucifugus
ENSFHEG00000017748	rbm38	100	85.657	ENSNBRG00000022685	rbm38	100	85.657	Neolamprologus_brichardi
ENSFHEG00000017748	rbm38	98	61.417	ENSNBRG00000022545	-	100	61.417	Neolamprologus_brichardi
ENSFHEG00000017748	rbm38	91	58.369	ENSODEG00000007980	RBM38	89	58.369	Octodon_degus
ENSFHEG00000017748	rbm38	98	61.265	ENSONIG00000020324	-	100	61.265	Oreochromis_niloticus
ENSFHEG00000017748	rbm38	98	85.366	ENSONIG00000017073	rbm38	100	85.366	Oreochromis_niloticus
ENSFHEG00000017748	rbm38	78	61.421	ENSOANG00000009259	RBM38	75	61.421	Ornithorhynchus_anatinus
ENSFHEG00000017748	rbm38	98	58.661	ENSORLG00000027180	-	100	60.236	Oryzias_latipes
ENSFHEG00000017748	rbm38	100	82.540	ENSORLG00000012154	rbm38	100	82.540	Oryzias_latipes
ENSFHEG00000017748	rbm38	100	83.333	ENSORLG00020017871	rbm38	100	83.333	Oryzias_latipes_hni
ENSFHEG00000017748	rbm38	100	58.140	ENSORLG00020020751	-	100	60.236	Oryzias_latipes_hni
ENSFHEG00000017748	rbm38	100	83.333	ENSORLG00015012606	rbm38	100	83.333	Oryzias_latipes_hsok
ENSFHEG00000017748	rbm38	98	59.761	ENSORLG00015017040	-	100	60.630	Oryzias_latipes_hsok
ENSFHEG00000017748	rbm38	100	82.540	ENSOMEG00000006805	rbm38	100	82.540	Oryzias_melastigma
ENSFHEG00000017748	rbm38	98	59.524	ENSOMEG00000023912	-	100	60.317	Oryzias_melastigma
ENSFHEG00000017748	rbm38	91	57.511	ENSOGAG00000029136	RBM38	88	57.511	Otolemur_garnettii
ENSFHEG00000017748	rbm38	75	63.492	ENSPPRG00000009507	RBM38	77	90.323	Panthera_pardus
ENSFHEG00000017748	rbm38	77	63.077	ENSPTRG00000013661	RBM38	77	91.398	Pan_troglodytes
ENSFHEG00000017748	rbm38	95	47.131	ENSPANG00000033127	-	93	47.131	Papio_anubis
ENSFHEG00000017748	rbm38	91	57.940	ENSPANG00000020919	-	77	91.398	Papio_anubis
ENSFHEG00000017748	rbm38	98	56.693	ENSPKIG00000025417	rbm38	100	58.268	Paramormyrops_kingsleyae
ENSFHEG00000017748	rbm38	98	56.627	ENSPKIG00000018122	-	95	81.081	Paramormyrops_kingsleyae
ENSFHEG00000017748	rbm38	92	55.508	ENSPSIG00000011649	RBM38	91	55.508	Pelodiscus_sinensis
ENSFHEG00000017748	rbm38	98	58.661	ENSPMGG00000017094	-	100	58.140	Periophthalmus_magnuspinnatus
ENSFHEG00000017748	rbm38	100	72.619	ENSPMGG00000011343	rbm38	100	75.397	Periophthalmus_magnuspinnatus
ENSFHEG00000017748	rbm38	92	57.203	ENSPCIG00000013648	RBM38	91	57.203	Phascolarctos_cinereus
ENSFHEG00000017748	rbm38	100	90.945	ENSPFOG00000011658	rbm38	100	93.333	Poecilia_formosa
ENSFHEG00000017748	rbm38	100	92.941	ENSPLAG00000005218	rbm38	100	92.941	Poecilia_latipinna
ENSFHEG00000017748	rbm38	98	61.719	ENSPLAG00000002500	-	100	62.948	Poecilia_latipinna
ENSFHEG00000017748	rbm38	100	90.551	ENSPMEG00000015770	rbm38	100	92.941	Poecilia_mexicana
ENSFHEG00000017748	rbm38	100	90.551	ENSPREG00000007398	rbm38	100	92.941	Poecilia_reticulata
ENSFHEG00000017748	rbm38	91	57.511	ENSPCOG00000026201	RBM38	76	91.398	Propithecus_coquereli
ENSFHEG00000017748	rbm38	72	39.891	ENSPVAG00000006457	RBM38	89	38.961	Pteropus_vampyrus
ENSFHEG00000017748	rbm38	100	84.861	ENSPNYG00000021373	rbm38	100	84.861	Pundamilia_nyererei
ENSFHEG00000017748	rbm38	98	61.417	ENSPNYG00000019727	-	100	80.342	Pundamilia_nyererei
ENSFHEG00000017748	rbm38	94	59.091	ENSPNAG00000010596	rbm38	98	59.091	Pygocentrus_nattereri
ENSFHEG00000017748	rbm38	98	59.761	ENSPNAG00000015123	-	88	80.702	Pygocentrus_nattereri
ENSFHEG00000017748	rbm38	91	58.369	ENSRNOG00000006420	Rbm38	89	58.369	Rattus_norvegicus
ENSFHEG00000017748	rbm38	92	51.931	ENSRROG00000036388	-	88	51.931	Rhinopithecus_roxellana
ENSFHEG00000017748	rbm38	91	57.082	ENSSBOG00000031053	RBM38	87	91.398	Saimiri_boliviensis_boliviensis
ENSFHEG00000017748	rbm38	98	58.800	ENSSFOG00015004453	rbm38	100	58.800	Scleropages_formosus
ENSFHEG00000017748	rbm38	100	87.251	ENSSDUG00000022611	rbm38	100	87.251	Seriola_dumerili
ENSFHEG00000017748	rbm38	98	61.508	ENSSDUG00000021082	RBM38	100	62.302	Seriola_dumerili
ENSFHEG00000017748	rbm38	98	61.111	ENSSLDG00000011778	RBM38	100	61.905	Seriola_lalandi_dorsalis
ENSFHEG00000017748	rbm38	100	87.251	ENSSLDG00000010845	rbm38	100	87.251	Seriola_lalandi_dorsalis
ENSFHEG00000017748	rbm38	98	61.905	ENSSPAG00000020989	RBM38	100	61.905	Stegastes_partitus
ENSFHEG00000017748	rbm38	100	88.446	ENSSPAG00000011113	rbm38	100	88.446	Stegastes_partitus
ENSFHEG00000017748	rbm38	91	57.511	ENSSSCG00000007504	RBM38	89	57.511	Sus_scrofa
ENSFHEG00000017748	rbm38	98	59.761	ENSTRUG00000019869	-	100	60.317	Takifugu_rubripes
ENSFHEG00000017748	rbm38	100	79.681	ENSTRUG00000024954	rbm38	100	80.080	Takifugu_rubripes
ENSFHEG00000017748	rbm38	94	61.345	ENSTNIG00000007093	-	100	61.345	Tetraodon_nigroviridis
ENSFHEG00000017748	rbm38	75	63.492	ENSUAMG00000019780	RBM38	89	57.082	Ursus_americanus
ENSFHEG00000017748	rbm38	91	57.511	ENSVVUG00000017246	RBM38	89	57.511	Vulpes_vulpes
ENSFHEG00000017748	rbm38	76	62.500	ENSXETG00000011268	rbm38	98	55.882	Xenopus_tropicalis
ENSFHEG00000017748	rbm38	52	74.265	ENSXCOG00000017324	-	62	74.265	Xiphophorus_couchianus
ENSFHEG00000017748	rbm38	100	95.618	ENSXMAG00000023662	rbm38	100	95.618	Xiphophorus_maculatus