EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000018979 (Gene tree)
Gene ID
105933124
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
6264 bases
Position
chrKN811401.1:850961-857224
Accession
105933124
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000017269PABPPF00658.186.5e-3211
ENSFHEP00000017269RRM_5PF13893.63.8e-0812
ENSFHEP00000017269RRM_5PF13893.63.8e-0822
ENSFHEP00000017269RRM_1PF00076.222.1e-9314
ENSFHEP00000017269RRM_1PF00076.222.1e-9324
ENSFHEP00000017269RRM_1PF00076.222.1e-9334
ENSFHEP00000017269RRM_1PF00076.222.1e-9344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000025914-2921XM_012872516ENSFHEP00000017269635 (aa)XP_012727970UPI0006451EFC
Gene Model
Click here to download ENSFHEG00000018979's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000018979's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000018979pabpc1a5430.178ENSFHEG00000001267trnau1apb5430.178
ENSFHEG00000018979pabpc1a5936.145ENSFHEG00000004530elavl48136.145
ENSFHEG00000018979pabpc1a5730.035ENSFHEG00000007703tial17230.035
ENSFHEG00000018979pabpc1a5933.684ENSFHEG00000023377rbms2b5333.684
ENSFHEG00000018979pabpc1a5439.759ENSFHEG00000012816celf5a6339.759
ENSFHEG00000018979pabpc1a5932.117ENSFHEG00000018000ncl6031.928
ENSFHEG00000018979pabpc1a9876.752ENSFHEG00000007548pabpc49877.070
ENSFHEG00000018979pabpc1a10089.342ENSFHEG00000008186pabpc1b10089.498
ENSFHEG00000018979pabpc1a5636.047ENSFHEG00000010537-5836.047
ENSFHEG00000018979pabpc1a5838.667ENSFHEG00000012578rbm197338.667
ENSFHEG00000018979pabpc1a5732.044ENSFHEG00000002832tia1l7032.044
ENSFHEG00000018979pabpc1a9869.606ENSFHEG00000003398pabpc1l9969.731
ENSFHEG00000018979pabpc1a6031.579ENSFHEG00000010307ELAVL28531.579
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000018979pabpc1a5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSFHEG00000018979pabpc1a5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSFHEG00000018979pabpc1a10097.953ENSAPOG00000015105pabpc1a10097.953Acanthochromis_polyacanthus
ENSFHEG00000018979pabpc1a10090.439ENSAPOG00000017776pabpc1b10090.282Acanthochromis_polyacanthus
ENSFHEG00000018979pabpc1a5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSFHEG00000018979pabpc1a10097.795ENSACIG00000004685pabpc1a10097.795Amphilophus_citrinellus
ENSFHEG00000018979pabpc1a10086.072ENSACIG00000018366pabpc1b10085.915Amphilophus_citrinellus
ENSFHEG00000018979pabpc1a10090.282ENSAOCG00000019839pabpc1b10090.125Amphiprion_ocellaris
ENSFHEG00000018979pabpc1a10098.110ENSAOCG00000011656pabpc1a10098.110Amphiprion_ocellaris
ENSFHEG00000018979pabpc1a10090.282ENSAPEG00000010435pabpc1b10090.125Amphiprion_percula
ENSFHEG00000018979pabpc1a10098.110ENSAPEG00000006963pabpc1a10098.110Amphiprion_percula
ENSFHEG00000018979pabpc1a10097.795ENSATEG00000024852pabpc1a10097.795Anabas_testudineus
ENSFHEG00000018979pabpc1a10089.515ENSATEG00000012917pabpc1b10089.515Anabas_testudineus
ENSFHEG00000018979pabpc1a5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSFHEG00000018979pabpc1a5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSFHEG00000018979pabpc1a10089.028ENSACLG00000014335pabpc1b10088.871Astatotilapia_calliptera
ENSFHEG00000018979pabpc1a10097.795ENSACLG00000009399pabpc1a10097.795Astatotilapia_calliptera
ENSFHEG00000018979pabpc1a10090.282ENSAMXG00000008599pabpc1b10090.125Astyanax_mexicanus
ENSFHEG00000018979pabpc1a5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSFHEG00000018979pabpc1a5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSFHEG00000018979pabpc1a5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSFHEG00000018979pabpc1a5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSFHEG00000018979pabpc1a5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSFHEG00000018979pabpc1a5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSFHEG00000018979pabpc1a5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSFHEG00000018979pabpc1a5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSFHEG00000018979pabpc1a5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSFHEG00000018979pabpc1a5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSFHEG00000018979pabpc1a5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSFHEG00000018979pabpc1a5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSFHEG00000018979pabpc1a5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSFHEG00000018979pabpc1a5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSFHEG00000018979pabpc1a5780.110ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSFHEG00000018979pabpc1a10089.028ENSCSEG00000015241-10089.028Cynoglossus_semilaevis
ENSFHEG00000018979pabpc1a9997.310ENSCSEG00000013324pabpc1a10097.310Cynoglossus_semilaevis
ENSFHEG00000018979pabpc1a10098.110ENSCVAG00000021872pabpc1a10098.110Cyprinodon_variegatus
ENSFHEG00000018979pabpc1a10087.793ENSCVAG00000005489pabpc1b10087.637Cyprinodon_variegatus
ENSFHEG00000018979pabpc1a10089.655ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSFHEG00000018979pabpc1a10091.693ENSDARG00000017219pabpc1a10091.693Danio_rerio
ENSFHEG00000018979pabpc1a5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSFHEG00000018979pabpc1a5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSFHEG00000018979pabpc1a5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSFHEG00000018979pabpc1a5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSFHEG00000018979pabpc1a5976.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSFHEG00000018979pabpc1a10088.594ENSELUG00000015062-10088.438Esox_lucius
ENSFHEG00000018979pabpc1a5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSFHEG00000018979pabpc1a9993.711ENSELUG00000003614pabpc1a10093.711Esox_lucius
ENSFHEG00000018979pabpc1a5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSFHEG00000018979pabpc1a5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSFHEG00000018979pabpc1a10081.085ENSGMOG00000002448-10080.620Gadus_morhua
ENSFHEG00000018979pabpc1a9993.818ENSGMOG00000013448pabpc1a9993.663Gadus_morhua
ENSFHEG00000018979pabpc1a10097.953ENSGAFG00000019750pabpc1a10097.953Gambusia_affinis
ENSFHEG00000018979pabpc1a10089.969ENSGAFG00000010193pabpc1b10090.125Gambusia_affinis
ENSFHEG00000018979pabpc1a10097.795ENSGACG00000003572pabpc1a10097.795Gasterosteus_aculeatus
ENSFHEG00000018979pabpc1a10087.907ENSGACG00000003771pabpc1b10087.907Gasterosteus_aculeatus
ENSFHEG00000018979pabpc1a5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSFHEG00000018979pabpc1a5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSFHEG00000018979pabpc1a10097.795ENSHBUG00000020487pabpc1a10097.795Haplochromis_burtoni
ENSFHEG00000018979pabpc1a10089.028ENSHBUG00000002075pabpc1b10088.871Haplochromis_burtoni
ENSFHEG00000018979pabpc1a5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSFHEG00000018979pabpc1a5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSFHEG00000018979pabpc1a5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSFHEG00000018979pabpc1a9869.600ENSHCOG00000003175pabpc1b9981.720Hippocampus_comes
ENSFHEG00000018979pabpc1a10097.480ENSHCOG00000013502pabpc1a10097.480Hippocampus_comes
ENSFHEG00000018979pabpc1a10090.551ENSIPUG00000008848pabpc1a10090.551Ictalurus_punctatus
ENSFHEG00000018979pabpc1a10084.615ENSIPUG00000010791-10084.772Ictalurus_punctatus
ENSFHEG00000018979pabpc1a8158.209ENSIPUG00000018724-7658.209Ictalurus_punctatus
ENSFHEG00000018979pabpc1a7555.925ENSIPUG00000021244-6555.925Ictalurus_punctatus
ENSFHEG00000018979pabpc1a5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSFHEG00000018979pabpc1a5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSFHEG00000018979pabpc1a5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSFHEG00000018979pabpc1a10088.365ENSKMAG00000008049pabpc1b10088.522Kryptolebias_marmoratus
ENSFHEG00000018979pabpc1a10098.110ENSKMAG00000000605pabpc1a10098.110Kryptolebias_marmoratus
ENSFHEG00000018979pabpc1a10096.693ENSLBEG00000024002-10096.693Labrus_bergylta
ENSFHEG00000018979pabpc1a10089.028ENSLBEG00000026845pabpc1b10088.871Labrus_bergylta
ENSFHEG00000018979pabpc1a5878.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSFHEG00000018979pabpc1a5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSFHEG00000018979pabpc1a5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSFHEG00000018979pabpc1a5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSFHEG00000018979pabpc1a5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSFHEG00000018979pabpc1a5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSFHEG00000018979pabpc1a5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSFHEG00000018979pabpc1a10097.795ENSMAMG00000004502-10097.795Mastacembelus_armatus
ENSFHEG00000018979pabpc1a10089.342ENSMAMG00000014610pabpc1b10089.498Mastacembelus_armatus
ENSFHEG00000018979pabpc1a10089.028ENSMZEG00005026745pabpc1b10088.871Maylandia_zebra
ENSFHEG00000018979pabpc1a10097.795ENSMZEG00005025416pabpc1a10097.795Maylandia_zebra
ENSFHEG00000018979pabpc1a5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSFHEG00000018979pabpc1a10095.000ENSMMOG00000018044pabpc1a10095.000Mola_mola
ENSFHEG00000018979pabpc1a10084.144ENSMMOG00000018009pabpc1b10083.830Mola_mola
ENSFHEG00000018979pabpc1a9872.496ENSMODG00000013156-9872.524Monodelphis_domestica
ENSFHEG00000018979pabpc1a9965.884ENSMODG00000015024-9965.517Monodelphis_domestica
ENSFHEG00000018979pabpc1a10083.987ENSMALG00000006066pabpc1b10085.714Monopterus_albus
ENSFHEG00000018979pabpc1a10097.638ENSMALG00000013020-10097.638Monopterus_albus
ENSFHEG00000018979pabpc1a5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSFHEG00000018979pabpc1a10097.638ENSNBRG00000003068-10097.638Neolamprologus_brichardi
ENSFHEG00000018979pabpc1a10089.028ENSNBRG00000013737pabpc1b10088.871Neolamprologus_brichardi
ENSFHEG00000018979pabpc1a5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSFHEG00000018979pabpc1a5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSFHEG00000018979pabpc1a10089.028ENSONIG00000002717pabpc1b10088.871Oreochromis_niloticus
ENSFHEG00000018979pabpc1a10097.008ENSONIG00000006871-10097.008Oreochromis_niloticus
ENSFHEG00000018979pabpc1a5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSFHEG00000018979pabpc1a9998.571ENSORLG00000002691pabpc1a10096.693Oryzias_latipes
ENSFHEG00000018979pabpc1a10084.772ENSORLG00000003008-10084.458Oryzias_latipes
ENSFHEG00000018979pabpc1a10096.850ENSORLG00020022398pabpc1a10096.850Oryzias_latipes_hni
ENSFHEG00000018979pabpc1a10084.772ENSORLG00020022259-10084.458Oryzias_latipes_hni
ENSFHEG00000018979pabpc1a10096.693ENSORLG00015013633pabpc110096.693Oryzias_latipes_hsok
ENSFHEG00000018979pabpc1a10084.929ENSORLG00015010932-10084.615Oryzias_latipes_hsok
ENSFHEG00000018979pabpc1a10097.638ENSOMEG00000020219pabpc1a10097.638Oryzias_melastigma
ENSFHEG00000018979pabpc1a9981.922ENSOMEG00000013627pabpc1b10081.922Oryzias_melastigma
ENSFHEG00000018979pabpc1a5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSFHEG00000018979pabpc1a5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSFHEG00000018979pabpc1a5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSFHEG00000018979pabpc1a5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSFHEG00000018979pabpc1a5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSFHEG00000018979pabpc1a5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSFHEG00000018979pabpc1a5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSFHEG00000018979pabpc1a5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSFHEG00000018979pabpc1a10089.969ENSPKIG00000005676pabpc1b10089.969Paramormyrops_kingsleyae
ENSFHEG00000018979pabpc1a7098.202ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSFHEG00000018979pabpc1a7092.377ENSPMGG00000023134-9792.377Periophthalmus_magnuspinnatus
ENSFHEG00000018979pabpc1a9971.791ENSPCIG00000016995-5571.746Phascolarctos_cinereus
ENSFHEG00000018979pabpc1a10096.754ENSPFOG00000010815pabpc1a10096.754Poecilia_formosa
ENSFHEG00000018979pabpc1a10089.498ENSPFOG00000005917pabpc1b10089.655Poecilia_formosa
ENSFHEG00000018979pabpc1a10098.740ENSPLAG00000004114pabpc1a10098.740Poecilia_latipinna
ENSFHEG00000018979pabpc1a10089.812ENSPLAG00000001388pabpc1b10089.969Poecilia_latipinna
ENSFHEG00000018979pabpc1a10089.498ENSPMEG00000014399pabpc1b10089.655Poecilia_mexicana
ENSFHEG00000018979pabpc1a10098.740ENSPMEG00000001334pabpc1a10098.740Poecilia_mexicana
ENSFHEG00000018979pabpc1a10095.476ENSPREG00000019595pabpc1a10096.296Poecilia_reticulata
ENSFHEG00000018979pabpc1a10089.812ENSPREG00000010911pabpc1b10089.969Poecilia_reticulata
ENSFHEG00000018979pabpc1a5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSFHEG00000018979pabpc1a5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSFHEG00000018979pabpc1a5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSFHEG00000018979pabpc1a5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSFHEG00000018979pabpc1a10089.028ENSPNYG00000012578pabpc1b10088.871Pundamilia_nyererei
ENSFHEG00000018979pabpc1a10097.795ENSPNYG00000005192pabpc1a10097.795Pundamilia_nyererei
ENSFHEG00000018979pabpc1a10091.209ENSPNAG00000028408pabpc1a10090.895Pygocentrus_nattereri
ENSFHEG00000018979pabpc1a10089.655ENSPNAG00000024626pabpc1b10089.498Pygocentrus_nattereri
ENSFHEG00000018979pabpc1a9989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSFHEG00000018979pabpc1a5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSFHEG00000018979pabpc1a5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSFHEG00000018979pabpc1a9863.782ENSSHAG00000000511-10063.462Sarcophilus_harrisii
ENSFHEG00000018979pabpc1a10089.796ENSSFOG00015006662pabpc1a10089.796Scleropages_formosus
ENSFHEG00000018979pabpc1a6978.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSFHEG00000018979pabpc1a10090.110ENSSFOG00015002752-10089.953Scleropages_formosus
ENSFHEG00000018979pabpc1a10088.558ENSSMAG00000006869pabpc1b10088.401Scophthalmus_maximus
ENSFHEG00000018979pabpc1a10097.323ENSSMAG00000010803pabpc1a10097.323Scophthalmus_maximus
ENSFHEG00000018979pabpc1a10088.088ENSSDUG00000011965pabpc1b10087.931Seriola_dumerili
ENSFHEG00000018979pabpc1a10097.480ENSSDUG00000006675pabpc1a10097.480Seriola_dumerili
ENSFHEG00000018979pabpc1a10097.480ENSSLDG00000011661pabpc1a10097.480Seriola_lalandi_dorsalis
ENSFHEG00000018979pabpc1a10089.736ENSSLDG00000014156pabpc1b10089.580Seriola_lalandi_dorsalis
ENSFHEG00000018979pabpc1a10098.110ENSSPAG00000014453-10098.110Stegastes_partitus
ENSFHEG00000018979pabpc1a10090.282ENSSPAG00000019265pabpc1b10090.125Stegastes_partitus
ENSFHEG00000018979pabpc1a5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSFHEG00000018979pabpc1a5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSFHEG00000018979pabpc1a10094.654ENSTRUG00000011577-10095.126Takifugu_rubripes
ENSFHEG00000018979pabpc1a10086.072ENSTRUG00000003767-10086.072Takifugu_rubripes
ENSFHEG00000018979pabpc1a10091.783ENSTNIG00000013307pabpc1a10092.248Tetraodon_nigroviridis
ENSFHEG00000018979pabpc1a10086.604ENSTNIG00000009153pabpc1b10085.981Tetraodon_nigroviridis
ENSFHEG00000018979pabpc1a5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSFHEG00000018979pabpc1a5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSFHEG00000018979pabpc1a9754.045ENSUMAG00000023926-8969.890Ursus_maritimus
ENSFHEG00000018979pabpc1a5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSFHEG00000018979pabpc1a5879.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSFHEG00000018979pabpc1a9744.988ENSXETG00000015439-9744.931Xenopus_tropicalis
ENSFHEG00000018979pabpc1a10086.050ENSXCOG00000019901pabpc1b10086.364Xiphophorus_couchianus
ENSFHEG00000018979pabpc1a10092.126ENSXCOG00000017066pabpc1a10092.126Xiphophorus_couchianus
ENSFHEG00000018979pabpc1a10098.268ENSXMAG00000002555pabpc1a10098.268Xiphophorus_maculatus
ENSFHEG00000018979pabpc1a10089.969ENSXMAG00000003753pabpc1b10090.125Xiphophorus_maculatus

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