EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000017866 (Gene tree)
Gene ID: 105922755
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 17127 bases
Position: chrKN805549.1:443714-460840
Accession: 105922755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000016213	RRM_1	PF00076.22	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000033510	-	5636	XM_012858684	ENSFHEP00000016213	1230 (aa)	XP_012714138	UPI000644EA79

Gene Model

Click here to download ENSFHEG00000017866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000017866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000017866	scaf4a	76	79.840	ENSAPOG00000002946	scaf4a	100	78.036	Acanthochromis_polyacanthus
ENSFHEG00000017866	scaf4a	89	80.080	ENSAOCG00000000615	scaf4a	100	78.008	Amphiprion_ocellaris
ENSFHEG00000017866	scaf4a	89	79.947	ENSAPEG00000021229	scaf4a	100	77.878	Amphiprion_percula
ENSFHEG00000017866	scaf4a	54	56.285	ENSAPLG00000002509	SCAF4	70	54.522	Anas_platyrhynchos
ENSFHEG00000017866	scaf4a	83	58.430	ENSAMXG00000008585	scaf4a	99	60.281	Astyanax_mexicanus
ENSFHEG00000017866	scaf4a	50	60.000	ENSCCAG00000033727	SCAF4	57	61.154	Cebus_capucinus
ENSFHEG00000017866	scaf4a	95	68.278	ENSCSEG00000019549	scaf4a	66	67.305	Cynoglossus_semilaevis
ENSFHEG00000017866	scaf4a	64	55.597	ENSDARG00000077093	scaf4a	66	58.411	Danio_rerio
ENSFHEG00000017866	scaf4a	66	80.729	ENSELUG00000009909	scaf4a	57	81.152	Esox_lucius
ENSFHEG00000017866	scaf4a	61	60.211	ENSGMOG00000015188	scaf4a	80	58.971	Gadus_morhua
ENSFHEG00000017866	scaf4a	62	86.458	ENSGAFG00000019460	scaf4a	86	85.161	Gambusia_affinis
ENSFHEG00000017866	scaf4a	69	71.472	ENSGACG00000020580	scaf4a	85	71.746	Gasterosteus_aculeatus
ENSFHEG00000017866	scaf4a	61	79.463	ENSHBUG00000007920	scaf4a	66	76.933	Haplochromis_burtoni
ENSFHEG00000017866	scaf4a	59	55.442	ENSIPUG00000011285	scaf4	75	60.903	Ictalurus_punctatus
ENSFHEG00000017866	scaf4a	91	74.633	ENSLBEG00000014675	scaf4a	99	73.930	Labrus_bergylta
ENSFHEG00000017866	scaf4a	53	45.503	ENSLACG00000013913	SCAF4	83	47.073	Latimeria_chalumnae
ENSFHEG00000017866	scaf4a	50	54.945	ENSLOCG00000009162	scaf4a	75	58.534	Lepisosteus_oculatus
ENSFHEG00000017866	scaf4a	75	64.643	ENSMAMG00000013223	scaf4a	55	75.316	Mastacembelus_armatus
ENSFHEG00000017866	scaf4a	93	77.580	ENSMZEG00005024349	scaf4a	67	76.903	Maylandia_zebra
ENSFHEG00000017866	scaf4a	71	74.247	ENSMALG00000013825	scaf4a	93	74.747	Monopterus_albus
ENSFHEG00000017866	scaf4a	78	74.127	ENSONIG00000004687	scaf4a	94	73.575	Oreochromis_niloticus
ENSFHEG00000017866	scaf4a	63	76.455	ENSORLG00000004384	scaf4a	66	74.936	Oryzias_latipes
ENSFHEG00000017866	scaf4a	64	73.257	ENSORLG00020011857	scaf4a	66	72.379	Oryzias_latipes_hni
ENSFHEG00000017866	scaf4a	92	76.326	ENSORLG00015017880	scaf4a	66	74.808	Oryzias_latipes_hsok
ENSFHEG00000017866	scaf4a	63	75.550	ENSOMEG00000014482	scaf4a	65	73.913	Oryzias_melastigma
ENSFHEG00000017866	scaf4a	56	63.073	ENSPKIG00000022408	scaf4a	99	62.803	Paramormyrops_kingsleyae
ENSFHEG00000017866	scaf4a	72	68.952	ENSPMGG00000016741	scaf4a	80	64.609	Periophthalmus_magnuspinnatus
ENSFHEG00000017866	scaf4a	74	83.813	ENSPFOG00000017156	scaf4a	99	82.627	Poecilia_formosa
ENSFHEG00000017866	scaf4a	63	86.065	ENSPLAG00000001972	scaf4a	97	79.623	Poecilia_latipinna
ENSFHEG00000017866	scaf4a	64	56.413	ENSPNAG00000016892	scaf4a	94	61.905	Pygocentrus_nattereri
ENSFHEG00000017866	scaf4a	77	48.271	ENSSFOG00015006338	scaf4a	93	50.651	Scleropages_formosus
ENSFHEG00000017866	scaf4a	89	74.211	ENSSMAG00000017901	scaf4a	65	72.251	Scophthalmus_maximus
ENSFHEG00000017866	scaf4a	56	51.275	ENSSMAG00000003738	scaf4b	76	39.130	Scophthalmus_maximus
ENSFHEG00000017866	scaf4a	90	79.365	ENSSDUG00000012918	scaf4a	64	79.384	Seriola_dumerili
ENSFHEG00000017866	scaf4a	90	79.576	ENSSLDG00000021671	scaf4a	64	79.597	Seriola_lalandi_dorsalis
ENSFHEG00000017866	scaf4a	81	52.070	ENSXETG00000007351	scaf4	72	49.384	Xenopus_tropicalis