EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000019426 (Gene tree)
Gene ID: 105939922
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 6358 bases
Position: chrKN811590.1:721252-727609
Accession: 105939922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000017658	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026392	-	3408	XM_012882291	ENSFHEP00000017658	267 (aa)	XP_012737745	UPI000645167A

Gene Model

Click here to download ENSFHEG00000019426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000019426	alyref	100	48.699	ENSFHEG00000004698	-	100	47.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019426	alyref	100	54.613	ENSAPOG00000000183	-	100	54.613	Acanthochromis_polyacanthus
ENSFHEG00000019426	alyref	99	77.491	ENSACIG00000006351	alyref	98	80.220	Amphilophus_citrinellus
ENSFHEG00000019426	alyref	100	48.822	ENSACIG00000020351	-	100	53.147	Amphilophus_citrinellus
ENSFHEG00000019426	alyref	100	81.685	ENSAOCG00000014012	alyref	100	83.883	Amphiprion_ocellaris
ENSFHEG00000019426	alyref	100	50.896	ENSAOCG00000019305	-	100	52.768	Amphiprion_ocellaris
ENSFHEG00000019426	alyref	100	54.244	ENSAPEG00000013527	-	100	52.768	Amphiprion_percula
ENSFHEG00000019426	alyref	100	81.685	ENSAPEG00000014603	alyref	100	83.883	Amphiprion_percula
ENSFHEG00000019426	alyref	100	79.137	ENSATEG00000004307	alyref	100	79.496	Anabas_testudineus
ENSFHEG00000019426	alyref	100	57.143	ENSATEG00000000382	-	100	56.044	Anabas_testudineus
ENSFHEG00000019426	alyref	100	55.755	ENSACLG00000010184	-	100	53.957	Astatotilapia_calliptera
ENSFHEG00000019426	alyref	100	81.752	ENSACLG00000008432	alyref	100	82.847	Astatotilapia_calliptera
ENSFHEG00000019426	alyref	100	72.143	ENSAMXG00000007359	alyref	100	75.357	Astyanax_mexicanus
ENSFHEG00000019426	alyref	99	49.818	ENSCING00000013568	-	99	47.482	Ciona_intestinalis
ENSFHEG00000019426	alyref	99	46.691	ENSCSAVG00000003324	-	99	45.149	Ciona_savignyi
ENSFHEG00000019426	alyref	100	77.737	ENSCSEG00000017800	alyref	100	78.467	Cynoglossus_semilaevis
ENSFHEG00000019426	alyref	100	85.926	ENSCVAG00000014869	alyref	100	83.333	Cyprinodon_variegatus
ENSFHEG00000019426	alyref	100	48.014	ENSCVAG00000007789	-	100	47.955	Cyprinodon_variegatus
ENSFHEG00000019426	alyref	100	78.648	ENSDARG00000077732	alyref	100	76.786	Danio_rerio
ENSFHEG00000019426	alyref	97	45.000	FBgn0010774	Ref1	98	41.264	Drosophila_melanogaster
ENSFHEG00000019426	alyref	99	52.273	ENSEBUG00000008253	alyref	95	50.379	Eptatretus_burgeri
ENSFHEG00000019426	alyref	71	47.938	ENSEBUG00000006305	alyref	100	39.502	Eptatretus_burgeri
ENSFHEG00000019426	alyref	100	66.202	ENSELUG00000008849	-	100	66.071	Esox_lucius
ENSFHEG00000019426	alyref	100	78.309	ENSELUG00000017178	alyref	100	76.103	Esox_lucius
ENSFHEG00000019426	alyref	58	78.750	ENSFALG00000011923	-	96	75.974	Ficedula_albicollis
ENSFHEG00000019426	alyref	100	72.325	ENSGMOG00000009882	alyref	100	70.111	Gadus_morhua
ENSFHEG00000019426	alyref	68	61.026	ENSGMOG00000013122	-	100	59.896	Gadus_morhua
ENSFHEG00000019426	alyref	100	48.175	ENSGAFG00000007573	-	100	45.756	Gambusia_affinis
ENSFHEG00000019426	alyref	100	81.481	ENSGAFG00000006014	alyref	100	84.444	Gambusia_affinis
ENSFHEG00000019426	alyref	100	56.429	ENSHBUG00000001454	-	100	56.228	Haplochromis_burtoni
ENSFHEG00000019426	alyref	100	81.752	ENSHBUG00000020196	alyref	100	82.847	Haplochromis_burtoni
ENSFHEG00000019426	alyref	98	47.857	ENSHCOG00000012825	-	94	47.955	Hippocampus_comes
ENSFHEG00000019426	alyref	100	74.182	ENSIPUG00000009469	alyref	100	75.636	Ictalurus_punctatus
ENSFHEG00000019426	alyref	73	65.990	ENSSTOG00000016570	-	92	63.978	Ictidomys_tridecemlineatus
ENSFHEG00000019426	alyref	100	54.074	ENSKMAG00000006462	-	100	52.222	Kryptolebias_marmoratus
ENSFHEG00000019426	alyref	100	83.516	ENSKMAG00000008912	alyref	100	83.150	Kryptolebias_marmoratus
ENSFHEG00000019426	alyref	100	45.270	ENSLBEG00000005387	-	66	54.271	Labrus_bergylta
ENSFHEG00000019426	alyref	100	84.000	ENSLBEG00000023118	alyref	90	84.727	Labrus_bergylta
ENSFHEG00000019426	alyref	99	45.000	ENSLBEG00000012930	-	99	49.084	Labrus_bergylta
ENSFHEG00000019426	alyref	77	72.222	ENSLOCG00000013879	alyref	89	71.963	Lepisosteus_oculatus
ENSFHEG00000019426	alyref	100	87.226	ENSMAMG00000003034	alyref	100	84.307	Mastacembelus_armatus
ENSFHEG00000019426	alyref	100	50.183	ENSMAMG00000005464	-	100	48.708	Mastacembelus_armatus
ENSFHEG00000019426	alyref	100	55.396	ENSMZEG00005012096	-	100	54.122	Maylandia_zebra
ENSFHEG00000019426	alyref	100	81.752	ENSMZEG00005008639	alyref	100	82.847	Maylandia_zebra
ENSFHEG00000019426	alyref	99	84.270	ENSMMOG00000012458	alyref	97	81.481	Mola_mola
ENSFHEG00000019426	alyref	99	46.545	ENSMMOG00000007032	-	98	45.714	Mola_mola
ENSFHEG00000019426	alyref	100	51.049	ENSMALG00000006054	-	100	50.357	Monopterus_albus
ENSFHEG00000019426	alyref	98	56.877	ENSMLUG00000022178	-	98	56.877	Myotis_lucifugus
ENSFHEG00000019426	alyref	98	55.914	ENSMLUG00000022467	-	98	53.405	Myotis_lucifugus
ENSFHEG00000019426	alyref	98	54.480	ENSMLUG00000028605	-	98	53.791	Myotis_lucifugus
ENSFHEG00000019426	alyref	98	53.650	ENSMLUG00000009247	-	98	54.412	Myotis_lucifugus
ENSFHEG00000019426	alyref	100	60.219	ENSMLUG00000014372	-	100	56.934	Myotis_lucifugus
ENSFHEG00000019426	alyref	100	59.058	ENSMLUG00000004098	-	100	56.554	Myotis_lucifugus
ENSFHEG00000019426	alyref	98	57.778	ENSMLUG00000030671	-	99	54.745	Myotis_lucifugus
ENSFHEG00000019426	alyref	100	59.058	ENSMLUG00000006521	-	100	57.664	Myotis_lucifugus
ENSFHEG00000019426	alyref	100	70.896	ENSNGAG00000022014	-	100	65.934	Nannospalax_galili
ENSFHEG00000019426	alyref	100	56.522	ENSNBRG00000017460	-	100	54.710	Neolamprologus_brichardi
ENSFHEG00000019426	alyref	100	80.364	ENSNBRG00000001747	alyref	100	84.364	Neolamprologus_brichardi
ENSFHEG00000019426	alyref	100	57.509	ENSONIG00000003296	-	100	57.509	Oreochromis_niloticus
ENSFHEG00000019426	alyref	100	78.417	ENSONIG00000019434	alyref	100	80.935	Oreochromis_niloticus
ENSFHEG00000019426	alyref	99	41.853	ENSORLG00000001620	-	58	47.887	Oryzias_latipes
ENSFHEG00000019426	alyref	100	49.630	ENSORLG00020015673	-	99	47.038	Oryzias_latipes_hni
ENSFHEG00000019426	alyref	100	87.407	ENSORLG00020011942	alyref	100	89.630	Oryzias_latipes_hni
ENSFHEG00000019426	alyref	100	49.442	ENSORLG00015015143	-	99	48.889	Oryzias_latipes_hsok
ENSFHEG00000019426	alyref	100	88.476	ENSORLG00015022664	alyref	100	87.361	Oryzias_latipes_hsok
ENSFHEG00000019426	alyref	100	89.219	ENSOMEG00000019176	alyref	100	88.060	Oryzias_melastigma
ENSFHEG00000019426	alyref	99	49.259	ENSOMEG00000007158	-	97	46.992	Oryzias_melastigma
ENSFHEG00000019426	alyref	69	78.495	ENSPPAG00000036403	-	68	76.087	Pan_paniscus
ENSFHEG00000019426	alyref	100	74.908	ENSPKIG00000007070	alyref	100	72.491	Paramormyrops_kingsleyae
ENSFHEG00000019426	alyref	99	73.432	ENSPKIG00000006233	-	81	68.635	Paramormyrops_kingsleyae
ENSFHEG00000019426	alyref	99	78.731	ENSPMGG00000016600	alyref	91	76.384	Periophthalmus_magnuspinnatus
ENSFHEG00000019426	alyref	73	50.510	ENSPMGG00000012994	-	97	48.168	Periophthalmus_magnuspinnatus
ENSFHEG00000019426	alyref	100	66.292	ENSPEMG00000016628	-	100	62.774	Peromyscus_maniculatus_bairdii
ENSFHEG00000019426	alyref	100	81.685	ENSPFOG00000022825	alyref	99	81.919	Poecilia_formosa
ENSFHEG00000019426	alyref	100	46.763	ENSPFOG00000017094	-	100	45.756	Poecilia_formosa
ENSFHEG00000019426	alyref	100	46.763	ENSPLAG00000014380	-	100	45.756	Poecilia_latipinna
ENSFHEG00000019426	alyref	100	81.985	ENSPLAG00000006948	alyref	100	82.593	Poecilia_latipinna
ENSFHEG00000019426	alyref	100	46.763	ENSPMEG00000023039	-	100	45.756	Poecilia_mexicana
ENSFHEG00000019426	alyref	100	81.685	ENSPMEG00000003547	alyref	100	81.919	Poecilia_mexicana
ENSFHEG00000019426	alyref	100	50.000	ENSPREG00000003649	-	100	47.212	Poecilia_reticulata
ENSFHEG00000019426	alyref	100	82.353	ENSPREG00000015795	alyref	100	82.963	Poecilia_reticulata
ENSFHEG00000019426	alyref	99	51.590	ENSPNYG00000002879	-	98	52.381	Pundamilia_nyererei
ENSFHEG00000019426	alyref	100	81.752	ENSPNYG00000017498	alyref	100	82.847	Pundamilia_nyererei
ENSFHEG00000019426	alyref	100	74.275	ENSPNAG00000002531	alyref	100	72.101	Pygocentrus_nattereri
ENSFHEG00000019426	alyref	72	76.531	ENSSBOG00000030924	-	87	74.611	Saimiri_boliviensis_boliviensis
ENSFHEG00000019426	alyref	99	57.303	ENSSHAG00000012866	-	99	52.809	Sarcophilus_harrisii
ENSFHEG00000019426	alyref	99	55.914	ENSSHAG00000000609	-	99	52.985	Sarcophilus_harrisii
ENSFHEG00000019426	alyref	91	69.262	ENSSFOG00015003923	alyref	72	75.243	Scleropages_formosus
ENSFHEG00000019426	alyref	69	77.419	ENSSFOG00015003678	alyref	83	75.676	Scleropages_formosus
ENSFHEG00000019426	alyref	100	79.562	ENSSMAG00000009283	alyref	100	79.927	Scophthalmus_maximus
ENSFHEG00000019426	alyref	100	52.297	ENSSMAG00000011169	-	100	55.000	Scophthalmus_maximus
ENSFHEG00000019426	alyref	100	82.784	ENSSDUG00000016158	alyref	100	84.615	Seriola_dumerili
ENSFHEG00000019426	alyref	100	85.036	ENSSLDG00000017803	alyref	100	85.401	Seriola_lalandi_dorsalis
ENSFHEG00000019426	alyref	99	54.412	ENSSPAG00000017028	-	96	54.444	Stegastes_partitus
ENSFHEG00000019426	alyref	100	50.352	ENSTRUG00000003051	-	100	50.719	Takifugu_rubripes
ENSFHEG00000019426	alyref	100	50.903	ENSTNIG00000014136	-	100	47.407	Tetraodon_nigroviridis
ENSFHEG00000019426	alyref	100	75.273	ENSTNIG00000011595	alyref	100	69.455	Tetraodon_nigroviridis
ENSFHEG00000019426	alyref	70	78.947	ENSVVUG00000000272	-	82	77.005	Vulpes_vulpes
ENSFHEG00000019426	alyref	99	80.150	ENSXCOG00000018047	alyref	99	82.222	Xiphophorus_couchianus
ENSFHEG00000019426	alyref	100	47.482	ENSXMAG00000018086	-	100	46.494	Xiphophorus_maculatus
ENSFHEG00000019426	alyref	99	80.524	ENSXMAG00000012218	alyref	99	82.593	Xiphophorus_maculatus