EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000018713 (Gene tree)
Gene ID: 105932528
Gene Symbol: r3hdm1
Alias: WITHDRAWN: wu:fj35h04|fj35h04|fk85b04|id:ibd5043|sb:eu460|si:ch73-60i13.2|wu:fj35h04|wu:fk85b04
Full Name: R3H domain-containing protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 51316 bases
Position: chrKN811391.1:1672506-1723821
Accession: 105932528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000032295	R3H	PF01424.22	7.2e-13	1	1
ENSFHEP00000017006	R3H	PF01424.22	7.3e-13	1	1
ENSFHEP00000016981	R3H	PF01424.22	7.4e-13	1	1
ENSFHEP00000016976	R3H	PF01424.22	7.8e-13	1	1
ENSFHEP00000017010	R3H	PF01424.22	7.9e-13	1	1
ENSFHEP00000016990	R3H	PF01424.22	9.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000025531	-	3723	-	ENSFHEP00000016981	940 (aa)	-	-
ENSFHET00000025527	-	6108	-	ENSFHEP00000016976	964 (aa)	-	-
ENSFHET00000025571	-	6733	-	ENSFHEP00000017006	934 (aa)	-	A0A146P1S0
ENSFHET00000025574	-	6841	-	ENSFHEP00000017010	970 (aa)	-	-
ENSFHET00000025560	-	6727	-	ENSFHEP00000032295	932 (aa)	-	-
ENSFHET00000025548	-	5130	XM_012871737	ENSFHEP00000016990	1028 (aa)	XP_012727191	UPI000644E0BF

Gene Model

Click here to download ENSFHEG00000018713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000018713	r3hdm1	56	37.205	ENSFHEG00000007936	-	64	44.681
ENSFHEG00000018713	r3hdm1	64	58.790	ENSFHEG00000016484	r3hdm2	78	58.876

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000018713	r3hdm1	91	61.867	ENSG00000048991	R3HDM1	97	65.957	Homo_sapiens
ENSFHEG00000018713	r3hdm1	100	83.429	ENSAPOG00000020850	r3hdm1	96	83.238	Acanthochromis_polyacanthus
ENSFHEG00000018713	r3hdm1	100	47.174	ENSAMEG00000014886	R3HDM1	89	46.253	Ailuropoda_melanoleuca
ENSFHEG00000018713	r3hdm1	100	83.222	ENSAOCG00000005192	r3hdm1	100	83.127	Amphiprion_ocellaris
ENSFHEG00000018713	r3hdm1	100	79.924	ENSAPEG00000016108	r3hdm1	100	80.019	Amphiprion_percula
ENSFHEG00000018713	r3hdm1	100	76.381	ENSATEG00000000232	r3hdm1	100	76.190	Anabas_testudineus
ENSFHEG00000018713	r3hdm1	100	47.692	ENSAPLG00000015231	R3HDM1	89	45.896	Anas_platyrhynchos
ENSFHEG00000018713	r3hdm1	99	48.276	ENSACAG00000001676	R3HDM1	89	47.878	Anolis_carolinensis
ENSFHEG00000018713	r3hdm1	91	62.133	ENSANAG00000035334	R3HDM1	87	57.353	Aotus_nancymaae
ENSFHEG00000018713	r3hdm1	100	74.472	ENSACLG00000027282	r3hdm1	100	74.376	Astatotilapia_calliptera
ENSFHEG00000018713	r3hdm1	88	69.890	ENSAMXG00000003536	r3hdm1	83	68.365	Astyanax_mexicanus
ENSFHEG00000018713	r3hdm1	57	38.652	ENSAMXG00000020587	arpp21	55	54.260	Astyanax_mexicanus
ENSFHEG00000018713	r3hdm1	94	63.680	ENSAMXG00000012861	R3HDM1	89	62.954	Astyanax_mexicanus
ENSFHEG00000018713	r3hdm1	100	47.968	ENSBTAG00000013302	R3HDM1	89	48.609	Bos_taurus
ENSFHEG00000018713	r3hdm1	91	61.867	ENSCJAG00000011718	R3HDM1	87	57.108	Callithrix_jacchus
ENSFHEG00000018713	r3hdm1	100	47.374	ENSCAFG00000005075	R3HDM1	89	46.175	Canis_familiaris
ENSFHEG00000018713	r3hdm1	100	47.572	ENSCAFG00020016119	R3HDM1	99	55.714	Canis_lupus_dingo
ENSFHEG00000018713	r3hdm1	100	47.572	ENSCHIG00000020851	R3HDM1	89	48.289	Capra_hircus
ENSFHEG00000018713	r3hdm1	100	46.686	ENSCPOG00000012784	R3HDM1	100	62.457	Cavia_porcellus
ENSFHEG00000018713	r3hdm1	83	67.949	ENSCCAG00000027199	R3HDM1	81	68.285	Cebus_capucinus
ENSFHEG00000018713	r3hdm1	97	57.443	ENSCATG00000023642	R3HDM1	87	56.863	Cercocebus_atys
ENSFHEG00000018713	r3hdm1	100	47.285	ENSCLAG00000007962	R3HDM1	100	64.846	Chinchilla_lanigera
ENSFHEG00000018713	r3hdm1	100	47.520	ENSCSAG00000016356	R3HDM1	89	48.041	Chlorocebus_sabaeus
ENSFHEG00000018713	r3hdm1	79	65.649	ENSCHOG00000013638	R3HDM1	68	66.406	Choloepus_hoffmanni
ENSFHEG00000018713	r3hdm1	79	71.583	ENSCPBG00000009645	R3HDM1	86	71.583	Chrysemys_picta_bellii
ENSFHEG00000018713	r3hdm1	91	62.133	ENSCANG00000034748	R3HDM1	87	57.353	Colobus_angolensis_palliatus
ENSFHEG00000018713	r3hdm1	99	46.967	ENSCGRG00001012357	R3hdm1	86	47.702	Cricetulus_griseus_chok1gshd
ENSFHEG00000018713	r3hdm1	99	47.059	ENSCGRG00000012080	R3hdm1	100	65.870	Cricetulus_griseus_crigri
ENSFHEG00000018713	r3hdm1	100	68.372	ENSCSEG00000008944	r3hdm1	100	69.388	Cynoglossus_semilaevis
ENSFHEG00000018713	r3hdm1	100	88.116	ENSCVAG00000007582	r3hdm1	100	88.116	Cyprinodon_variegatus
ENSFHEG00000018713	r3hdm1	55	38.033	ENSDARG00000061081	arpp21	85	44.099	Danio_rerio
ENSFHEG00000018713	r3hdm1	100	45.791	ENSDNOG00000000771	R3HDM1	89	44.722	Dasypus_novemcinctus
ENSFHEG00000018713	r3hdm1	92	55.621	ENSETEG00000013606	R3HDM1	89	43.228	Echinops_telfairi
ENSFHEG00000018713	r3hdm1	91	59.666	ENSEASG00005007392	R3HDM1	88	60.143	Equus_asinus_asinus
ENSFHEG00000018713	r3hdm1	91	59.666	ENSECAG00000019114	R3HDM1	88	60.143	Equus_caballus
ENSFHEG00000018713	r3hdm1	62	52.390	ENSEEUG00000012589	R3HDM1	56	50.622	Erinaceus_europaeus
ENSFHEG00000018713	r3hdm1	87	48.723	ENSELUG00000014413	r3hdm1	83	50.266	Esox_lucius
ENSFHEG00000018713	r3hdm1	95	51.362	ENSELUG00000004909	R3HDM1	85	52.302	Esox_lucius
ENSFHEG00000018713	r3hdm1	91	59.905	ENSFCAG00000027113	R3HDM1	88	60.859	Felis_catus
ENSFHEG00000018713	r3hdm1	89	48.613	ENSFALG00000013731	R3HDM1	90	44.287	Ficedula_albicollis
ENSFHEG00000018713	r3hdm1	100	47.088	ENSFDAG00000016478	R3HDM1	100	65.188	Fukomys_damarensis
ENSFHEG00000018713	r3hdm1	64	61.620	ENSGMOG00000006042	-	79	57.857	Gadus_morhua
ENSFHEG00000018713	r3hdm1	84	65.132	ENSGALG00000012246	R3HDM1	84	64.474	Gallus_gallus
ENSFHEG00000018713	r3hdm1	100	80.542	ENSGAFG00000006203	r3hdm1	100	80.542	Gambusia_affinis
ENSFHEG00000018713	r3hdm1	94	78.002	ENSGACG00000014925	r3hdm1	95	78.002	Gasterosteus_aculeatus
ENSFHEG00000018713	r3hdm1	91	60.784	ENSGAGG00000007840	R3HDM1	84	60.784	Gopherus_agassizii
ENSFHEG00000018713	r3hdm1	91	61.867	ENSGGOG00000008156	R3HDM1	99	46.415	Gorilla_gorilla
ENSFHEG00000018713	r3hdm1	57	82.375	ENSHBUG00000015737	R3HDM1	96	82.375	Haplochromis_burtoni
ENSFHEG00000018713	r3hdm1	100	47.321	ENSHGLG00000015718	R3HDM1	100	65.068	Heterocephalus_glaber_female
ENSFHEG00000018713	r3hdm1	100	47.222	ENSHGLG00100003184	-	100	65.411	Heterocephalus_glaber_male
ENSFHEG00000018713	r3hdm1	84	45.188	ENSHGLG00100015374	-	84	39.209	Heterocephalus_glaber_male
ENSFHEG00000018713	r3hdm1	100	64.779	ENSHCOG00000013366	r3hdm1	100	64.587	Hippocampus_comes
ENSFHEG00000018713	r3hdm1	91	62.903	ENSIPUG00000013629	r3hdm1	82	68.954	Ictalurus_punctatus
ENSFHEG00000018713	r3hdm1	92	61.098	ENSIPUG00000001676	R3HDM1	100	61.220	Ictalurus_punctatus
ENSFHEG00000018713	r3hdm1	71	37.746	ENSIPUG00000020552	arpp21	87	38.764	Ictalurus_punctatus
ENSFHEG00000018713	r3hdm1	100	47.676	ENSSTOG00000007572	R3HDM1	100	65.529	Ictidomys_tridecemlineatus
ENSFHEG00000018713	r3hdm1	52	76.434	ENSLBEG00000027981	-	99	81.441	Labrus_bergylta
ENSFHEG00000018713	r3hdm1	95	50.789	ENSLACG00000005334	R3HDM1	83	61.905	Latimeria_chalumnae
ENSFHEG00000018713	r3hdm1	99	50.928	ENSLOCG00000001641	r3hdm1	90	51.389	Lepisosteus_oculatus
ENSFHEG00000018713	r3hdm1	86	65.732	ENSLAFG00000009065	R3HDM1	85	65.341	Loxodonta_africana
ENSFHEG00000018713	r3hdm1	100	47.683	ENSMFAG00000030331	R3HDM1	88	61.337	Macaca_fascicularis
ENSFHEG00000018713	r3hdm1	100	47.320	ENSMMUG00000009844	R3HDM1	87	57.108	Macaca_mulatta
ENSFHEG00000018713	r3hdm1	100	47.786	ENSMNEG00000027793	R3HDM1	88	61.337	Macaca_nemestrina
ENSFHEG00000018713	r3hdm1	100	47.683	ENSMLEG00000043189	R3HDM1	87	57.108	Mandrillus_leucophaeus
ENSFHEG00000018713	r3hdm1	100	80.553	ENSMAMG00000004532	r3hdm1	100	80.362	Mastacembelus_armatus
ENSFHEG00000018713	r3hdm1	100	80.344	ENSMZEG00005003157	r3hdm1	100	80.248	Maylandia_zebra
ENSFHEG00000018713	r3hdm1	100	47.428	ENSMGAG00000012461	R3HDM1	88	45.429	Meleagris_gallopavo
ENSFHEG00000018713	r3hdm1	99	47.032	ENSMAUG00000010315	R3hdm1	100	65.870	Mesocricetus_auratus
ENSFHEG00000018713	r3hdm1	90	61.600	ENSMICG00000005900	-	87	56.863	Microcebus_murinus
ENSFHEG00000018713	r3hdm1	91	61.333	ENSMICG00000042655	-	92	56.618	Microcebus_murinus
ENSFHEG00000018713	r3hdm1	54	58.286	ENSMOCG00000019833	-	100	65.529	Microtus_ochrogaster
ENSFHEG00000018713	r3hdm1	100	46.538	ENSMODG00000000923	R3HDM1	96	46.600	Monodelphis_domestica
ENSFHEG00000018713	r3hdm1	100	77.799	ENSMALG00000009000	r3hdm1	90	77.799	Monopterus_albus
ENSFHEG00000018713	r3hdm1	99	46.452	MGP_CAROLIEiJ_G0014543	R3hdm1	100	65.870	Mus_caroli
ENSFHEG00000018713	r3hdm1	99	46.728	ENSMUSG00000056211	R3hdm1	100	65.870	Mus_musculus
ENSFHEG00000018713	r3hdm1	99	46.544	MGP_PahariEiJ_G0027779	R3hdm1	100	65.870	Mus_pahari
ENSFHEG00000018713	r3hdm1	99	46.636	MGP_SPRETEiJ_G0015350	R3hdm1	100	65.870	Mus_spretus
ENSFHEG00000018713	r3hdm1	100	47.271	ENSMPUG00000002412	R3HDM1	89	47.186	Mustela_putorius_furo
ENSFHEG00000018713	r3hdm1	99	45.725	ENSMLUG00000013824	R3HDM1	89	46.218	Myotis_lucifugus
ENSFHEG00000018713	r3hdm1	100	47.790	ENSNLEG00000008622	R3HDM1	87	57.108	Nomascus_leucogenys
ENSFHEG00000018713	r3hdm1	94	42.957	ENSMEUG00000011784	R3HDM1	93	42.190	Notamacropus_eugenii
ENSFHEG00000018713	r3hdm1	100	46.521	ENSODEG00000008607	R3HDM1	100	64.505	Octodon_degus
ENSFHEG00000018713	r3hdm1	95	75.444	ENSONIG00000012017	r3hdm1	89	75.123	Oreochromis_niloticus
ENSFHEG00000018713	r3hdm1	100	46.578	ENSOANG00000007987	R3HDM1	89	45.961	Ornithorhynchus_anatinus
ENSFHEG00000018713	r3hdm1	100	47.174	ENSOCUG00000017366	R3HDM1	97	45.918	Oryctolagus_cuniculus
ENSFHEG00000018713	r3hdm1	100	73.014	ENSORLG00000004297	r3hdm1	100	73.684	Oryzias_latipes
ENSFHEG00000018713	r3hdm1	100	73.639	ENSORLG00015017355	r3hdm1	100	74.308	Oryzias_latipes_hsok
ENSFHEG00000018713	r3hdm1	57	77.656	ENSOMEG00000003882	-	99	78.519	Oryzias_melastigma
ENSFHEG00000018713	r3hdm1	99	46.024	ENSOGAG00000003136	R3HDM1	89	46.240	Otolemur_garnettii
ENSFHEG00000018713	r3hdm1	100	47.374	ENSOARG00000010788	R3HDM1	89	46.648	Ovis_aries
ENSFHEG00000018713	r3hdm1	91	61.867	ENSPPAG00000027858	R3HDM1	87	57.108	Pan_paniscus
ENSFHEG00000018713	r3hdm1	91	61.333	ENSPPRG00000002626	R3HDM1	87	56.618	Panthera_pardus
ENSFHEG00000018713	r3hdm1	91	61.600	ENSPTIG00000016581	R3HDM1	87	56.863	Panthera_tigris_altaica
ENSFHEG00000018713	r3hdm1	91	61.867	ENSPTRG00000012494	R3HDM1	87	57.108	Pan_troglodytes
ENSFHEG00000018713	r3hdm1	100	47.683	ENSPANG00000026448	R3HDM1	87	57.108	Papio_anubis
ENSFHEG00000018713	r3hdm1	84	73.203	ENSPKIG00000004328	r3hdm1	78	72.222	Paramormyrops_kingsleyae
ENSFHEG00000018713	r3hdm1	100	47.741	ENSPSIG00000012915	R3HDM1	88	46.623	Pelodiscus_sinensis
ENSFHEG00000018713	r3hdm1	99	46.728	ENSPEMG00000015187	R3hdm1	100	65.529	Peromyscus_maniculatus_bairdii
ENSFHEG00000018713	r3hdm1	86	41.348	ENSPMAG00000003369	-	95	39.757	Petromyzon_marinus
ENSFHEG00000018713	r3hdm1	87	64.809	ENSPCIG00000002491	R3HDM1	88	60.808	Phascolarctos_cinereus
ENSFHEG00000018713	r3hdm1	100	87.428	ENSPFOG00000015036	r3hdm1	100	87.044	Poecilia_formosa
ENSFHEG00000018713	r3hdm1	100	81.099	ENSPLAG00000018042	r3hdm1	100	80.714	Poecilia_latipinna
ENSFHEG00000018713	r3hdm1	100	80.636	ENSPMEG00000023947	r3hdm1	100	80.347	Poecilia_mexicana
ENSFHEG00000018713	r3hdm1	100	87.187	ENSPREG00000007902	r3hdm1	100	86.898	Poecilia_reticulata
ENSFHEG00000018713	r3hdm1	100	46.769	ENSPPYG00000012815	R3HDM1	89	45.767	Pongo_abelii
ENSFHEG00000018713	r3hdm1	93	59.226	ENSPCAG00000006208	R3HDM1	75	60.237	Procavia_capensis
ENSFHEG00000018713	r3hdm1	81	70.758	ENSPCOG00000012698	R3HDM1	79	70.758	Propithecus_coquereli
ENSFHEG00000018713	r3hdm1	99	38.561	ENSPVAG00000006098	R3HDM1	89	40.833	Pteropus_vampyrus
ENSFHEG00000018713	r3hdm1	75	71.569	ENSPNAG00000005436	R3HDM1	87	70.957	Pygocentrus_nattereri
ENSFHEG00000018713	r3hdm1	72	44.034	ENSPNAG00000004162	arpp21	91	45.042	Pygocentrus_nattereri
ENSFHEG00000018713	r3hdm1	85	69.916	ENSPNAG00000013952	r3hdm1	89	62.295	Pygocentrus_nattereri
ENSFHEG00000018713	r3hdm1	99	46.623	ENSRNOG00000004099	R3hdm1	89	47.300	Rattus_norvegicus
ENSFHEG00000018713	r3hdm1	100	46.660	ENSRBIG00000033317	R3HDM1	86	70.863	Rhinopithecus_bieti
ENSFHEG00000018713	r3hdm1	100	47.531	ENSRROG00000034534	R3HDM1	87	57.108	Rhinopithecus_roxellana
ENSFHEG00000018713	r3hdm1	100	47.320	ENSSBOG00000020389	R3HDM1	87	57.353	Saimiri_boliviensis_boliviensis
ENSFHEG00000018713	r3hdm1	100	47.288	ENSSHAG00000016999	R3HDM1	89	46.369	Sarcophilus_harrisii
ENSFHEG00000018713	r3hdm1	90	70.517	ENSSFOG00015014134	r3hdm1	88	63.415	Scleropages_formosus
ENSFHEG00000018713	r3hdm1	100	47.290	ENSSFOG00015019851	-	94	52.226	Scleropages_formosus
ENSFHEG00000018713	r3hdm1	100	72.830	ENSSMAG00000001669	r3hdm1	90	72.830	Scophthalmus_maximus
ENSFHEG00000018713	r3hdm1	100	76.371	ENSSDUG00000010749	r3hdm1	100	77.346	Seriola_dumerili
ENSFHEG00000018713	r3hdm1	100	77.916	ENSSLDG00000004499	r3hdm1	90	78.489	Seriola_lalandi_dorsalis
ENSFHEG00000018713	r3hdm1	62	53.746	ENSSARG00000000352	-	52	55.049	Sorex_araneus
ENSFHEG00000018713	r3hdm1	100	46.859	ENSSPUG00000004167	R3HDM1	88	45.438	Sphenodon_punctatus
ENSFHEG00000018713	r3hdm1	100	79.317	ENSSPAG00000004648	r3hdm1	100	79.412	Stegastes_partitus
ENSFHEG00000018713	r3hdm1	91	59.140	ENSSSCG00000015692	R3HDM1	87	54.568	Sus_scrofa
ENSFHEG00000018713	r3hdm1	100	46.605	ENSTGUG00000011750	R3HDM1	89	45.880	Taeniopygia_guttata
ENSFHEG00000018713	r3hdm1	100	70.817	ENSTRUG00000011654	r3hdm1	99	70.722	Takifugu_rubripes
ENSFHEG00000018713	r3hdm1	98	65.184	ENSTNIG00000010362	r3hdm1	99	65.474	Tetraodon_nigroviridis
ENSFHEG00000018713	r3hdm1	99	41.729	ENSTTRG00000003935	R3HDM1	77	47.065	Tursiops_truncatus
ENSFHEG00000018713	r3hdm1	74	62.400	ENSUAMG00000024806	R3HDM1	99	56.631	Ursus_americanus
ENSFHEG00000018713	r3hdm1	91	61.600	ENSUMAG00000005552	R3HDM1	87	56.863	Ursus_maritimus
ENSFHEG00000018713	r3hdm1	91	45.632	ENSVPAG00000007333	R3HDM1	74	46.556	Vicugna_pacos
ENSFHEG00000018713	r3hdm1	100	47.871	ENSVVUG00000006457	R3HDM1	88	56.863	Vulpes_vulpes
ENSFHEG00000018713	r3hdm1	100	42.389	ENSXETG00000019330	r3hdm1	99	42.711	Xenopus_tropicalis
ENSFHEG00000018713	r3hdm1	83	77.637	ENSXCOG00000017448	r3hdm1	93	81.575	Xiphophorus_couchianus
ENSFHEG00000018713	r3hdm1	100	86.307	ENSXMAG00000007885	r3hdm1	100	86.307	Xiphophorus_maculatus