EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000019455 (Gene tree)
Gene ID: 105927997
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 9673 bases
Position: chrKN811317.1:154806-164478
Accession: 105927997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000032768	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000034070	-	543	-	ENSFHEP00000017662	180 (aa)	-	-
ENSFHET00000026424	-	2781	-	ENSFHEP00000032758	192 (aa)	-	UPI000B38B34B
ENSFHET00000026397	-	1049	-	ENSFHEP00000032750	269 (aa)	-	-
ENSFHET00000026429	-	2440	XM_021317787	ENSFHEP00000032759	192 (aa)	XP_021173462	UPI000B38B34B
ENSFHET00000026446	-	2387	XM_012865051	ENSFHEP00000032768	204 (aa)	XP_012720505	UPI000644B5ED

Gene Model

Click here to download ENSFHEG00000019455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000019455	rab18a	93	45.596	ENSFHEG00000014924	rab1ba	80	50.000
ENSFHEG00000019455	rab18a	83	38.728	ENSFHEG00000015996	RAB41	79	38.728
ENSFHEG00000019455	rab18a	74	30.968	ENSFHEG00000015993	RAB29	76	30.968
ENSFHEG00000019455	rab18a	99	37.559	ENSFHEG00000014186	rab25a	76	43.210
ENSFHEG00000019455	rab18a	93	46.429	ENSFHEG00000022985	rab1ab	88	48.333
ENSFHEG00000019455	rab18a	79	37.349	ENSFHEG00000021111	rab9a	82	37.349
ENSFHEG00000019455	rab18a	95	45.146	ENSFHEG00000001296	rab2a	78	51.807
ENSFHEG00000019455	rab18a	83	39.181	ENSFHEG00000001477	-	66	39.181
ENSFHEG00000019455	rab18a	83	39.181	ENSFHEG00000022524	rab6bb	80	39.181
ENSFHEG00000019455	rab18a	71	40.816	ENSFHEG00000011483	zgc:101559	63	40.816
ENSFHEG00000019455	rab18a	71	42.857	ENSFHEG00000022141	rab33a	62	42.857
ENSFHEG00000019455	rab18a	79	45.679	ENSFHEG00000019668	rab11a	75	45.679
ENSFHEG00000019455	rab18a	84	36.047	ENSFHEG00000023069	rab23	72	36.047
ENSFHEG00000019455	rab18a	75	33.974	ENSFHEG00000006551	rab36	58	33.974
ENSFHEG00000019455	rab18a	79	46.296	ENSFHEG00000018353	rab11bb	74	46.296
ENSFHEG00000019455	rab18a	83	40.116	ENSFHEG00000002885	-	81	40.116
ENSFHEG00000019455	rab18a	77	30.247	ENSFHEG00000008212	rhebl1	85	31.013
ENSFHEG00000019455	rab18a	88	42.703	ENSFHEG00000021221	rab13	89	45.732
ENSFHEG00000019455	rab18a	80	32.927	ENSFHEG00000009108	kras	93	32.000
ENSFHEG00000019455	rab18a	51	57.692	ENSFHEG00000000767	si:dkey-16l2.16	67	57.692
ENSFHEG00000019455	rab18a	79	43.827	ENSFHEG00000003018	rab25b	81	44.025
ENSFHEG00000019455	rab18a	80	42.424	ENSFHEG00000015268	-	75	42.424
ENSFHEG00000019455	rab18a	82	44.643	ENSFHEG00000009378	rab15	77	44.643
ENSFHEG00000019455	rab18a	79	46.296	ENSFHEG00000022676	-	74	46.296
ENSFHEG00000019455	rab18a	79	48.780	ENSFHEG00000004319	rab12	67	48.780
ENSFHEG00000019455	rab18a	85	35.227	ENSFHEG00000013691	rab34a	68	35.227
ENSFHEG00000019455	rab18a	90	40.642	ENSFHEG00000014070	rab5aa	86	40.642
ENSFHEG00000019455	rab18a	79	37.349	ENSFHEG00000009417	rab9b	75	37.349
ENSFHEG00000019455	rab18a	84	38.728	ENSFHEG00000020877	RAB39B	81	38.728
ENSFHEG00000019455	rab18a	95	45.918	ENSFHEG00000014414	-	85	49.133
ENSFHEG00000019455	rab18a	77	32.099	ENSFHEG00000003799	rheb	86	32.099
ENSFHEG00000019455	rab18a	66	47.059	ENSFHEG00000018450	RAB14	69	47.059
ENSFHEG00000019455	rab18a	95	36.321	ENSFHEG00000006820	rab33ba	70	39.053
ENSFHEG00000019455	rab18a	79	51.852	ENSFHEG00000022176	zgc:171927	75	51.852
ENSFHEG00000019455	rab18a	80	37.725	ENSFHEG00000005588	RAB7A	74	37.725
ENSFHEG00000019455	rab18a	72	38.926	ENSFHEG00000002502	si:dkey-13a21.4	73	38.926
ENSFHEG00000019455	rab18a	80	37.725	ENSFHEG00000007101	RAB7A	81	37.725
ENSFHEG00000019455	rab18a	79	46.296	ENSFHEG00000022642	rab11ba	75	45.732
ENSFHEG00000019455	rab18a	80	42.515	ENSFHEG00000012041	si:dkey-34d22.5	75	42.515
ENSFHEG00000019455	rab18a	80	47.273	ENSFHEG00000000695	-	76	47.273
ENSFHEG00000019455	rab18a	80	40.606	ENSFHEG00000012702	rab22a	85	40.606
ENSFHEG00000019455	rab18a	82	35.294	ENSFHEG00000004875	si:ch73-116o1.2	81	35.294
ENSFHEG00000019455	rab18a	79	31.098	ENSFHEG00000016504	si:cabz01085950.1	81	31.098
ENSFHEG00000019455	rab18a	89	43.478	ENSFHEG00000010509	rab4a	86	43.478
ENSFHEG00000019455	rab18a	80	43.636	ENSFHEG00000012117	rab5c	81	41.667
ENSFHEG00000019455	rab18a	94	35.385	ENSFHEG00000018764	RAB9A	79	37.647
ENSFHEG00000019455	rab18a	84	50.289	ENSFHEG00000013918	rab30	84	50.289
ENSFHEG00000019455	rab18a	81	32.530	ENSFHEG00000010055	hrasb	87	32.530
ENSFHEG00000019455	rab18a	77	42.405	ENSFHEG00000014087	RAB15	78	41.463
ENSFHEG00000019455	rab18a	90	42.391	ENSFHEG00000000832	rab11al	88	42.391
ENSFHEG00000019455	rab18a	82	35.928	ENSFHEG00000015015	rabl2	62	35.928
ENSFHEG00000019455	rab18a	80	40.606	ENSFHEG00000013106	rab42a	76	40.606
ENSFHEG00000019455	rab18a	99	82.843	ENSFHEG00000020035	rab18b	91	86.096
ENSFHEG00000019455	rab18a	84	47.674	ENSFHEG00000004891	rab35b	88	50.307
ENSFHEG00000019455	rab18a	75	35.032	ENSFHEG00000004532	rab34b	60	35.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019455	rab18a	100	96.078	ENSAPOG00000010760	rab18a	94	96.875	Acanthochromis_polyacanthus
ENSFHEG00000019455	rab18a	100	85.294	ENSACIG00000009617	rab18a	100	85.294	Amphilophus_citrinellus
ENSFHEG00000019455	rab18a	100	96.569	ENSAOCG00000016233	rab18a	100	96.569	Amphiprion_ocellaris
ENSFHEG00000019455	rab18a	100	96.569	ENSAPEG00000005392	rab18a	100	96.569	Amphiprion_percula
ENSFHEG00000019455	rab18a	100	94.608	ENSATEG00000021911	rab18a	94	95.312	Anabas_testudineus
ENSFHEG00000019455	rab18a	100	87.317	ENSACAG00000005463	-	94	88.601	Anolis_carolinensis
ENSFHEG00000019455	rab18a	100	96.078	ENSACLG00000011484	rab18a	100	96.078	Astatotilapia_calliptera
ENSFHEG00000019455	rab18a	96	69.652	ENSCPBG00000027619	-	89	72.778	Chrysemys_picta_bellii
ENSFHEG00000019455	rab18a	100	85.922	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSFHEG00000019455	rab18a	97	74.874	ENSCING00000006838	-	95	76.720	Ciona_intestinalis
ENSFHEG00000019455	rab18a	97	73.869	ENSCSAVG00000010348	-	97	74.611	Ciona_savignyi
ENSFHEG00000019455	rab18a	100	95.098	ENSCSEG00000011816	rab18a	94	95.833	Cynoglossus_semilaevis
ENSFHEG00000019455	rab18a	100	97.059	ENSCVAG00000015451	rab18a	100	97.059	Cyprinodon_variegatus
ENSFHEG00000019455	rab18a	100	81.951	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSFHEG00000019455	rab18a	100	91.220	ENSELUG00000003805	rab18a	93	92.147	Esox_lucius
ENSFHEG00000019455	rab18a	100	96.569	ENSGAFG00000002790	rab18a	100	96.569	Gambusia_affinis
ENSFHEG00000019455	rab18a	100	85.922	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSFHEG00000019455	rab18a	100	96.078	ENSHBUG00000001518	rab18a	100	96.078	Haplochromis_burtoni
ENSFHEG00000019455	rab18a	99	96.059	ENSLBEG00000005861	rab18a	95	96.059	Labrus_bergylta
ENSFHEG00000019455	rab18a	93	88.947	ENSLACG00000009310	rab18a	92	88.947	Latimeria_chalumnae
ENSFHEG00000019455	rab18a	100	88.780	ENSLOCG00000007491	rab18a	93	89.529	Lepisosteus_oculatus
ENSFHEG00000019455	rab18a	100	93.627	ENSMAMG00000014320	rab18a	94	94.271	Mastacembelus_armatus
ENSFHEG00000019455	rab18a	100	95.588	ENSMZEG00005017235	rab18a	94	96.875	Maylandia_zebra
ENSFHEG00000019455	rab18a	100	95.098	ENSMALG00000009813	rab18a	94	95.833	Monopterus_albus
ENSFHEG00000019455	rab18a	100	96.078	ENSNBRG00000013507	rab18a	100	96.078	Neolamprologus_brichardi
ENSFHEG00000019455	rab18a	100	96.569	ENSORLG00000004624	rab18a	100	96.569	Oryzias_latipes
ENSFHEG00000019455	rab18a	100	97.059	ENSORLG00020008333	rab18a	100	97.059	Oryzias_latipes_hni
ENSFHEG00000019455	rab18a	100	96.078	ENSORLG00015004739	rab18a	100	96.078	Oryzias_latipes_hsok
ENSFHEG00000019455	rab18a	100	96.078	ENSOMEG00000020605	rab18a	100	96.078	Oryzias_melastigma
ENSFHEG00000019455	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	91.005	Paramormyrops_kingsleyae
ENSFHEG00000019455	rab18a	100	94.608	ENSPMGG00000020409	-	94	94.792	Periophthalmus_magnuspinnatus
ENSFHEG00000019455	rab18a	100	97.549	ENSPFOG00000007571	rab18a	100	97.549	Poecilia_formosa
ENSFHEG00000019455	rab18a	100	97.549	ENSPLAG00000010104	rab18a	100	97.549	Poecilia_latipinna
ENSFHEG00000019455	rab18a	100	97.549	ENSPMEG00000013085	rab18a	100	97.549	Poecilia_mexicana
ENSFHEG00000019455	rab18a	100	97.549	ENSPREG00000005923	rab18a	83	97.549	Poecilia_reticulata
ENSFHEG00000019455	rab18a	100	96.078	ENSPNYG00000007064	rab18a	100	96.078	Pundamilia_nyererei
ENSFHEG00000019455	rab18a	99	81.592	ENSPNAG00000011548	rab18a	95	84.211	Pygocentrus_nattereri
ENSFHEG00000019455	rab18a	100	90.732	ENSSFOG00015017444	rab18a	78	92.105	Scleropages_formosus
ENSFHEG00000019455	rab18a	94	93.264	ENSSMAG00000002969	rab18a	94	93.264	Scophthalmus_maximus
ENSFHEG00000019455	rab18a	96	95.918	ENSSDUG00000003823	rab18a	96	95.918	Seriola_dumerili
ENSFHEG00000019455	rab18a	96	95.918	ENSSLDG00000006977	rab18a	96	95.918	Seriola_lalandi_dorsalis
ENSFHEG00000019455	rab18a	93	89.418	ENSSPUG00000017677	-	92	88.947	Sphenodon_punctatus
ENSFHEG00000019455	rab18a	100	92.157	ENSTRUG00000004984	rab18a	94	92.708	Takifugu_rubripes
ENSFHEG00000019455	rab18a	100	87.864	ENSUMAG00000015574	-	91	90.426	Ursus_maritimus
ENSFHEG00000019455	rab18a	100	87.864	ENSXETG00000004556	rab18	93	89.583	Xenopus_tropicalis
ENSFHEG00000019455	rab18a	100	97.059	ENSXMAG00000024122	rab18a	100	97.059	Xiphophorus_maculatus