EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000017824 (Gene tree)
Gene ID: 105929703
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 40600 bases
Position: chrKN811340.1:4833090-4873689
Accession: 105929703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000015894	CPSF_A	PF03178.15	3.3e-100	1	1
ENSFHEP00000015916	CPSF_A	PF03178.15	3.3e-100	1	1
ENSFHEP00000015938	CPSF_A	PF03178.15	3.3e-100	1	1
ENSFHEP00000015951	CPSF_A	PF03178.15	3.3e-100	1	1
ENSFHEP00000031586	CPSF_A	PF03178.15	3.3e-100	1	1
ENSFHEP00000031558	CPSF_A	PF03178.15	5.8e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024174	-	4366	-	ENSFHEP00000015938	1217 (aa)	-	UPI0006449C41
ENSFHET00000024190	-	4366	XM_012867583	ENSFHEP00000015951	1217 (aa)	XP_012723037	UPI0006449C41
ENSFHET00000024214	-	4366	-	ENSFHEP00000031586	1217 (aa)	-	UPI0006449C41
ENSFHET00000033373	-	4366	-	ENSFHEP00000015894	1217 (aa)	-	UPI0006449C41
ENSFHET00000024105	-	3603	-	ENSFHEP00000031558	1200 (aa)	-	-
ENSFHET00000024150	-	4366	-	ENSFHEP00000015916	1217 (aa)	-	UPI0006449C41

Gene Model

Click here to download ENSFHEG00000017824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017824	sf3b3	100	93.016	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSFHEG00000017824	sf3b3	96	98.292	ENSAPOG00000006172	sf3b3	98	98.292	Acanthochromis_polyacanthus
ENSFHEG00000017824	sf3b3	100	92.869	ENSAMEG00000002187	SF3B3	100	92.869	Ailuropoda_melanoleuca
ENSFHEG00000017824	sf3b3	93	95.889	ENSACIG00000016487	sf3b3	99	95.889	Amphilophus_citrinellus
ENSFHEG00000017824	sf3b3	100	98.357	ENSAOCG00000007158	sf3b3	100	98.357	Amphiprion_ocellaris
ENSFHEG00000017824	sf3b3	100	98.357	ENSAPEG00000022786	sf3b3	100	98.357	Amphiprion_percula
ENSFHEG00000017824	sf3b3	100	98.603	ENSATEG00000013708	sf3b3	100	98.603	Anabas_testudineus
ENSFHEG00000017824	sf3b3	81	93.191	ENSAPLG00000004996	SF3B3	99	93.191	Anas_platyrhynchos
ENSFHEG00000017824	sf3b3	100	93.344	ENSACAG00000001817	SF3B3	100	93.344	Anolis_carolinensis
ENSFHEG00000017824	sf3b3	100	93.016	ENSANAG00000028001	SF3B3	100	93.016	Aotus_nancymaae
ENSFHEG00000017824	sf3b3	96	98.292	ENSACLG00000022555	sf3b3	98	98.292	Astatotilapia_calliptera
ENSFHEG00000017824	sf3b3	100	97.617	ENSAMXG00000003410	sf3b3	100	97.617	Astyanax_mexicanus
ENSFHEG00000017824	sf3b3	100	93.016	ENSBTAG00000010627	SF3B3	100	93.016	Bos_taurus
ENSFHEG00000017824	sf3b3	100	60.341	WBGene00019323	teg-4	100	60.341	Caenorhabditis_elegans
ENSFHEG00000017824	sf3b3	100	93.016	ENSCJAG00000014773	SF3B3	99	93.016	Callithrix_jacchus
ENSFHEG00000017824	sf3b3	100	93.098	ENSCAFG00000020151	SF3B3	100	93.098	Canis_familiaris
ENSFHEG00000017824	sf3b3	100	93.098	ENSCAFG00020020912	SF3B3	100	93.098	Canis_lupus_dingo
ENSFHEG00000017824	sf3b3	100	93.098	ENSCHIG00000019822	SF3B3	100	93.098	Capra_hircus
ENSFHEG00000017824	sf3b3	100	93.016	ENSTSYG00000007910	SF3B3	100	93.016	Carlito_syrichta
ENSFHEG00000017824	sf3b3	84	79.176	ENSCAPG00000001484	SF3B3	92	79.176	Cavia_aperea
ENSFHEG00000017824	sf3b3	100	91.701	ENSCPOG00000000586	SF3B3	100	91.701	Cavia_porcellus
ENSFHEG00000017824	sf3b3	100	93.016	ENSCCAG00000017736	SF3B3	100	93.016	Cebus_capucinus
ENSFHEG00000017824	sf3b3	100	93.016	ENSCATG00000036562	SF3B3	100	93.016	Cercocebus_atys
ENSFHEG00000017824	sf3b3	100	93.016	ENSCLAG00000003921	SF3B3	100	93.016	Chinchilla_lanigera
ENSFHEG00000017824	sf3b3	100	93.016	ENSCSAG00000004371	SF3B3	100	93.016	Chlorocebus_sabaeus
ENSFHEG00000017824	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSFHEG00000017824	sf3b3	100	92.687	ENSCPBG00000015853	SF3B3	100	92.687	Chrysemys_picta_bellii
ENSFHEG00000017824	sf3b3	100	79.803	ENSCING00000001342	-	100	79.803	Ciona_intestinalis
ENSFHEG00000017824	sf3b3	99	78.489	ENSCSAVG00000011454	-	100	78.489	Ciona_savignyi
ENSFHEG00000017824	sf3b3	100	89.565	ENSCANG00000042920	SF3B3	100	90.058	Colobus_angolensis_palliatus
ENSFHEG00000017824	sf3b3	100	92.933	ENSCGRG00001015908	Sf3b3	100	92.933	Cricetulus_griseus_chok1gshd
ENSFHEG00000017824	sf3b3	100	92.933	ENSCGRG00000010180	Sf3b3	100	92.933	Cricetulus_griseus_crigri
ENSFHEG00000017824	sf3b3	82	96.507	ENSCSEG00000014192	sf3b3	99	96.507	Cynoglossus_semilaevis
ENSFHEG00000017824	sf3b3	100	99.096	ENSCVAG00000010459	sf3b3	100	99.096	Cyprinodon_variegatus
ENSFHEG00000017824	sf3b3	100	97.288	ENSDARG00000103553	sf3b3	100	97.288	Danio_rerio
ENSFHEG00000017824	sf3b3	86	92.864	ENSDNOG00000043626	SF3B3	100	92.864	Dasypus_novemcinctus
ENSFHEG00000017824	sf3b3	100	93.016	ENSDORG00000014176	Sf3b3	100	93.016	Dipodomys_ordii
ENSFHEG00000017824	sf3b3	100	74.797	FBgn0035162	Sf3b3	100	74.797	Drosophila_melanogaster
ENSFHEG00000017824	sf3b3	84	95.699	ENSETEG00000002729	SF3B3	84	95.699	Echinops_telfairi
ENSFHEG00000017824	sf3b3	100	86.442	ENSEBUG00000006117	sf3b3	100	86.442	Eptatretus_burgeri
ENSFHEG00000017824	sf3b3	100	93.098	ENSEASG00005013376	SF3B3	100	93.098	Equus_asinus_asinus
ENSFHEG00000017824	sf3b3	100	93.098	ENSECAG00000014053	SF3B3	100	93.098	Equus_caballus
ENSFHEG00000017824	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSFHEG00000017824	sf3b3	100	96.066	ENSELUG00000015417	sf3b3	100	96.066	Esox_lucius
ENSFHEG00000017824	sf3b3	100	93.098	ENSFCAG00000009487	SF3B3	100	93.098	Felis_catus
ENSFHEG00000017824	sf3b3	100	92.851	ENSFALG00000007372	SF3B3	100	92.851	Ficedula_albicollis
ENSFHEG00000017824	sf3b3	100	93.016	ENSFDAG00000002608	SF3B3	100	93.016	Fukomys_damarensis
ENSFHEG00000017824	sf3b3	100	93.760	ENSGMOG00000008139	sf3b3	100	93.760	Gadus_morhua
ENSFHEG00000017824	sf3b3	100	93.098	ENSGALG00000002531	SF3B3	100	93.098	Gallus_gallus
ENSFHEG00000017824	sf3b3	100	99.096	ENSGAFG00000015206	sf3b3	100	99.096	Gambusia_affinis
ENSFHEG00000017824	sf3b3	100	97.947	ENSGACG00000002646	sf3b3	100	97.947	Gasterosteus_aculeatus
ENSFHEG00000017824	sf3b3	96	92.827	ENSGAGG00000006746	SF3B3	97	92.827	Gopherus_agassizii
ENSFHEG00000017824	sf3b3	100	93.016	ENSGGOG00000003246	SF3B3	100	93.016	Gorilla_gorilla
ENSFHEG00000017824	sf3b3	93	91.332	ENSHBUG00000005960	sf3b3	99	91.332	Haplochromis_burtoni
ENSFHEG00000017824	sf3b3	100	93.016	ENSHGLG00000010135	SF3B3	100	93.016	Heterocephalus_glaber_female
ENSFHEG00000017824	sf3b3	100	90.916	ENSHGLG00100011148	SF3B3	100	90.916	Heterocephalus_glaber_male
ENSFHEG00000017824	sf3b3	100	97.864	ENSHCOG00000011981	sf3b3	100	97.864	Hippocampus_comes
ENSFHEG00000017824	sf3b3	100	97.453	ENSIPUG00000020435	sf3b3	100	97.453	Ictalurus_punctatus
ENSFHEG00000017824	sf3b3	100	93.016	ENSSTOG00000007065	SF3B3	100	93.016	Ictidomys_tridecemlineatus
ENSFHEG00000017824	sf3b3	100	93.016	ENSJJAG00000003948	Sf3b3	100	93.016	Jaculus_jaculus
ENSFHEG00000017824	sf3b3	100	96.138	ENSKMAG00000004066	sf3b3	99	98.292	Kryptolebias_marmoratus
ENSFHEG00000017824	sf3b3	100	98.603	ENSLBEG00000018302	sf3b3	100	98.603	Labrus_bergylta
ENSFHEG00000017824	sf3b3	98	90.033	ENSLACG00000012501	SF3B3	99	90.033	Latimeria_chalumnae
ENSFHEG00000017824	sf3b3	100	96.634	ENSLOCG00000007566	sf3b3	100	96.634	Lepisosteus_oculatus
ENSFHEG00000017824	sf3b3	100	93.098	ENSLAFG00000012219	SF3B3	100	93.098	Loxodonta_africana
ENSFHEG00000017824	sf3b3	100	93.016	ENSMFAG00000045487	SF3B3	100	93.016	Macaca_fascicularis
ENSFHEG00000017824	sf3b3	100	93.016	ENSMMUG00000017812	SF3B3	100	93.016	Macaca_mulatta
ENSFHEG00000017824	sf3b3	100	93.016	ENSMNEG00000033385	SF3B3	100	93.016	Macaca_nemestrina
ENSFHEG00000017824	sf3b3	100	89.482	ENSMLEG00000043891	SF3B3	100	89.482	Mandrillus_leucophaeus
ENSFHEG00000017824	sf3b3	100	98.685	ENSMAMG00000016837	sf3b3	100	98.685	Mastacembelus_armatus
ENSFHEG00000017824	sf3b3	100	98.357	ENSMZEG00005010836	sf3b3	100	98.357	Maylandia_zebra
ENSFHEG00000017824	sf3b3	90	95.282	ENSMZEG00005026015	sf3b3	99	95.282	Maylandia_zebra
ENSFHEG00000017824	sf3b3	100	93.098	ENSMGAG00000001597	SF3B3	100	93.098	Meleagris_gallopavo
ENSFHEG00000017824	sf3b3	81	76.280	ENSMAUG00000013618	Sf3b3	95	76.654	Mesocricetus_auratus
ENSFHEG00000017824	sf3b3	100	92.043	ENSMICG00000001363	SF3B3	100	92.043	Microcebus_murinus
ENSFHEG00000017824	sf3b3	100	92.933	ENSMOCG00000006108	Sf3b3	100	92.933	Microtus_ochrogaster
ENSFHEG00000017824	sf3b3	90	95.930	ENSMMOG00000002598	sf3b3	97	95.930	Mola_mola
ENSFHEG00000017824	sf3b3	100	88.998	ENSMODG00000014363	SF3B3	100	88.998	Monodelphis_domestica
ENSFHEG00000017824	sf3b3	100	97.946	ENSMALG00000008014	sf3b3	100	97.946	Monopterus_albus
ENSFHEG00000017824	sf3b3	100	92.933	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.933	Mus_caroli
ENSFHEG00000017824	sf3b3	100	92.933	ENSMUSG00000033732	Sf3b3	100	92.933	Mus_musculus
ENSFHEG00000017824	sf3b3	100	92.933	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.933	Mus_spretus
ENSFHEG00000017824	sf3b3	100	93.098	ENSMPUG00000010277	SF3B3	100	93.098	Mustela_putorius_furo
ENSFHEG00000017824	sf3b3	100	92.933	ENSMLUG00000014607	SF3B3	100	92.933	Myotis_lucifugus
ENSFHEG00000017824	sf3b3	100	93.016	ENSNGAG00000021903	Sf3b3	100	93.016	Nannospalax_galili
ENSFHEG00000017824	sf3b3	85	97.143	ENSNBRG00000007197	sf3b3	99	97.143	Neolamprologus_brichardi
ENSFHEG00000017824	sf3b3	100	91.544	ENSNLEG00000016127	SF3B3	100	91.544	Nomascus_leucogenys
ENSFHEG00000017824	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSFHEG00000017824	sf3b3	98	89.941	ENSOPRG00000009847	SF3B3	100	89.941	Ochotona_princeps
ENSFHEG00000017824	sf3b3	100	93.016	ENSODEG00000014154	SF3B3	100	93.016	Octodon_degus
ENSFHEG00000017824	sf3b3	100	98.274	ENSONIG00000011198	sf3b3	100	98.274	Oreochromis_niloticus
ENSFHEG00000017824	sf3b3	100	93.180	ENSOANG00000001161	-	100	93.180	Ornithorhynchus_anatinus
ENSFHEG00000017824	sf3b3	100	91.044	ENSOCUG00000004139	SF3B3	100	91.044	Oryctolagus_cuniculus
ENSFHEG00000017824	sf3b3	100	98.028	ENSORLG00000013472	sf3b3	100	98.028	Oryzias_latipes
ENSFHEG00000017824	sf3b3	100	98.028	ENSORLG00020017473	sf3b3	100	98.028	Oryzias_latipes_hni
ENSFHEG00000017824	sf3b3	100	98.192	ENSORLG00015007710	sf3b3	100	98.192	Oryzias_latipes_hsok
ENSFHEG00000017824	sf3b3	100	97.864	ENSOMEG00000014483	sf3b3	100	97.864	Oryzias_melastigma
ENSFHEG00000017824	sf3b3	100	92.705	ENSOGAG00000016051	SF3B3	100	92.705	Otolemur_garnettii
ENSFHEG00000017824	sf3b3	100	92.869	ENSOARG00000004816	SF3B3	100	92.869	Ovis_aries
ENSFHEG00000017824	sf3b3	100	93.016	ENSPPAG00000026807	SF3B3	100	93.016	Pan_paniscus
ENSFHEG00000017824	sf3b3	100	93.098	ENSPPRG00000001686	SF3B3	100	93.098	Panthera_pardus
ENSFHEG00000017824	sf3b3	91	90.340	ENSPTIG00000020382	SF3B3	100	90.340	Panthera_tigris_altaica
ENSFHEG00000017824	sf3b3	100	93.016	ENSPTRG00000008308	SF3B3	100	93.016	Pan_troglodytes
ENSFHEG00000017824	sf3b3	100	93.016	ENSPANG00000024075	SF3B3	100	93.016	Papio_anubis
ENSFHEG00000017824	sf3b3	100	96.878	ENSPKIG00000002712	sf3b3	100	96.878	Paramormyrops_kingsleyae
ENSFHEG00000017824	sf3b3	91	93.008	ENSPSIG00000002232	SF3B3	100	93.008	Pelodiscus_sinensis
ENSFHEG00000017824	sf3b3	100	92.933	ENSPEMG00000008603	Sf3b3	100	92.933	Peromyscus_maniculatus_bairdii
ENSFHEG00000017824	sf3b3	100	90.304	ENSPMAG00000001793	sf3b3	100	90.304	Petromyzon_marinus
ENSFHEG00000017824	sf3b3	100	93.180	ENSPCIG00000014927	SF3B3	100	93.180	Phascolarctos_cinereus
ENSFHEG00000017824	sf3b3	100	99.507	ENSPFOG00000015516	sf3b3	100	99.507	Poecilia_formosa
ENSFHEG00000017824	sf3b3	100	99.507	ENSPLAG00000014330	sf3b3	100	99.507	Poecilia_latipinna
ENSFHEG00000017824	sf3b3	100	99.589	ENSPMEG00000019856	sf3b3	100	99.589	Poecilia_mexicana
ENSFHEG00000017824	sf3b3	81	99.390	ENSPREG00000019669	sf3b3	97	99.390	Poecilia_reticulata
ENSFHEG00000017824	sf3b3	95	92.795	ENSPPYG00000007539	SF3B3	100	92.795	Pongo_abelii
ENSFHEG00000017824	sf3b3	100	72.391	ENSPCAG00000002623	SF3B3	100	72.391	Procavia_capensis
ENSFHEG00000017824	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSFHEG00000017824	sf3b3	100	93.016	ENSPVAG00000000684	SF3B3	100	93.016	Pteropus_vampyrus
ENSFHEG00000017824	sf3b3	100	98.274	ENSPNYG00000003528	sf3b3	100	98.274	Pundamilia_nyererei
ENSFHEG00000017824	sf3b3	100	97.288	ENSPNAG00000015419	sf3b3	100	97.288	Pygocentrus_nattereri
ENSFHEG00000017824	sf3b3	100	92.933	ENSRNOG00000017724	Sf3b3	100	92.933	Rattus_norvegicus
ENSFHEG00000017824	sf3b3	100	93.016	ENSRBIG00000021904	SF3B3	100	93.016	Rhinopithecus_bieti
ENSFHEG00000017824	sf3b3	100	93.016	ENSRROG00000045703	SF3B3	100	93.016	Rhinopithecus_roxellana
ENSFHEG00000017824	sf3b3	100	93.016	ENSSBOG00000029156	SF3B3	100	93.016	Saimiri_boliviensis_boliviensis
ENSFHEG00000017824	sf3b3	100	93.180	ENSSHAG00000000372	SF3B3	100	93.180	Sarcophilus_harrisii
ENSFHEG00000017824	sf3b3	100	97.042	ENSSFOG00015012877	sf3b3	100	97.042	Scleropages_formosus
ENSFHEG00000017824	sf3b3	100	97.864	ENSSMAG00000014386	sf3b3	100	97.864	Scophthalmus_maximus
ENSFHEG00000017824	sf3b3	100	98.603	ENSSDUG00000021201	sf3b3	100	98.603	Seriola_dumerili
ENSFHEG00000017824	sf3b3	100	98.685	ENSSLDG00000017532	sf3b3	100	98.685	Seriola_lalandi_dorsalis
ENSFHEG00000017824	sf3b3	93	93.015	ENSSARG00000006917	SF3B3	93	93.015	Sorex_araneus
ENSFHEG00000017824	sf3b3	100	92.851	ENSSPUG00000006253	SF3B3	100	92.851	Sphenodon_punctatus
ENSFHEG00000017824	sf3b3	100	90.797	ENSSPAG00000003125	sf3b3	100	90.797	Stegastes_partitus
ENSFHEG00000017824	sf3b3	100	93.098	ENSSSCG00000025323	SF3B3	100	93.098	Sus_scrofa
ENSFHEG00000017824	sf3b3	100	93.021	ENSTGUG00000006082	SF3B3	100	93.021	Taeniopygia_guttata
ENSFHEG00000017824	sf3b3	89	97.702	ENSTNIG00000004857	sf3b3	100	97.702	Tetraodon_nigroviridis
ENSFHEG00000017824	sf3b3	93	78.873	ENSTBEG00000002946	SF3B3	100	78.873	Tupaia_belangeri
ENSFHEG00000017824	sf3b3	100	92.276	ENSTTRG00000005855	SF3B3	100	92.276	Tursiops_truncatus
ENSFHEG00000017824	sf3b3	100	93.098	ENSUAMG00000006780	SF3B3	100	93.098	Ursus_americanus
ENSFHEG00000017824	sf3b3	100	93.098	ENSUMAG00000017757	SF3B3	100	93.098	Ursus_maritimus
ENSFHEG00000017824	sf3b3	100	77.979	ENSVPAG00000003202	SF3B3	100	77.979	Vicugna_pacos
ENSFHEG00000017824	sf3b3	100	93.098	ENSVVUG00000017922	SF3B3	100	93.098	Vulpes_vulpes
ENSFHEG00000017824	sf3b3	100	93.262	ENSXETG00000032869	SF3B3	100	93.262	Xenopus_tropicalis
ENSFHEG00000017824	sf3b3	77	99.363	ENSXCOG00000013628	sf3b3	97	99.363	Xiphophorus_couchianus
ENSFHEG00000017824	sf3b3	100	99.343	ENSXMAG00000006334	sf3b3	100	99.343	Xiphophorus_maculatus