EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000018232 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 25252 bases
Position: chrKN807026.1:3550-28801
Accession: 105922995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000016532	RRM_1	PF00076.22	7.5e-24	1	2
ENSFHEP00000016532	RRM_1	PF00076.22	7.5e-24	2	2
ENSFHEP00000016538	RRM_1	PF00076.22	2.2e-21	1	2
ENSFHEP00000016538	RRM_1	PF00076.22	2.2e-21	2	2
ENSFHEP00000031989	RRM_1	PF00076.22	6.5e-21	1	2
ENSFHEP00000031989	RRM_1	PF00076.22	6.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000024962	-	1776	XM_012858914	ENSFHEP00000016532	299 (aa)	XP_012714368	-
ENSFHET00000024945	-	1811	-	ENSFHEP00000031989	287 (aa)	-	-
ENSFHET00000024980	-	1592	XM_021314467	ENSFHEP00000016538	292 (aa)	XP_021170142	-

Gene Model

Click here to download ENSFHEG00000018232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000018232	trnau1apa	77	48.498	ENSFHEG00000001267	trnau1apb	75	43.874
ENSFHEG00000018232	trnau1apa	64	30.457	ENSFHEG00000006161	tia1	65	30.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000018232	trnau1apa	86	56.757	ENSG00000180098	TRNAU1AP	79	60.816	Homo_sapiens
ENSFHEG00000018232	trnau1apa	85	87.209	ENSAPOG00000007148	TRNAU1AP	78	88.980	Acanthochromis_polyacanthus
ENSFHEG00000018232	trnau1apa	86	56.371	ENSAMEG00000011367	TRNAU1AP	78	60.905	Ailuropoda_melanoleuca
ENSFHEG00000018232	trnau1apa	88	88.298	ENSACIG00000004161	trnau1apa	81	86.697	Amphilophus_citrinellus
ENSFHEG00000018232	trnau1apa	85	88.327	ENSAOCG00000008056	trnau1apa	77	89.754	Amphiprion_ocellaris
ENSFHEG00000018232	trnau1apa	85	88.327	ENSAPEG00000008868	trnau1apa	79	88.525	Amphiprion_percula
ENSFHEG00000018232	trnau1apa	86	86.312	ENSATEG00000012140	trnau1apa	78	88.259	Anabas_testudineus
ENSFHEG00000018232	trnau1apa	86	56.863	ENSAPLG00000002606	TRNAU1AP	82	59.184	Anas_platyrhynchos
ENSFHEG00000018232	trnau1apa	86	46.718	ENSACAG00000003995	-	78	48.790	Anolis_carolinensis
ENSFHEG00000018232	trnau1apa	86	56.757	ENSANAG00000018976	TRNAU1AP	79	60.816	Aotus_nancymaae
ENSFHEG00000018232	trnau1apa	85	85.992	ENSACLG00000018515	trnau1apa	78	85.366	Astatotilapia_calliptera
ENSFHEG00000018232	trnau1apa	85	55.642	ENSAMXG00000013750	trnau1apa	71	59.111	Astyanax_mexicanus
ENSFHEG00000018232	trnau1apa	85	70.968	ENSAMXG00000029240	-	71	70.968	Astyanax_mexicanus
ENSFHEG00000018232	trnau1apa	86	56.371	ENSBTAG00000010393	TRNAU1AP	79	60.408	Bos_taurus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCJAG00000009717	TRNAU1AP	87	64.103	Callithrix_jacchus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCAFG00000011735	TRNAU1AP	79	60.816	Canis_familiaris
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCAFG00020023584	TRNAU1AP	79	60.816	Canis_lupus_dingo
ENSFHEG00000018232	trnau1apa	86	56.371	ENSCHIG00000023215	TRNAU1AP	79	60.408	Capra_hircus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSTSYG00000003506	TRNAU1AP	87	64.103	Carlito_syrichta
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCPOG00000001925	TRNAU1AP	79	60.816	Cavia_porcellus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCCAG00000037506	TRNAU1AP	87	64.103	Cebus_capucinus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCATG00000044617	TRNAU1AP	87	64.103	Cercocebus_atys
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCLAG00000008223	TRNAU1AP	79	60.816	Chinchilla_lanigera
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCSAG00000001014	TRNAU1AP	79	60.816	Chlorocebus_sabaeus
ENSFHEG00000018232	trnau1apa	86	56.574	ENSCPBG00000000121	TRNAU1AP	79	60.759	Chrysemys_picta_bellii
ENSFHEG00000018232	trnau1apa	57	47.879	ENSCSAVG00000011781	-	84	47.879	Ciona_savignyi
ENSFHEG00000018232	trnau1apa	86	47.876	ENSCANG00000041949	TRNAU1AP	76	51.429	Colobus_angolensis_palliatus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCGRG00001004713	Trnau1ap	79	60.816	Cricetulus_griseus_chok1gshd
ENSFHEG00000018232	trnau1apa	86	56.757	ENSCGRG00000014532	Trnau1ap	79	60.816	Cricetulus_griseus_crigri
ENSFHEG00000018232	trnau1apa	85	75.862	ENSCSEG00000006663	trnau1apa	78	78.000	Cynoglossus_semilaevis
ENSFHEG00000018232	trnau1apa	82	91.026	ENSCVAG00000018069	trnau1apa	78	90.612	Cyprinodon_variegatus
ENSFHEG00000018232	trnau1apa	86	49.225	ENSDARG00000101323	trnau1apa	69	54.185	Danio_rerio
ENSFHEG00000018232	trnau1apa	86	56.757	ENSDNOG00000033009	TRNAU1AP	79	60.816	Dasypus_novemcinctus
ENSFHEG00000018232	trnau1apa	62	56.180	ENSDNOG00000047959	-	88	58.523	Dasypus_novemcinctus
ENSFHEG00000018232	trnau1apa	85	56.800	ENSDORG00000006349	Trnau1ap	98	60.816	Dipodomys_ordii
ENSFHEG00000018232	trnau1apa	74	40.773	FBgn0031607	CG15440	68	40.773	Drosophila_melanogaster
ENSFHEG00000018232	trnau1apa	69	58.291	ENSETEG00000012594	TRNAU1AP	75	61.421	Echinops_telfairi
ENSFHEG00000018232	trnau1apa	64	46.237	ENSEBUG00000006349	-	56	46.914	Eptatretus_burgeri
ENSFHEG00000018232	trnau1apa	86	56.757	ENSEASG00005010062	TRNAU1AP	90	64.103	Equus_asinus_asinus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSECAG00000012980	TRNAU1AP	90	64.103	Equus_caballus
ENSFHEG00000018232	trnau1apa	86	70.992	ENSELUG00000017686	trnau1apa	78	74.797	Esox_lucius
ENSFHEG00000018232	trnau1apa	86	56.757	ENSFCAG00000013401	TRNAU1AP	79	60.816	Felis_catus
ENSFHEG00000018232	trnau1apa	86	55.378	ENSFALG00000001371	TRNAU1AP	79	59.494	Ficedula_albicollis
ENSFHEG00000018232	trnau1apa	86	56.757	ENSFDAG00000018599	TRNAU1AP	79	60.816	Fukomys_damarensis
ENSFHEG00000018232	trnau1apa	77	68.376	ENSGMOG00000016508	trnau1apa	76	68.443	Gadus_morhua
ENSFHEG00000018232	trnau1apa	92	54.044	ENSGALG00000001310	-	87	59.274	Gallus_gallus
ENSFHEG00000018232	trnau1apa	89	88.806	ENSGAFG00000004928	trnau1apa	91	91.429	Gambusia_affinis
ENSFHEG00000018232	trnau1apa	86	82.692	ENSGACG00000001443	trnau1apa	78	85.306	Gasterosteus_aculeatus
ENSFHEG00000018232	trnau1apa	86	56.574	ENSGAGG00000004940	TRNAU1AP	79	59.916	Gopherus_agassizii
ENSFHEG00000018232	trnau1apa	86	56.757	ENSGGOG00000003511	TRNAU1AP	87	64.103	Gorilla_gorilla
ENSFHEG00000018232	trnau1apa	85	87.549	ENSHBUG00000002510	trnau1apa	79	86.992	Haplochromis_burtoni
ENSFHEG00000018232	trnau1apa	86	56.757	ENSHGLG00000010380	TRNAU1AP	79	60.816	Heterocephalus_glaber_female
ENSFHEG00000018232	trnau1apa	86	54.440	ENSHGLG00100012699	TRNAU1AP	79	58.367	Heterocephalus_glaber_male
ENSFHEG00000018232	trnau1apa	86	77.308	ENSHCOG00000014770	trnau1apa	78	79.592	Hippocampus_comes
ENSFHEG00000018232	trnau1apa	86	56.757	ENSSTOG00000000079	TRNAU1AP	79	60.816	Ictidomys_tridecemlineatus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSJJAG00000010128	Trnau1ap	79	60.816	Jaculus_jaculus
ENSFHEG00000018232	trnau1apa	89	84.047	ENSKMAG00000001230	trnau1apa	78	88.525	Kryptolebias_marmoratus
ENSFHEG00000018232	trnau1apa	86	80.075	ENSLBEG00000011683	trnau1apa	78	83.468	Labrus_bergylta
ENSFHEG00000018232	trnau1apa	86	50.000	ENSLACG00000005541	TRNAU1AP	79	53.441	Latimeria_chalumnae
ENSFHEG00000018232	trnau1apa	83	61.044	ENSLOCG00000004041	trnau1apa	80	61.789	Lepisosteus_oculatus
ENSFHEG00000018232	trnau1apa	86	57.143	ENSLAFG00000007628	TRNAU1AP	79	61.224	Loxodonta_africana
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMFAG00000043751	TRNAU1AP	87	64.103	Macaca_fascicularis
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMMUG00000006561	TRNAU1AP	79	60.816	Macaca_mulatta
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMNEG00000044201	TRNAU1AP	87	64.103	Macaca_nemestrina
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMLEG00000015649	TRNAU1AP	87	64.103	Mandrillus_leucophaeus
ENSFHEG00000018232	trnau1apa	86	84.528	ENSMAMG00000001247	trnau1apa	79	86.400	Mastacembelus_armatus
ENSFHEG00000018232	trnau1apa	85	85.992	ENSMZEG00005017722	trnau1apa	78	85.366	Maylandia_zebra
ENSFHEG00000018232	trnau1apa	86	55.952	ENSMGAG00000002105	TRNAU1AP	79	59.664	Meleagris_gallopavo
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMICG00000008386	TRNAU1AP	87	64.103	Microcebus_murinus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMOCG00000011189	Trnau1ap	79	60.816	Microtus_ochrogaster
ENSFHEG00000018232	trnau1apa	82	74.194	ENSMMOG00000012107	trnau1apa	78	76.613	Mola_mola
ENSFHEG00000018232	trnau1apa	86	57.255	ENSMODG00000010927	TRNAU1AP	79	59.677	Monodelphis_domestica
ENSFHEG00000018232	trnau1apa	86	82.890	ENSMALG00000016778	trnau1apa	78	86.640	Monopterus_albus
ENSFHEG00000018232	trnau1apa	80	65.217	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	60.714	Mus_caroli
ENSFHEG00000018232	trnau1apa	80	65.217	ENSMUSG00000028898	Trnau1ap	92	60.714	Mus_musculus
ENSFHEG00000018232	trnau1apa	80	65.217	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSFHEG00000018232	trnau1apa	80	65.217	MGP_SPRETEiJ_G0027544	Trnau1ap	92	60.714	Mus_spretus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMPUG00000015511	TRNAU1AP	79	60.816	Mustela_putorius_furo
ENSFHEG00000018232	trnau1apa	86	56.757	ENSMLUG00000012586	TRNAU1AP	79	60.816	Myotis_lucifugus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSNGAG00000015881	Trnau1ap	79	60.816	Nannospalax_galili
ENSFHEG00000018232	trnau1apa	81	75.431	ENSNBRG00000001758	trnau1apa	73	75.424	Neolamprologus_brichardi
ENSFHEG00000018232	trnau1apa	86	56.757	ENSNLEG00000009822	TRNAU1AP	87	64.103	Nomascus_leucogenys
ENSFHEG00000018232	trnau1apa	86	57.143	ENSMEUG00000006117	TRNAU1AP	79	59.664	Notamacropus_eugenii
ENSFHEG00000018232	trnau1apa	86	56.757	ENSODEG00000002970	TRNAU1AP	79	60.816	Octodon_degus
ENSFHEG00000018232	trnau1apa	85	86.122	ENSONIG00000004715	trnau1apa	91	86.920	Oreochromis_niloticus
ENSFHEG00000018232	trnau1apa	86	42.529	ENSOANG00000005325	-	78	45.344	Ornithorhynchus_anatinus
ENSFHEG00000018232	trnau1apa	86	47.287	ENSOCUG00000006834	-	88	48.560	Oryctolagus_cuniculus
ENSFHEG00000018232	trnau1apa	86	55.212	ENSOCUG00000011704	-	79	59.184	Oryctolagus_cuniculus
ENSFHEG00000018232	trnau1apa	59	62.500	ENSOCUG00000002353	-	60	62.500	Oryctolagus_cuniculus
ENSFHEG00000018232	trnau1apa	82	86.122	ENSORLG00000010428	trnau1apa	78	86.122	Oryzias_latipes
ENSFHEG00000018232	trnau1apa	82	86.122	ENSORLG00020000926	trnau1ap	78	86.122	Oryzias_latipes_hni
ENSFHEG00000018232	trnau1apa	82	86.122	ENSORLG00015009858	trnau1ap	78	86.122	Oryzias_latipes_hsok
ENSFHEG00000018232	trnau1apa	82	85.714	ENSOMEG00000007873	trnau1apa	78	85.714	Oryzias_melastigma
ENSFHEG00000018232	trnau1apa	86	56.757	ENSOGAG00000002274	TRNAU1AP	79	60.816	Otolemur_garnettii
ENSFHEG00000018232	trnau1apa	86	56.371	ENSOARG00000002843	TRNAU1AP	79	60.408	Ovis_aries
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPPAG00000033927	TRNAU1AP	87	64.103	Pan_paniscus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPPRG00000004416	TRNAU1AP	79	60.816	Panthera_pardus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPTIG00000016677	TRNAU1AP	79	60.816	Panthera_tigris_altaica
ENSFHEG00000018232	trnau1apa	54	66.879	ENSPTRG00000000434	-	69	54.673	Pan_troglodytes
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPANG00000016019	TRNAU1AP	87	64.103	Papio_anubis
ENSFHEG00000018232	trnau1apa	86	56.923	ENSPKIG00000015511	trnau1apa	77	59.426	Paramormyrops_kingsleyae
ENSFHEG00000018232	trnau1apa	86	56.972	ENSPSIG00000006864	TRNAU1AP	79	59.916	Pelodiscus_sinensis
ENSFHEG00000018232	trnau1apa	81	73.222	ENSPMGG00000023893	trnau1apa	77	71.545	Periophthalmus_magnuspinnatus
ENSFHEG00000018232	trnau1apa	86	56.371	ENSPEMG00000007877	Trnau1ap	79	60.408	Peromyscus_maniculatus_bairdii
ENSFHEG00000018232	trnau1apa	58	52.907	ENSPMAG00000000592	trnau1apa	95	52.247	Petromyzon_marinus
ENSFHEG00000018232	trnau1apa	80	51.293	ENSPMAG00000005934	trnau1apa	96	50.847	Petromyzon_marinus
ENSFHEG00000018232	trnau1apa	89	87.361	ENSPFOG00000008100	trnau1apa	78	91.429	Poecilia_formosa
ENSFHEG00000018232	trnau1apa	89	87.160	ENSPLAG00000010236	trnau1apa	77	91.416	Poecilia_latipinna
ENSFHEG00000018232	trnau1apa	89	87.160	ENSPMEG00000016387	trnau1apa	74	91.139	Poecilia_mexicana
ENSFHEG00000018232	trnau1apa	72	86.957	ENSPREG00000019821	trnau1apa	74	82.648	Poecilia_reticulata
ENSFHEG00000018232	trnau1apa	79	46.552	ENSPPYG00000001639	-	77	50.459	Pongo_abelii
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPCOG00000027712	-	79	60.816	Propithecus_coquereli
ENSFHEG00000018232	trnau1apa	86	56.757	ENSPVAG00000017214	TRNAU1AP	79	60.816	Pteropus_vampyrus
ENSFHEG00000018232	trnau1apa	87	86.973	ENSPNYG00000010130	trnau1apa	94	86.992	Pundamilia_nyererei
ENSFHEG00000018232	trnau1apa	86	51.362	ENSPNAG00000024905	trnau1apa	64	65.143	Pygocentrus_nattereri
ENSFHEG00000018232	trnau1apa	89	55.639	ENSRNOG00000055344	Trnau1ap	85	57.519	Rattus_norvegicus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSRBIG00000029083	TRNAU1AP	87	64.103	Rhinopithecus_bieti
ENSFHEG00000018232	trnau1apa	86	56.757	ENSRROG00000029128	TRNAU1AP	87	64.103	Rhinopithecus_roxellana
ENSFHEG00000018232	trnau1apa	86	56.757	ENSSBOG00000021299	TRNAU1AP	87	64.103	Saimiri_boliviensis_boliviensis
ENSFHEG00000018232	trnau1apa	86	57.255	ENSSHAG00000008108	TRNAU1AP	79	59.677	Sarcophilus_harrisii
ENSFHEG00000018232	trnau1apa	86	80.228	ENSSMAG00000020851	trnau1apa	78	83.401	Scophthalmus_maximus
ENSFHEG00000018232	trnau1apa	85	84.674	ENSSDUG00000011734	trnau1apa	78	86.694	Seriola_dumerili
ENSFHEG00000018232	trnau1apa	82	69.262	ENSSLDG00000012101	trnau1apa	75	69.262	Seriola_lalandi_dorsalis
ENSFHEG00000018232	trnau1apa	86	56.746	ENSSARG00000007536	TRNAU1AP	79	60.924	Sorex_araneus
ENSFHEG00000018232	trnau1apa	50	50.676	ENSSPUG00000010415	-	67	51.908	Sphenodon_punctatus
ENSFHEG00000018232	trnau1apa	86	54.118	ENSSPUG00000010400	-	79	57.143	Sphenodon_punctatus
ENSFHEG00000018232	trnau1apa	85	86.381	ENSSPAG00000005029	trnau1apa	78	88.525	Stegastes_partitus
ENSFHEG00000018232	trnau1apa	86	56.757	ENSSSCG00000030284	TRNAU1AP	79	60.816	Sus_scrofa
ENSFHEG00000018232	trnau1apa	86	56.349	ENSTGUG00000000735	-	79	60.166	Taeniopygia_guttata
ENSFHEG00000018232	trnau1apa	91	77.455	ENSTRUG00000003352	trnau1apa	78	82.857	Takifugu_rubripes
ENSFHEG00000018232	trnau1apa	81	80.408	ENSTNIG00000006129	trnau1apa	78	80.645	Tetraodon_nigroviridis
ENSFHEG00000018232	trnau1apa	73	50.237	ENSTBEG00000008049	-	75	55.838	Tupaia_belangeri
ENSFHEG00000018232	trnau1apa	86	56.757	ENSTTRG00000001854	TRNAU1AP	79	60.816	Tursiops_truncatus
ENSFHEG00000018232	trnau1apa	86	56.452	ENSUAMG00000008789	TRNAU1AP	79	60.684	Ursus_americanus
ENSFHEG00000018232	trnau1apa	86	57.937	ENSUMAG00000011068	TRNAU1AP	79	60.408	Ursus_maritimus
ENSFHEG00000018232	trnau1apa	86	49.231	ENSVPAG00000006778	TRNAU1AP	80	52.846	Vicugna_pacos
ENSFHEG00000018232	trnau1apa	86	56.746	ENSVVUG00000012518	TRNAU1AP	77	60.816	Vulpes_vulpes
ENSFHEG00000018232	trnau1apa	84	90.400	ENSXMAG00000017361	trnau1apa	78	91.429	Xiphophorus_maculatus