EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000018295 (Gene tree)
Gene ID: 105916333
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 3864 bases
Position: chrKN805698.1:2995678-2999541
Accession: 105916333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000032033	RRM_1	PF00076.22	8.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000025031	PABPN1L-201	1086	XM_012850787	ENSFHEP00000032033	262 (aa)	XP_012706241	UPI000644EA47

Gene Model

Click here to download ENSFHEG00000018295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000018295	PABPN1L	65	58.101	ENSFHEG00000007215	pabpn1	64	59.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000018295	PABPN1L	71	51.980	ENSG00000205022	PABPN1L	58	53.988	Homo_sapiens
ENSFHEG00000018295	PABPN1L	91	90.000	ENSAPOG00000000685	PABPN1L	78	88.333	Acanthochromis_polyacanthus
ENSFHEG00000018295	PABPN1L	91	86.134	ENSACIG00000021400	PABPN1L	98	84.454	Amphilophus_citrinellus
ENSFHEG00000018295	PABPN1L	100	90.875	ENSAOCG00000019844	PABPN1L	100	90.494	Amphiprion_ocellaris
ENSFHEG00000018295	PABPN1L	100	91.255	ENSAPEG00000019534	PABPN1L	100	90.875	Amphiprion_percula
ENSFHEG00000018295	PABPN1L	91	90.756	ENSATEG00000011646	PABPN1L	95	90.756	Anabas_testudineus
ENSFHEG00000018295	PABPN1L	66	58.621	ENSACAG00000013250	PABPN1L	74	60.417	Anolis_carolinensis
ENSFHEG00000018295	PABPN1L	71	51.010	ENSANAG00000038178	PABPN1L	58	54.658	Aotus_nancymaae
ENSFHEG00000018295	PABPN1L	100	85.878	ENSACLG00000025147	PABPN1L	100	88.550	Astatotilapia_calliptera
ENSFHEG00000018295	PABPN1L	71	53.769	ENSCJAG00000045284	PABPN1L	60	53.988	Callithrix_jacchus
ENSFHEG00000018295	PABPN1L	71	51.515	ENSCCAG00000027631	PABPN1L	58	54.037	Cebus_capucinus
ENSFHEG00000018295	PABPN1L	71	52.451	ENSCATG00000031060	PABPN1L	59	53.374	Cercocebus_atys
ENSFHEG00000018295	PABPN1L	100	82.129	ENSCSEG00000001142	pabpn1l	100	82.129	Cynoglossus_semilaevis
ENSFHEG00000018295	PABPN1L	100	93.536	ENSCVAG00000015547	PABPN1L	100	95.057	Cyprinodon_variegatus
ENSFHEG00000018295	PABPN1L	72	49.495	ENSEASG00005000777	PABPN1L	61	51.190	Equus_asinus_asinus
ENSFHEG00000018295	PABPN1L	72	49.741	ENSECAG00000000378	PABPN1L	61	51.190	Equus_caballus
ENSFHEG00000018295	PABPN1L	99	65.649	ENSELUG00000018385	PABPN1L	99	61.686	Esox_lucius
ENSFHEG00000018295	PABPN1L	63	51.149	ENSFCAG00000010465	PABPN1L	59	50.000	Felis_catus
ENSFHEG00000018295	PABPN1L	62	58.896	ENSFALG00000003319	PABPN1L	61	57.616	Ficedula_albicollis
ENSFHEG00000018295	PABPN1L	58	55.696	ENSFDAG00000021067	PABPN1L	60	50.920	Fukomys_damarensis
ENSFHEG00000018295	PABPN1L	100	73.308	ENSGMOG00000001475	PABPN1L	100	74.436	Gadus_morhua
ENSFHEG00000018295	PABPN1L	55	61.111	ENSGALG00000006242	PABPN1L	66	63.248	Gallus_gallus
ENSFHEG00000018295	PABPN1L	100	95.817	ENSGAFG00000012565	PABPN1L	100	95.817	Gambusia_affinis
ENSFHEG00000018295	PABPN1L	100	83.895	ENSGACG00000015428	PABPN1L	100	83.895	Gasterosteus_aculeatus
ENSFHEG00000018295	PABPN1L	71	52.217	ENSGGOG00000012670	PABPN1L	59	53.374	Gorilla_gorilla
ENSFHEG00000018295	PABPN1L	100	88.931	ENSHBUG00000002388	PABPN1L	100	88.931	Haplochromis_burtoni
ENSFHEG00000018295	PABPN1L	100	83.582	ENSHCOG00000004151	PABPN1L	99	83.582	Hippocampus_comes
ENSFHEG00000018295	PABPN1L	66	64.943	ENSIPUG00000023583	PABPN1L	53	82.524	Ictalurus_punctatus
ENSFHEG00000018295	PABPN1L	74	51.031	ENSJJAG00000006433	Pabpn1l	58	51.266	Jaculus_jaculus
ENSFHEG00000018295	PABPN1L	82	90.698	ENSKMAG00000001112	PABPN1L	94	91.549	Kryptolebias_marmoratus
ENSFHEG00000018295	PABPN1L	100	84.528	ENSLBEG00000011647	PABPN1L	97	86.792	Labrus_bergylta
ENSFHEG00000018295	PABPN1L	71	51.980	ENSMFAG00000002924	PABPN1L	59	53.374	Macaca_fascicularis
ENSFHEG00000018295	PABPN1L	71	51.741	ENSMMUG00000012438	PABPN1L	59	53.704	Macaca_mulatta
ENSFHEG00000018295	PABPN1L	71	51.980	ENSMNEG00000044808	PABPN1L	59	53.374	Macaca_nemestrina
ENSFHEG00000018295	PABPN1L	71	52.217	ENSMLEG00000032667	PABPN1L	59	53.374	Mandrillus_leucophaeus
ENSFHEG00000018295	PABPN1L	100	85.878	ENSMZEG00005002186	PABPN1L	100	88.550	Maylandia_zebra
ENSFHEG00000018295	PABPN1L	71	48.515	ENSMICG00000028179	PABPN1L	59	50.307	Microcebus_murinus
ENSFHEG00000018295	PABPN1L	75	91.414	ENSMMOG00000017714	PABPN1L	86	91.414	Mola_mola
ENSFHEG00000018295	PABPN1L	100	85.496	ENSMALG00000016926	PABPN1L	100	85.496	Monopterus_albus
ENSFHEG00000018295	PABPN1L	68	46.602	MGP_CAROLIEiJ_G0031670	Pabpn1l	59	48.765	Mus_caroli
ENSFHEG00000018295	PABPN1L	76	48.113	ENSMUSG00000069867	Pabpn1l	59	49.383	Mus_musculus
ENSFHEG00000018295	PABPN1L	68	46.117	MGP_PahariEiJ_G0023268	Pabpn1l	59	50.000	Mus_pahari
ENSFHEG00000018295	PABPN1L	76	47.642	MGP_SPRETEiJ_G0032788	Pabpn1l	59	49.383	Mus_spretus
ENSFHEG00000018295	PABPN1L	73	47.475	ENSNGAG00000023992	Pabpn1l	60	47.531	Nannospalax_galili
ENSFHEG00000018295	PABPN1L	90	90.295	ENSNBRG00000017078	PABPN1L	100	90.295	Neolamprologus_brichardi
ENSFHEG00000018295	PABPN1L	71	51.244	ENSOPRG00000005597	PABPN1L	59	52.761	Ochotona_princeps
ENSFHEG00000018295	PABPN1L	67	56.250	ENSOANG00000013901	PABPN1L	59	55.215	Ornithorhynchus_anatinus
ENSFHEG00000018295	PABPN1L	100	82.824	ENSORLG00000026560	PABPN1L	100	82.824	Oryzias_latipes
ENSFHEG00000018295	PABPN1L	100	82.443	ENSORLG00020015068	PABPN1L	100	82.443	Oryzias_latipes_hni
ENSFHEG00000018295	PABPN1L	100	82.824	ENSORLG00015000397	PABPN1L	100	82.824	Oryzias_latipes_hsok
ENSFHEG00000018295	PABPN1L	100	82.510	ENSOMEG00000017896	PABPN1L	72	82.510	Oryzias_melastigma
ENSFHEG00000018295	PABPN1L	71	51.485	ENSPPAG00000028866	PABPN1L	58	53.374	Pan_paniscus
ENSFHEG00000018295	PABPN1L	63	51.724	ENSPPRG00000015106	PABPN1L	59	50.000	Panthera_pardus
ENSFHEG00000018295	PABPN1L	63	53.659	ENSPTIG00000015606	PABPN1L	61	51.266	Panthera_tigris_altaica
ENSFHEG00000018295	PABPN1L	71	51.485	ENSPTRG00000031120	PABPN1L	58	53.374	Pan_troglodytes
ENSFHEG00000018295	PABPN1L	71	52.217	ENSPANG00000026039	PABPN1L	59	53.086	Papio_anubis
ENSFHEG00000018295	PABPN1L	61	63.975	ENSPSIG00000003404	PABPN1L	57	71.296	Pelodiscus_sinensis
ENSFHEG00000018295	PABPN1L	81	85.915	ENSPMGG00000013927	PABPN1L	94	85.915	Periophthalmus_magnuspinnatus
ENSFHEG00000018295	PABPN1L	62	51.765	ENSPEMG00000016624	Pabpn1l	60	50.307	Peromyscus_maniculatus_bairdii
ENSFHEG00000018295	PABPN1L	52	60.584	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSFHEG00000018295	PABPN1L	100	96.198	ENSPFOG00000007001	PABPN1L	100	96.198	Poecilia_formosa
ENSFHEG00000018295	PABPN1L	100	96.198	ENSPLAG00000018431	PABPN1L	100	96.198	Poecilia_latipinna
ENSFHEG00000018295	PABPN1L	66	92.697	ENSPMEG00000000169	-	88	92.697	Poecilia_mexicana
ENSFHEG00000018295	PABPN1L	100	96.198	ENSPMEG00000009108	PABPN1L	100	96.198	Poecilia_mexicana
ENSFHEG00000018295	PABPN1L	88	96.970	ENSPREG00000022533	PABPN1L	100	96.970	Poecilia_reticulata
ENSFHEG00000018295	PABPN1L	71	50.249	ENSPPYG00000007655	PABPN1L	58	52.761	Pongo_abelii
ENSFHEG00000018295	PABPN1L	71	50.000	ENSPVAG00000002716	PABPN1L	58	53.012	Pteropus_vampyrus
ENSFHEG00000018295	PABPN1L	100	85.878	ENSPNYG00000004803	PABPN1L	100	88.550	Pundamilia_nyererei
ENSFHEG00000018295	PABPN1L	72	46.734	ENSRNOG00000029558	Pabpn1l	60	49.383	Rattus_norvegicus
ENSFHEG00000018295	PABPN1L	72	51.707	ENSRBIG00000030740	PABPN1L	59	52.761	Rhinopithecus_bieti
ENSFHEG00000018295	PABPN1L	71	51.961	ENSRROG00000032240	-	59	52.761	Rhinopithecus_roxellana
ENSFHEG00000018295	PABPN1L	72	51.707	ENSRROG00000035483	-	59	53.374	Rhinopithecus_roxellana
ENSFHEG00000018295	PABPN1L	71	51.244	ENSSBOG00000018410	PABPN1L	58	54.037	Saimiri_boliviensis_boliviensis
ENSFHEG00000018295	PABPN1L	100	82.090	ENSSMAG00000021348	PABPN1L	100	82.463	Scophthalmus_maximus
ENSFHEG00000018295	PABPN1L	100	88.973	ENSSDUG00000006986	PABPN1L	100	88.593	Seriola_dumerili
ENSFHEG00000018295	PABPN1L	100	89.354	ENSSLDG00000021845	PABPN1L	100	88.973	Seriola_lalandi_dorsalis
ENSFHEG00000018295	PABPN1L	100	89.734	ENSSPAG00000017978	PABPN1L	100	90.114	Stegastes_partitus
ENSFHEG00000018295	PABPN1L	75	42.347	ENSSSCG00000036367	PABPN1L	58	50.610	Sus_scrofa
ENSFHEG00000018295	PABPN1L	100	78.244	ENSTRUG00000024725	PABPN1L	100	78.244	Takifugu_rubripes
ENSFHEG00000018295	PABPN1L	73	93.750	ENSTNIG00000009416	PABPN1L	100	93.750	Tetraodon_nigroviridis
ENSFHEG00000018295	PABPN1L	60	52.663	ENSXETG00000011258	pabpn1l	77	52.023	Xenopus_tropicalis
ENSFHEG00000018295	PABPN1L	88	96.537	ENSXCOG00000003254	PABPN1L	100	96.537	Xiphophorus_couchianus
ENSFHEG00000018295	PABPN1L	81	93.427	ENSXMAG00000029090	PABPN1L	94	93.427	Xiphophorus_maculatus