EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000019294 (Gene tree)
Gene ID: 105934334
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15453 bases
Position: chrKN805603.1:956494-971946
Accession: 105934334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000017547	PolyA_pol	PF01743.20	3.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026249	-	2692	XM_012874276	ENSFHEP00000017547	425 (aa)	XP_012729730	UPI0006448256

Gene Model

Click here to download ENSFHEG00000019294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019294	trnt1	99	68.085	ENSG00000072756	TRNT1	96	68.085	Homo_sapiens
ENSFHEG00000019294	trnt1	100	83.372	ENSAPOG00000013687	trnt1	100	83.372	Acanthochromis_polyacanthus
ENSFHEG00000019294	trnt1	99	66.824	ENSAMEG00000014520	TRNT1	96	66.824	Ailuropoda_melanoleuca
ENSFHEG00000019294	trnt1	100	85.681	ENSACIG00000021706	trnt1	100	85.681	Amphilophus_citrinellus
ENSFHEG00000019294	trnt1	100	86.183	ENSAOCG00000024612	trnt1	100	86.183	Amphiprion_ocellaris
ENSFHEG00000019294	trnt1	96	79.075	ENSAPEG00000022627	trnt1	95	79.075	Amphiprion_percula
ENSFHEG00000019294	trnt1	95	86.849	ENSATEG00000008928	trnt1	99	86.849	Anabas_testudineus
ENSFHEG00000019294	trnt1	95	66.749	ENSAPLG00000004258	TRNT1	99	66.749	Anas_platyrhynchos
ENSFHEG00000019294	trnt1	96	66.259	ENSACAG00000005657	TRNT1	93	66.259	Anolis_carolinensis
ENSFHEG00000019294	trnt1	99	67.376	ENSANAG00000024802	TRNT1	96	67.376	Aotus_nancymaae
ENSFHEG00000019294	trnt1	99	84.742	ENSACLG00000022227	trnt1	99	84.742	Astatotilapia_calliptera
ENSFHEG00000019294	trnt1	99	76.636	ENSAMXG00000003960	trnt1	99	76.636	Astyanax_mexicanus
ENSFHEG00000019294	trnt1	99	65.485	ENSBTAG00000019534	TRNT1	96	65.485	Bos_taurus
ENSFHEG00000019294	trnt1	95	43.447	WBGene00010089	hpo-31	94	43.447	Caenorhabditis_elegans
ENSFHEG00000019294	trnt1	99	67.612	ENSCJAG00000015466	TRNT1	96	67.612	Callithrix_jacchus
ENSFHEG00000019294	trnt1	96	69.212	ENSCAFG00000005985	TRNT1	93	69.212	Canis_familiaris
ENSFHEG00000019294	trnt1	96	69.212	ENSCAFG00020014746	TRNT1	93	69.212	Canis_lupus_dingo
ENSFHEG00000019294	trnt1	99	66.430	ENSCHIG00000007030	TRNT1	95	66.430	Capra_hircus
ENSFHEG00000019294	trnt1	99	68.558	ENSTSYG00000013390	TRNT1	96	68.558	Carlito_syrichta
ENSFHEG00000019294	trnt1	89	54.111	ENSCAPG00000006891	TRNT1	99	54.111	Cavia_aperea
ENSFHEG00000019294	trnt1	99	66.667	ENSCPOG00000007849	TRNT1	96	66.667	Cavia_porcellus
ENSFHEG00000019294	trnt1	96	68.049	ENSCCAG00000002919	TRNT1	99	68.049	Cebus_capucinus
ENSFHEG00000019294	trnt1	96	70.197	ENSCATG00000031985	TRNT1	92	70.197	Cercocebus_atys
ENSFHEG00000019294	trnt1	96	68.873	ENSCLAG00000005186	TRNT1	84	81.006	Chinchilla_lanigera
ENSFHEG00000019294	trnt1	96	70.197	ENSCSAG00000011052	TRNT1	94	70.197	Chlorocebus_sabaeus
ENSFHEG00000019294	trnt1	84	75.648	ENSCHOG00000005712	TRNT1	81	75.648	Choloepus_hoffmanni
ENSFHEG00000019294	trnt1	96	68.873	ENSCPBG00000017636	TRNT1	93	68.873	Chrysemys_picta_bellii
ENSFHEG00000019294	trnt1	95	40.000	ENSCING00000007069	-	99	40.000	Ciona_intestinalis
ENSFHEG00000019294	trnt1	95	41.565	ENSCSAVG00000007494	-	95	41.565	Ciona_savignyi
ENSFHEG00000019294	trnt1	96	70.443	ENSCANG00000039030	TRNT1	94	70.443	Colobus_angolensis_palliatus
ENSFHEG00000019294	trnt1	99	67.849	ENSCGRG00001009998	Trnt1	96	67.849	Cricetulus_griseus_chok1gshd
ENSFHEG00000019294	trnt1	99	67.849	ENSCGRG00000013410	Trnt1	90	76.650	Cricetulus_griseus_crigri
ENSFHEG00000019294	trnt1	99	80.941	ENSCSEG00000008157	trnt1	99	80.941	Cynoglossus_semilaevis
ENSFHEG00000019294	trnt1	100	89.647	ENSCVAG00000019770	trnt1	100	89.647	Cyprinodon_variegatus
ENSFHEG00000019294	trnt1	99	77.700	ENSDARG00000075297	trnt1	99	77.700	Danio_rerio
ENSFHEG00000019294	trnt1	99	68.794	ENSDNOG00000008837	TRNT1	96	68.794	Dasypus_novemcinctus
ENSFHEG00000019294	trnt1	96	69.118	ENSDORG00000014035	Trnt1	94	69.118	Dipodomys_ordii
ENSFHEG00000019294	trnt1	94	48.522	FBgn0037369	CG2100	83	48.522	Drosophila_melanogaster
ENSFHEG00000019294	trnt1	57	75.519	ENSETEG00000018177	TRNT1	97	75.519	Echinops_telfairi
ENSFHEG00000019294	trnt1	99	61.412	ENSEBUG00000012779	-	99	61.412	Eptatretus_burgeri
ENSFHEG00000019294	trnt1	96	70.197	ENSEASG00005003577	TRNT1	94	70.197	Equus_asinus_asinus
ENSFHEG00000019294	trnt1	96	70.443	ENSECAG00000014420	TRNT1	94	70.443	Equus_caballus
ENSFHEG00000019294	trnt1	99	68.558	ENSEEUG00000009567	TRNT1	97	68.558	Erinaceus_europaeus
ENSFHEG00000019294	trnt1	99	79.391	ENSELUG00000003802	trnt1	99	79.391	Esox_lucius
ENSFHEG00000019294	trnt1	99	67.376	ENSFCAG00000026805	TRNT1	95	67.376	Felis_catus
ENSFHEG00000019294	trnt1	90	68.668	ENSFALG00000013539	TRNT1	99	68.668	Ficedula_albicollis
ENSFHEG00000019294	trnt1	99	66.667	ENSFDAG00000018412	TRNT1	87	75.773	Fukomys_damarensis
ENSFHEG00000019294	trnt1	99	78.638	ENSGMOG00000007460	trnt1	100	78.638	Gadus_morhua
ENSFHEG00000019294	trnt1	96	66.422	ENSGALG00000017368	TRNT1	94	66.422	Gallus_gallus
ENSFHEG00000019294	trnt1	99	88.443	ENSGAFG00000008647	trnt1	99	88.443	Gambusia_affinis
ENSFHEG00000019294	trnt1	99	84.038	ENSGACG00000011903	trnt1	99	84.038	Gasterosteus_aculeatus
ENSFHEG00000019294	trnt1	96	69.853	ENSGAGG00000020942	TRNT1	93	69.853	Gopherus_agassizii
ENSFHEG00000019294	trnt1	99	68.085	ENSGGOG00000015286	TRNT1	96	68.085	Gorilla_gorilla
ENSFHEG00000019294	trnt1	99	84.977	ENSHBUG00000002797	trnt1	99	84.977	Haplochromis_burtoni
ENSFHEG00000019294	trnt1	99	62.736	ENSHGLG00000000221	-	96	62.736	Heterocephalus_glaber_female
ENSFHEG00000019294	trnt1	99	67.139	ENSHGLG00000003649	TRNT1	96	67.139	Heterocephalus_glaber_female
ENSFHEG00000019294	trnt1	99	65.957	ENSHGLG00100016421	TRNT1	96	65.957	Heterocephalus_glaber_male
ENSFHEG00000019294	trnt1	100	77.283	ENSHCOG00000010618	trnt1	100	77.283	Hippocampus_comes
ENSFHEG00000019294	trnt1	99	76.636	ENSIPUG00000000971	trnt1	99	76.636	Ictalurus_punctatus
ENSFHEG00000019294	trnt1	99	69.267	ENSSTOG00000000150	TRNT1	90	77.320	Ictidomys_tridecemlineatus
ENSFHEG00000019294	trnt1	96	68.873	ENSJJAG00000018561	Trnt1	94	68.873	Jaculus_jaculus
ENSFHEG00000019294	trnt1	99	85.647	ENSKMAG00000011307	trnt1	99	85.647	Kryptolebias_marmoratus
ENSFHEG00000019294	trnt1	96	78.102	ENSLBEG00000019457	trnt1	97	78.102	Labrus_bergylta
ENSFHEG00000019294	trnt1	98	70.361	ENSLACG00000013227	TRNT1	96	70.361	Latimeria_chalumnae
ENSFHEG00000019294	trnt1	99	72.028	ENSLOCG00000011105	trnt1	98	72.028	Lepisosteus_oculatus
ENSFHEG00000019294	trnt1	99	67.612	ENSLAFG00000023191	TRNT1	96	67.612	Loxodonta_africana
ENSFHEG00000019294	trnt1	96	70.197	ENSMFAG00000045113	TRNT1	92	70.197	Macaca_fascicularis
ENSFHEG00000019294	trnt1	96	70.197	ENSMMUG00000017983	TRNT1	92	70.197	Macaca_mulatta
ENSFHEG00000019294	trnt1	96	70.197	ENSMNEG00000037805	TRNT1	92	70.197	Macaca_nemestrina
ENSFHEG00000019294	trnt1	90	70.419	ENSMLEG00000033671	TRNT1	99	70.419	Mandrillus_leucophaeus
ENSFHEG00000019294	trnt1	100	84.778	ENSMAMG00000023401	trnt1	100	84.778	Mastacembelus_armatus
ENSFHEG00000019294	trnt1	99	84.742	ENSMZEG00005009141	trnt1	99	84.742	Maylandia_zebra
ENSFHEG00000019294	trnt1	75	66.458	ENSMGAG00000009971	TRNT1	99	66.458	Meleagris_gallopavo
ENSFHEG00000019294	trnt1	99	67.612	ENSMAUG00000020707	Trnt1	96	67.612	Mesocricetus_auratus
ENSFHEG00000019294	trnt1	99	68.322	ENSMICG00000016615	TRNT1	96	68.322	Microcebus_murinus
ENSFHEG00000019294	trnt1	99	67.849	ENSMOCG00000004539	Trnt1	96	67.849	Microtus_ochrogaster
ENSFHEG00000019294	trnt1	99	81.368	ENSMMOG00000010742	trnt1	99	81.368	Mola_mola
ENSFHEG00000019294	trnt1	99	65.485	ENSMODG00000004368	TRNT1	96	65.485	Monodelphis_domestica
ENSFHEG00000019294	trnt1	100	82.670	ENSMALG00000008376	trnt1	99	82.670	Monopterus_albus
ENSFHEG00000019294	trnt1	99	67.612	MGP_CAROLIEiJ_G0028698	Trnt1	93	73.745	Mus_caroli
ENSFHEG00000019294	trnt1	99	67.376	ENSMUSG00000013736	Trnt1	87	77.835	Mus_musculus
ENSFHEG00000019294	trnt1	99	68.558	MGP_PahariEiJ_G0022449	Trnt1	92	78.351	Mus_pahari
ENSFHEG00000019294	trnt1	99	67.612	MGP_SPRETEiJ_G0029726	Trnt1	87	77.835	Mus_spretus
ENSFHEG00000019294	trnt1	99	67.612	ENSMPUG00000017017	TRNT1	95	67.612	Mustela_putorius_furo
ENSFHEG00000019294	trnt1	90	69.792	ENSMLUG00000011864	TRNT1	99	69.792	Myotis_lucifugus
ENSFHEG00000019294	trnt1	99	67.139	ENSNGAG00000000537	Trnt1	96	67.139	Nannospalax_galili
ENSFHEG00000019294	trnt1	81	84.682	ENSNBRG00000023606	trnt1	99	84.682	Neolamprologus_brichardi
ENSFHEG00000019294	trnt1	99	68.322	ENSNLEG00000003226	TRNT1	96	68.322	Nomascus_leucogenys
ENSFHEG00000019294	trnt1	99	65.248	ENSMEUG00000004684	TRNT1	96	65.248	Notamacropus_eugenii
ENSFHEG00000019294	trnt1	90	65.969	ENSOPRG00000015067	TRNT1	99	65.969	Ochotona_princeps
ENSFHEG00000019294	trnt1	99	66.667	ENSODEG00000007597	TRNT1	96	66.667	Octodon_degus
ENSFHEG00000019294	trnt1	100	85.714	ENSONIG00000020273	trnt1	99	85.714	Oreochromis_niloticus
ENSFHEG00000019294	trnt1	96	64.373	ENSOANG00000007514	TRNT1	94	64.373	Ornithorhynchus_anatinus
ENSFHEG00000019294	trnt1	98	68.182	ENSOCUG00000008580	TRNT1	97	68.182	Oryctolagus_cuniculus
ENSFHEG00000019294	trnt1	96	84.069	ENSORLG00000003165	trnt1	96	84.069	Oryzias_latipes
ENSFHEG00000019294	trnt1	96	84.314	ENSORLG00020022060	trnt1	96	84.314	Oryzias_latipes_hni
ENSFHEG00000019294	trnt1	96	84.069	ENSORLG00015018915	trnt1	96	84.069	Oryzias_latipes_hsok
ENSFHEG00000019294	trnt1	99	79.481	ENSOMEG00000003331	trnt1	99	79.481	Oryzias_melastigma
ENSFHEG00000019294	trnt1	99	66.430	ENSOARG00000008631	TRNT1	95	66.430	Ovis_aries
ENSFHEG00000019294	trnt1	99	67.849	ENSPPAG00000043566	TRNT1	96	67.849	Pan_paniscus
ENSFHEG00000019294	trnt1	99	67.139	ENSPPRG00000001327	TRNT1	95	67.139	Panthera_pardus
ENSFHEG00000019294	trnt1	99	67.139	ENSPTIG00000011448	TRNT1	95	67.139	Panthera_tigris_altaica
ENSFHEG00000019294	trnt1	99	67.849	ENSPTRG00000014564	TRNT1	96	67.849	Pan_troglodytes
ENSFHEG00000019294	trnt1	96	70.197	ENSPANG00000025944	TRNT1	92	70.197	Papio_anubis
ENSFHEG00000019294	trnt1	99	74.299	ENSPKIG00000020015	trnt1	99	74.299	Paramormyrops_kingsleyae
ENSFHEG00000019294	trnt1	93	69.367	ENSPSIG00000017356	TRNT1	99	70.474	Pelodiscus_sinensis
ENSFHEG00000019294	trnt1	99	79.343	ENSPMGG00000008888	trnt1	98	79.343	Periophthalmus_magnuspinnatus
ENSFHEG00000019294	trnt1	99	68.085	ENSPEMG00000019845	Trnt1	96	68.085	Peromyscus_maniculatus_bairdii
ENSFHEG00000019294	trnt1	96	67.647	ENSPCIG00000030436	TRNT1	94	67.647	Phascolarctos_cinereus
ENSFHEG00000019294	trnt1	99	88.599	ENSPFOG00000006194	trnt1	99	88.599	Poecilia_formosa
ENSFHEG00000019294	trnt1	99	88.361	ENSPLAG00000015623	trnt1	99	89.082	Poecilia_latipinna
ENSFHEG00000019294	trnt1	99	88.443	ENSPMEG00000012216	trnt1	99	88.834	Poecilia_mexicana
ENSFHEG00000019294	trnt1	99	88.208	ENSPREG00000021470	trnt1	99	88.208	Poecilia_reticulata
ENSFHEG00000019294	trnt1	99	67.849	ENSPPYG00000013702	TRNT1	96	67.849	Pongo_abelii
ENSFHEG00000019294	trnt1	90	70.419	ENSPCAG00000001951	TRNT1	99	70.419	Procavia_capensis
ENSFHEG00000019294	trnt1	99	67.849	ENSPCOG00000022228	TRNT1	96	67.849	Propithecus_coquereli
ENSFHEG00000019294	trnt1	90	68.848	ENSPVAG00000008784	TRNT1	99	68.848	Pteropus_vampyrus
ENSFHEG00000019294	trnt1	99	84.507	ENSPNYG00000003120	trnt1	99	84.507	Pundamilia_nyererei
ENSFHEG00000019294	trnt1	99	77.103	ENSPNAG00000000565	trnt1	99	77.103	Pygocentrus_nattereri
ENSFHEG00000019294	trnt1	99	68.558	ENSRNOG00000006432	Trnt1	96	68.558	Rattus_norvegicus
ENSFHEG00000019294	trnt1	96	69.458	ENSRBIG00000042632	TRNT1	93	69.458	Rhinopithecus_bieti
ENSFHEG00000019294	trnt1	96	70.197	ENSRROG00000036866	TRNT1	94	70.197	Rhinopithecus_roxellana
ENSFHEG00000019294	trnt1	99	67.612	ENSSBOG00000021208	TRNT1	96	67.612	Saimiri_boliviensis_boliviensis
ENSFHEG00000019294	trnt1	96	66.995	ENSSHAG00000018861	TRNT1	94	66.995	Sarcophilus_harrisii
ENSFHEG00000019294	trnt1	99	72.960	ENSSFOG00015020844	trnt1	99	72.960	Scleropages_formosus
ENSFHEG00000019294	trnt1	100	85.246	ENSSMAG00000015432	trnt1	98	85.246	Scophthalmus_maximus
ENSFHEG00000019294	trnt1	99	85.681	ENSSDUG00000012320	trnt1	100	85.681	Seriola_dumerili
ENSFHEG00000019294	trnt1	99	85.446	ENSSLDG00000009325	trnt1	100	85.446	Seriola_lalandi_dorsalis
ENSFHEG00000019294	trnt1	57	82.988	ENSSLDG00000016463	-	91	83.264	Seriola_lalandi_dorsalis
ENSFHEG00000019294	trnt1	90	70.419	ENSSPUG00000014153	TRNT1	99	70.419	Sphenodon_punctatus
ENSFHEG00000019294	trnt1	100	84.543	ENSSPAG00000021005	trnt1	100	84.543	Stegastes_partitus
ENSFHEG00000019294	trnt1	99	67.376	ENSSSCG00000011529	TRNT1	96	67.376	Sus_scrofa
ENSFHEG00000019294	trnt1	95	67.574	ENSTGUG00000010192	TRNT1	99	67.574	Taeniopygia_guttata
ENSFHEG00000019294	trnt1	99	81.455	ENSTRUG00000001088	trnt1	99	81.455	Takifugu_rubripes
ENSFHEG00000019294	trnt1	99	80.986	ENSTNIG00000007363	trnt1	98	80.986	Tetraodon_nigroviridis
ENSFHEG00000019294	trnt1	57	63.900	ENSTBEG00000006367	TRNT1	80	63.900	Tupaia_belangeri
ENSFHEG00000019294	trnt1	99	66.194	ENSTTRG00000007803	TRNT1	96	66.194	Tursiops_truncatus
ENSFHEG00000019294	trnt1	96	68.966	ENSUAMG00000022574	TRNT1	93	68.966	Ursus_americanus
ENSFHEG00000019294	trnt1	96	68.966	ENSUMAG00000024092	TRNT1	93	68.966	Ursus_maritimus
ENSFHEG00000019294	trnt1	96	69.212	ENSVVUG00000012810	TRNT1	93	69.212	Vulpes_vulpes
ENSFHEG00000019294	trnt1	96	61.125	ENSXETG00000025091	trnt1	99	61.443	Xenopus_tropicalis
ENSFHEG00000019294	trnt1	99	87.972	ENSXCOG00000010150	trnt1	99	87.972	Xiphophorus_couchianus
ENSFHEG00000019294	trnt1	99	88.443	ENSXMAG00000002227	trnt1	99	88.443	Xiphophorus_maculatus