EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000018056 (Gene tree)
Gene ID: -
Gene Symbol: rab38b
Alias: si:dkey-76a19.3
Full Name: RAB38b%2C member of RAS oncogene family
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 6111 bases
Position: chrKN805549.1:239783-245893
Accession: ZDB-GENE-091204-345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000031888	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024748	-	369	-	ENSFHEP00000031888	122 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000018056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000018056	rab38b	84	43.137	ENSFHEG00000014924	rab1ba	51	43.137
ENSFHEG00000018056	rab38b	89	49.541	ENSFHEG00000015993	RAB29	53	49.541
ENSFHEG00000018056	rab38b	80	41.237	ENSFHEG00000012702	rab22a	50	41.237
ENSFHEG00000018056	rab38b	81	39.394	ENSFHEG00000018450	RAB14	50	39.394
ENSFHEG00000018056	rab38b	84	44.118	ENSFHEG00000014414	-	50	44.118
ENSFHEG00000018056	rab38b	84	46.602	ENSFHEG00000007101	RAB7A	50	46.602
ENSFHEG00000018056	rab38b	84	44.118	ENSFHEG00000022985	rab1ab	50	44.118
ENSFHEG00000018056	rab38b	84	40.196	ENSFHEG00000021111	rab9a	50	40.196
ENSFHEG00000018056	rab38b	81	40.404	ENSFHEG00000003018	rab25b	51	40.404
ENSFHEG00000018056	rab38b	80	31.633	ENSFHEG00000010055	hrasb	51	31.633
ENSFHEG00000018056	rab38b	84	40.196	ENSFHEG00000013918	rab30	50	40.196
ENSFHEG00000018056	rab38b	88	40.541	ENSFHEG00000019668	rab11a	52	40.541
ENSFHEG00000018056	rab38b	83	47.525	ENSFHEG00000021221	rab13	55	47.525
ENSFHEG00000018056	rab38b	87	42.453	ENSFHEG00000022524	rab6bb	50	42.453
ENSFHEG00000018056	rab38b	86	43.810	ENSFHEG00000004891	rab35b	58	43.810
ENSFHEG00000018056	rab38b	88	37.838	ENSFHEG00000000832	rab11al	53	37.838
ENSFHEG00000018056	rab38b	91	43.243	ENSFHEG00000000767	si:dkey-16l2.16	72	43.243
ENSFHEG00000018056	rab38b	81	42.424	ENSFHEG00000022676	-	52	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000018056	rab38b	88	87.850	ENSAMXG00000036330	RAB38	50	87.850	Astyanax_mexicanus
ENSFHEG00000018056	rab38b	93	90.265	ENSMMOG00000006440	rab38b	53	89.286	Mola_mola
ENSFHEG00000018056	rab38b	93	91.150	ENSMALG00000013514	rab38b	52	91.150	Monopterus_albus
ENSFHEG00000018056	rab38b	93	90.265	ENSPNAG00000017466	rab38b	54	90.265	Pygocentrus_nattereri