EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000018181 (Gene tree)
Gene ID: 105926201
Gene Symbol: -
Alias: -
Full Name: three prime repair exonuclease 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 9038 bases
Position: chrKN811295.1:1658427-1667464
Accession: 105926201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000016489	RNase_T	PF00929.24	3.6e-11	1	1
ENSFHEP00000031958	RNase_T	PF00929.24	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024888	-	3136	XM_012862427	ENSFHEP00000031958	198 (aa)	XP_012717881	A0A147AAV7
ENSFHET00000024880	-	3286	-	ENSFHEP00000016489	198 (aa)	-	A0A147AAV7

Gene Model

Click here to download ENSFHEG00000018181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000018181	-	95	42.408	ENSFHEG00000018188	si:ch1073-296i8.2	77	42.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000018181	-	98	34.052	ENSAOCG00000011593	si:ch1073-296i8.2	83	34.052	Amphiprion_ocellaris
ENSFHEG00000018181	-	98	33.906	ENSAPEG00000012492	si:ch1073-296i8.2	83	33.906	Amphiprion_percula
ENSFHEG00000018181	-	98	62.887	ENSATEG00000021542	si:ch1073-385f13.3	99	62.887	Anabas_testudineus
ENSFHEG00000018181	-	97	41.237	ENSATEG00000021547	si:ch1073-296i8.2	75	41.237	Anabas_testudineus
ENSFHEG00000018181	-	91	62.778	ENSACLG00000023991	-	55	62.778	Astatotilapia_calliptera
ENSFHEG00000018181	-	83	30.102	ENSCLAG00000002698	TREX2	79	30.102	Chinchilla_lanigera
ENSFHEG00000018181	-	89	31.500	ENSCPBG00000008273	TREX2	72	31.500	Chrysemys_picta_bellii
ENSFHEG00000018181	-	96	68.947	ENSCVAG00000001533	-	97	68.947	Cyprinodon_variegatus
ENSFHEG00000018181	-	95	45.263	ENSDARG00000093773	si:ch1073-296i8.2	80	45.263	Danio_rerio
ENSFHEG00000018181	-	91	45.355	ENSDARG00000092584	si:ch1073-385f13.3	75	45.355	Danio_rerio
ENSFHEG00000018181	-	94	52.151	ENSGMOG00000019565	-	98	52.151	Gadus_morhua
ENSFHEG00000018181	-	88	44.318	ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	Gadus_morhua
ENSFHEG00000018181	-	88	43.182	ENSGACG00000007185	si:ch1073-296i8.2	97	43.182	Gasterosteus_aculeatus
ENSFHEG00000018181	-	99	65.306	ENSHBUG00000007541	si:ch1073-385f13.3	100	65.306	Haplochromis_burtoni
ENSFHEG00000018181	-	96	41.146	ENSHCOG00000008574	si:ch1073-296i8.2	80	41.146	Hippocampus_comes
ENSFHEG00000018181	-	99	65.990	ENSKMAG00000015669	-	100	65.990	Kryptolebias_marmoratus
ENSFHEG00000018181	-	99	41.919	ENSKMAG00000015660	si:ch1073-296i8.2	88	41.919	Kryptolebias_marmoratus
ENSFHEG00000018181	-	90	43.407	ENSLBEG00000019623	si:ch1073-296i8.2	71	43.407	Labrus_bergylta
ENSFHEG00000018181	-	93	53.476	ENSLOCG00000014933	-	93	53.476	Lepisosteus_oculatus
ENSFHEG00000018181	-	95	60.638	ENSMAMG00000023075	si:ch1073-385f13.3	97	60.638	Mastacembelus_armatus
ENSFHEG00000018181	-	74	40.541	ENSMMOG00000018979	si:ch1073-296i8.2	69	40.541	Mola_mola
ENSFHEG00000018181	-	96	64.398	ENSMALG00000015952	si:ch1073-385f13.3	98	64.398	Monopterus_albus
ENSFHEG00000018181	-	99	65.306	ENSONIG00000012794	si:ch1073-385f13.3	100	65.306	Oreochromis_niloticus
ENSFHEG00000018181	-	99	71.429	ENSORLG00000030645	si:ch1073-385f13.3	89	71.429	Oryzias_latipes
ENSFHEG00000018181	-	97	40.513	ENSORLG00000023958	si:ch1073-296i8.2	88	40.513	Oryzias_latipes
ENSFHEG00000018181	-	99	71.429	ENSORLG00020021903	-	100	71.429	Oryzias_latipes_hni
ENSFHEG00000018181	-	95	41.053	ENSORLG00020021912	si:ch1073-296i8.2	85	41.053	Oryzias_latipes_hni
ENSFHEG00000018181	-	97	41.026	ENSORLG00015015303	si:ch1073-296i8.2	88	41.026	Oryzias_latipes_hsok
ENSFHEG00000018181	-	96	46.354	ENSPKIG00000023552	-	89	46.354	Paramormyrops_kingsleyae
ENSFHEG00000018181	-	94	64.516	ENSPFOG00000021742	-	98	64.516	Poecilia_formosa
ENSFHEG00000018181	-	98	61.856	ENSPFOG00000005521	si:ch1073-385f13.3	99	61.856	Poecilia_formosa
ENSFHEG00000018181	-	99	62.755	ENSPMEG00000013096	si:ch1073-385f13.3	99	62.755	Poecilia_mexicana
ENSFHEG00000018181	-	96	64.398	ENSPMEG00000013087	si:ch1073-385f13.3	99	64.398	Poecilia_mexicana
ENSFHEG00000018181	-	92	55.714	ENSPREG00000013537	-	80	55.714	Poecilia_reticulata
ENSFHEG00000018181	-	88	50.000	ENSPNAG00000018956	si:ch1073-385f13.3	92	50.000	Pygocentrus_nattereri
ENSFHEG00000018181	-	95	41.361	ENSSMAG00000004874	si:ch1073-296i8.2	73	41.361	Scophthalmus_maximus
ENSFHEG00000018181	-	98	69.231	ENSSLDG00000002379	si:ch1073-385f13.3	99	69.231	Seriola_lalandi_dorsalis
ENSFHEG00000018181	-	95	40.314	ENSSPAG00000012797	si:ch1073-296i8.2	97	40.314	Stegastes_partitus
ENSFHEG00000018181	-	89	45.506	ENSTNIG00000010399	si:ch1073-296i8.2	77	45.506	Tetraodon_nigroviridis
ENSFHEG00000018181	-	99	65.816	ENSXMAG00000021869	si:ch1073-385f13.3	99	65.816	Xiphophorus_maculatus